BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921543|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_C03.
         (428 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4P965|VTS1_USTMA Protein VTS1 OS=Ustilago maydis GN=VTS1 PE=...    38   0.020
sp|Q5BK24|CH076_RAT Uncharacterized protein C8orf76 homolog OS=R...    30   4.1  
sp|P55620|Y4PO_RHISN Probable transposase for insertion sequence...    29   9.1  

>sp|Q4P965|VTS1_USTMA Protein VTS1 OS=Ustilago maydis GN=VTS1 PE=3
           SV=1
          Length = 728

 Score = 37.7 bits (86), Expect = 0.020
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = +2

Query: 317 SGNGLSRDFGRNGPNKGITATSANRDSNANTIHMP 421
           SG G S +FGR G N G++A   N DSN+N  ++P
Sbjct: 437 SGWGQSDNFGRGGLNTGLSAFGGNNDSNSNQFNIP 471


>sp|Q5BK24|CH076_RAT Uncharacterized protein C8orf76 homolog
           OS=Rattus norvegicus PE=2 SV=1
          Length = 374

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = +2

Query: 158 QKPERQLFPPSGKWADLCPLGS*QNRLFDFWADWFFPKTEARS*WLAMTYKPSSGN 325
           QKPERQ  PPS   A LC               WF+ +TE+ +    +T K   G+
Sbjct: 19  QKPERQPEPPSSYGAKLCE------------PQWFYEETESSNDIEVLTLKKFRGD 62


>sp|P55620|Y4PO_RHISN Probable transposase for insertion sequence
           element ISRM3-like OS=Rhizobium sp. (strain NGR234)
           GN=y4pO PE=3 SV=1
          Length = 400

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = +3

Query: 252 LIGSFLKQKQEANGWL*LTNPLQAMDCQETLVEMV 356
           ++G +++Q + A  WL + N L++  CQ+ L+ +V
Sbjct: 196 ILGLWIEQTEGAKFWLRVMNELKSRGCQDILIAVV 230

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921543|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_C03.
         (428 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A0E5Y4|A0E5Y4_PARTE Chromosome undetermined scaffold_8, whole...    33   9.4  

>tr|A0E5Y4|A0E5Y4_PARTE Chromosome undetermined scaffold_8, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00003564001 PE=4 SV=1
          Length = 351

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -3

Query: 117 ISRCTRSRNHQYLTSWVVTLPIDFI--YVYMFLHKNKCF 7
           +S C   RN++Y   WV TL +  I  Y+ +F H  K F
Sbjct: 80  MSNCIGQRNYRYFIGWVYTLVLQCIIWYIVLFQHTYKTF 118