BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921534|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_B06.
         (431 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8LJR6|ATPA2_DINSH ATP synthase subunit alpha 2 OS=Dinoroseob...    30   3.2  
sp|Q1QQS5|ATPA_NITHX ATP synthase subunit alpha OS=Nitrobacter h...    29   7.1  
sp|Q04233|GIS4_YEAST Protein GIS4 OS=Saccharomyces cerevisiae GN...    29   9.3  
sp|Q08908|FRE5_YEAST Ferric reductase transmembrane component 5 ...    29   9.3  

>sp|A8LJR6|ATPA2_DINSH ATP synthase subunit alpha 2
           OS=Dinoroseobacter shibae (strain DFL 12) GN=atpA2 PE=3
           SV=1
          Length = 512

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 93  IHSTNQEQSPTLVDSHGNGGLVHIPMTKTK 4
           +HS   E+S  L D HGNG L  +P+ +T+
Sbjct: 303 LHSRLLERSAKLGDDHGNGSLTALPIIETQ 332


>sp|Q1QQS5|ATPA_NITHX ATP synthase subunit alpha OS=Nitrobacter
           hamburgensis (strain X14 / DSM 10229) GN=atpA PE=3 SV=1
          Length = 510

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 93  IHSTNQEQSPTLVDSHGNGGLVHIPMTKTK 4
           +HS   E++  L D HGNG L  +P+ +T+
Sbjct: 302 LHSRLLERAAKLNDDHGNGSLTALPVIETQ 331


>sp|Q04233|GIS4_YEAST Protein GIS4 OS=Saccharomyces cerevisiae
           GN=GIS4 PE=1 SV=1
          Length = 774

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -3

Query: 234 IIQNFLRYIYEIIKIDHSLLNMSFMHSTCYKHEN 133
           I++ FL+  + + K++H  ++    HS CY HEN
Sbjct: 81  ILEIFLKDYFHLEKLEHIQIS-KLTHSHCYNHEN 113


>sp|Q08908|FRE5_YEAST Ferric reductase transmembrane component 5
           OS=Saccharomyces cerevisiae GN=FRE5 PE=2 SV=1
          Length = 694

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 222 FLRYIYEIIKIDHSLLNMSFMHSTCYKH 139
           F R+ YE+  I H +L + F H+ C+KH
Sbjct: 368 FRRHYYELFVITHIILAIGFFHA-CWKH 394

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921534|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_B06.
         (431 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7HZJ0|A7HZJ0_CAMHC Modification methylase EcoRI (Adenine-spe...    34   4.2  

>tr|A7HZJ0|A7HZJ0_CAMHC Modification methylase EcoRI
           (Adenine-specificmethyltransferase EcoRI) (M.EcoRI)
           OS=Campylobacter hominis (strain ATCC BAA-381 / LMG
           19568 / NCTC 13146 / CH001A) GN=CHAB381_0065 PE=4 SV=1
          Length = 364

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/72 (22%), Positives = 35/72 (48%)
 Frame = -3

Query: 246 CPKPIIQNFLRYIYEIIKIDHSLLNMSFMHSTCYKHENSPICSMRIGS*VEIHSTNQEQS 67
           C  P + NF +Y Y    ++   L +  + +TCYK+++           +++ S N ++ 
Sbjct: 48  CDDPRVSNFFKYFY----LNFDYLELKKLMATCYKNQD-----------IDLFSMNDKEE 92

Query: 66  PTLVDSHGNGGL 31
              ++ +GNG +
Sbjct: 93  AIWLEYNGNGNI 104