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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921556
Clone id YMU001_000151_D08
Library
Length 510
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000151_D08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CAGGCCTGTTCTGCATCATTACGATGGGCCCAAATTCAGACTGCAGTTATCTATTCCTGA
GACTTTGGCTTTACTAGATCTGTTCAATGAGCGCAGCTCCAGATGAAGTTGACAGGATGT
TAGAGATGATATGGCTTGCTCAGTACAAATCTGACAGCAGGAATAAGTCAATATGGTGAC
GATGCAACTCTGCTGTTTCAGGTGTCTCATACAGGAACAAGGATATAAAAACGAAGGTGA
GCGCATTTCTAGATGAGGATCATGCCCCTCAGCATACGATCTTGTCCAATCACATTGTAG
TTTAAATTTTGCTAGGTAGACATACGATCGTGTCTCGTGGGCATGTTGTAGTATTTAATC
AATACTATGCATGCTGAAGTTGATGGTTATATTGTCTTATGGGTCACTACCATGAGTCTA
TAGCTGCACTTTCCTTCATAGTGAACTTGGGCTCTTCCTAAATTCATCTAGGTATACATA
TACAATCGCGTCTAGCATTACGAAGGAATG
■■Homology search results ■■ -
sp_hit_id P37707
Definition sp|P37707|B2_DAUCA B2 protein OS=Daucus carota
Align length 30
Score (bit) 56.2
E-value 9.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921556|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_D08.
         (510 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P37707|B2_DAUCA B2 protein OS=Daucus carota PE=2 SV=1               56   9e-08
sp|Q8IYI8|ZN440_HUMAN Zinc finger protein 440 OS=Homo sapiens GN...    36   0.12 
sp|Q9UC07|ZNF69_HUMAN Zinc finger protein 69 OS=Homo sapiens GN=...    33   1.0  
sp|Q8TA94|ZN563_HUMAN Zinc finger protein 563 OS=Homo sapiens GN...    30   5.0  
sp|Q6KAS7|ZN521_MOUSE Zinc finger protein 521 OS=Mus musculus GN...    30   8.5  
sp|Q96K83|ZN521_HUMAN Zinc finger protein 521 OS=Homo sapiens GN...    30   8.5  

>sp|P37707|B2_DAUCA B2 protein OS=Daucus carota PE=2 SV=1
          Length = 207

 Score = 56.2 bits (134), Expect = 9e-08
 Identities = 22/30 (73%), Positives = 28/30 (93%)
 Frame = +2

Query: 2   RPVLHHYDGPKFRLQLSIPETLALLDLFNE 91
           RP+LHHYDGPKFRL+L+IPE ++LLD+F E
Sbjct: 175 RPILHHYDGPKFRLELNIPEAISLLDIFEE 204


>sp|Q8IYI8|ZN440_HUMAN Zinc finger protein 440 OS=Homo sapiens
           GN=ZNF440 PE=2 SV=1
          Length = 595

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 19/41 (46%), Positives = 26/41 (63%)
 Frame = -1

Query: 156 CQICTEQAISSLTSCQLHLELRSLNRSSKAKVSGIDNCSLN 34
           C+ C + A+SSLTS Q H+ L S  R  + K+ G D CS+N
Sbjct: 314 CKQCGK-ALSSLTSFQTHVRLHSGERPYECKICGKDFCSVN 353


>sp|Q9UC07|ZNF69_HUMAN Zinc finger protein 69 OS=Homo sapiens
           GN=ZNF69 PE=2 SV=2
          Length = 566

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -1

Query: 165 YSCCQICTEQAISSLTSCQLHLELRSLNRSSKAKVSGIDNCSLN 34
           Y C Q    +A+SSLTS Q H+ + S  R  + K+ G   CS N
Sbjct: 332 YECTQC--GKALSSLTSFQTHIRMHSGERPYECKICGKGFCSAN 373


>sp|Q8TA94|ZN563_HUMAN Zinc finger protein 563 OS=Homo sapiens
           GN=ZNF563 PE=2 SV=1
          Length = 476

