BP921535
Clone id YMU001_000151_B07
Library
Length 283
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000151_B07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CACGACCAACAACAAGACGGTGGTGTCGAGAGAAGCCACTCAGGAAGTGATGGTTTACAA
AGGAAGAGTTGGGTTTCAACCTTTCGAAAAGGCTACATGTTGGCTAGGATATAAGGACTT
CCAGTAATCAGCCACAGTGAGCAGAGGACTACTAAAAGCTTCTATAACAACTCCTTCAAC
AGCTAAAATCTGGAATTCCCATAGCAGGTATAAGGGGCAATCAGACATACTCTGAATGTA
GCCTTGTCTTAGTGTGGAAATGGGTTCACAATGATGCACGCCC
■■Homology search results ■■ -
sp_hit_id Q1AVY7
Definition sp|Q1AVY7|PYRC_RUBXD Dihydroorotase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Align length 34
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921535|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_B07.
(283 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q1AVY7|PYRC_RUBXD Dihydroorotase OS=Rubrobacter xylanophilus ... 30 4.9
sp|Q055P8|GCSP_LEPBL Glycine dehydrogenase [decarboxylating] OS=... 29 8.3
sp|Q04PM7|GCSP_LEPBJ Glycine dehydrogenase [decarboxylating] OS=... 29 8.3

>sp|Q1AVY7|PYRC_RUBXD Dihydroorotase OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=pyrC PE=3 SV=1
Length = 436

Score = 29.6 bits (65), Expect = 4.9
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +1

Query: 49 DGLQRKSWVSTFRKGYMLARI*GLPVISHSEQRT 150
DGL +S R G + AR GLPVI H E RT
Sbjct: 158 DGLGTQS-AGVLRNGMLYARSAGLPVILHCEDRT 190


>sp|Q055P8|GCSP_LEPBL Glycine dehydrogenase [decarboxylating]
OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain
L550) GN=gcvP PE=3 SV=1
Length = 964

Score = 28.9 bits (63), Expect = 8.3
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Frame = -2

Query: 219 CPLYLLWEFQILAVEGVVIEAFSSPL--------LTVADYWKSLYPSQHVAF 88
C LL +IL V+ ++ +PL +T +D W LYP + A+
Sbjct: 876 CEAMLLIHQEILDVQNGTLDKIDNPLKNSPHTAAMTTSDRWDHLYPKERAAY 927


>sp|Q04PM7|GCSP_LEPBJ Glycine dehydrogenase [decarboxylating]
OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain
JB197) GN=gcvP PE=3 SV=1
Length = 964

Score = 28.9 bits (63), Expect = 8.3
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Frame = -2

Query: 219 CPLYLLWEFQILAVEGVVIEAFSSPL--------LTVADYWKSLYPSQHVAF 88
C LL +IL V+ ++ +PL +T +D W LYP + A+
Sbjct: 876 CEAMLLIHQEILDVQNGTLDKIDNPLKNSPHTAAMTTSDRWDHLYPKERAAY 927


tr_hit_id Q1MI98
Definition tr|Q1MI98|Q1MI98_RHIL3 Putative lipase/esterase OS=Rhizobium leguminosarum bv. viciae (strain 3841)
Align length 35
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921535|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_B07.
(283 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1MI98|Q1MI98_RHIL3 Putative lipase/esterase OS=Rhizobium leg... 33 9.3

>tr|Q1MI98|Q1MI98_RHIL3 Putative lipase/esterase OS=Rhizobium
leguminosarum bv. viciae (strain 3841) GN=RL1817 PE=4
SV=1
Length = 320

Score = 32.7 bits (73), Expect = 9.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1

Query: 4 DQQQDGGVERSHSGSDGLQRKSWVSTFRKGYMLAR 108
D GG S++GSD L K W+ T RK Y+ +R
Sbjct: 195 DLAATGGSMSSNAGSDPLVGKDWIETLRKTYLRSR 229