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 11/92 (11%)
 Frame = -1

Query: 297 QCDWTRSYAEGHDPHLEMRS-----------PSFLYPCSCMRHLKQQSCIVTILTYSCCQ 151
           QC  T S++     H+ M +            +F+YP  C RH K  S       Y C Q
Sbjct: 369 QCGKTLSHSSSFRRHMIMHTGGGPHKCKICGKAFVYPSVCQRHEKSHS---GEKPYECKQ 425

Query: 150 ICTEQAISSLTSCQLHLELRSLNRSSKAKVSG 55
               +A+S  +S + H+ + + +  +K KV G
Sbjct: 426 --CGKALSHSSSFRRHMVMHTGDGPNKCKVCG 455


>sp|Q6KAS7|ZN521_MOUSE Zinc finger protein 521 OS=Mus musculus
           GN=Znf521 PE=2 SV=2
          Length = 1311

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -1

Query: 171 LTYSCCQICTEQAISSLTSCQLHLELRSLNRSSKAKV 61
           +TYSC   C +Q  SSL   Q+HL+   L++  +A +
Sbjct: 403 VTYSCIY-CNKQLFSSLAVLQIHLKTMHLDKPEQAHI 438


>sp|Q96K83|ZN521_HUMAN Zinc finger protein 521 OS=Homo sapiens
           GN=ZNF521 PE=1 SV=1
          Length = 1311

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -1

Query: 171 LTYSCCQICTEQAISSLTSCQLHLELRSLNRSSKAKV 61
           +TYSC   C +Q  SSL   Q+HL+   L++  +A +
Sbjct: 403 VTYSCIY-CNKQLFSSLAVLQIHLKTMHLDKPEQAHI 438
tr_hit_id A9NP04
Definition tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 30
Score (bit) 62.8
E-value 9.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921556|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_D08.
         (510 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea...    63   9e-09
tr|A7QU74|A7QU74_VITVI Chromosome chr2 scaffold_176, whole genom...    59   1e-07
tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea...    59   2e-07
tr|A7Q7R8|A7Q7R8_VITVI Chromosome chr18 scaffold_61, whole genom...    59   2e-07
tr|A5AK97|A5AK97_VITVI Putative uncharacterized protein OS=Vitis...    59   2e-07
tr|A9T5I7|A9T5I7_PHYPA Predicted protein OS=Physcomitrella paten...    58   2e-07
tr|A9PHN9|A9PHN9_POPTR Putative uncharacterized protein OS=Popul...    57   4e-07
tr|Q9FHX9|Q9FHX9_ARATH Arabidopsis thaliana genomic DNA, chromos...    56   1e-06
tr|Q9AYM6|Q9AYM6_VIGUN CPRD48 protein (Fragment) OS=Vigna unguic...    56   1e-06
tr|Q8RXN8|Q8RXN8_ARATH Putative uncharacterized protein At5g4205...    56   1e-06
tr|Q5JZR1|Q5JZR1_SOYBN N-rich protein OS=Glycine max GN=nrp PE=2...    56   1e-06
tr|Q9LSC7|Q9LSC7_ARATH Similarity to unknown protein (AT3g27090/...    55   2e-06
tr|Q8LBT1|Q8LBT1_ARATH Gda-1, putative OS=Arabidopsis thaliana P...    55   2e-06
tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solan...    55   2e-06
tr|Q8L6E9|Q8L6E9_PEA GDA2 protein OS=Pisum sativum GN=gda2 PE=2 ...    55   3e-06
tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citru...    55   3e-06
tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medic...    55   3e-06
tr|Q6L4U7|Q6L4U7_ORYSJ Os05g0498700 protein OS=Oryza sativa subs...    54   4e-06
tr|B8AZL0|B8AZL0_ORYSI Putative uncharacterized protein OS=Oryza...    54   4e-06
tr|B8A073|B8A073_MAIZE Putative uncharacterized protein OS=Zea m...    54   4e-06
tr|B7ZYQ7|B7ZYQ7_MAIZE Putative uncharacterized protein OS=Zea m...    54   4e-06
tr|B6TMX1|B6TMX1_MAIZE N-rich protein OS=Zea mays PE=2 SV=1            54   4e-06
tr|B6TDG4|B6TDG4_MAIZE Gda-1 OS=Zea mays PE=2 SV=1                     54   4e-06
tr|B6T8N2|B6T8N2_MAIZE Gda-1 OS=Zea mays PE=2 SV=1                     54   4e-06
tr|B4FUR5|B4FUR5_MAIZE Putative uncharacterized protein OS=Zea m...    54   4e-06
tr|B4F858|B4F858_MAIZE Putative uncharacterized protein OS=Zea m...    54   4e-06
tr|Q5TKG4|Q5TKG4_ORYSJ Os05g0594100 protein OS=Oryza sativa subs...    53   7e-06
tr|A6N0R0|A6N0R0_ORYSI N-rich protein (Fragment) OS=Oryza sativa...    53   7e-06
tr|A3B7F0|A3B7F0_ORYSJ Putative uncharacterized protein OS=Oryza...    53   7e-06
tr|A2Y853|A2Y853_ORYSI Putative uncharacterized protein OS=Oryza...    53   7e-06

>tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 273

 Score = 62.8 bits (151), Expect = 9e-09
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = +2

Query: 2   RPVLHHYDGPKFRLQLSIPETLALLDLFNE 91
           RP+LHHYDGPKFRLQLS+PETLALLDLF E
Sbjct: 241 RPILHHYDGPKFRLQLSVPETLALLDLFEE 270


>tr|A7QU74|A7QU74_VITVI Chromosome chr2 scaffold_176, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00006725001
           PE=4 SV=1
          Length = 94

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = +2

Query: 2   RPVLHHYDGPKFRLQLSIPETLALLDLFNE 91
           RPVLHHYDGPKFRL+L++PE L+LLD+FNE
Sbjct: 62  RPVLHHYDGPKFRLELNVPEALSLLDIFNE 91


>tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 282

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +2

Query: 2   RPVLHHYDGPKFRLQLSIPETLALLDL 82
           RPVLHHYDGPKFRLQLSIPETLAL+DL
Sbjct: 250 RPVLHHYDGPKFRLQLSIPETLALMDL 276


>tr|A7Q7R8|A7Q7R8_VITVI Chromosome chr18 scaffold_61, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00031971001
           PE=4 SV=1
          Length = 215

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +2

Query: 2   RPVLHHYDGPKFRLQLSIPETLALLDLFNE 91
           RP+L+HYDGPKFRLQLS+PE LALLDLF E
Sbjct: 183 RPILYHYDGPKFRLQLSVPEALALLDLFEE 212


>tr|A5AK97|A5AK97_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_040037 PE=4 SV=1
          Length = 217

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +2

Query: 2   RPVLHHYDGPKFRLQLSIPETLALLDLFNE 91
           RP+L+HYDGPKFRLQLS+PE LALLDLF E
Sbjct: 185 RPILYHYDGPKFRLQLSVPEALALLDLFEE 214


>tr|A9T5I7|A9T5I7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_191832 PE=4 SV=1
          Length = 177

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = +2

Query: 2   RPVLHHYDGPKFRLQLSIPETLALLDLFNE 91
           RPVLHHYDGPKFRLQLS+PE + LLDLF E
Sbjct: 144 RPVLHHYDGPKFRLQLSVPEAVELLDLFEE 173


>tr|A9PHN9|A9PHN9_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 390

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = +2

Query: 2   RPVLHHYDGPKFRLQLSIPETLALLDLFNE 91
           RPVLHHYDGPKFRL+L+IPE L+LLD+F E
Sbjct: 358 RPVLHHYDGPKFRLELNIPEALSLLDIFEE 387


>tr|Q9FHX9|Q9FHX9_ARATH Arabidopsis thaliana genomic DNA, chromosome
           5, P1 clone:MJC20 OS=Arabidopsis thaliana PE=4 SV=1
          Length = 204

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 22/28 (78%), Positives = 27/28 (96%)
 Frame = +2

Query: 2   RPVLHHYDGPKFRLQLSIPETLALLDLF 85
           RP+LHHYDGPKFRL+LS+PE L+LLD+F
Sbjct: 172 RPILHHYDGPKFRLELSVPEVLSLLDIF 199


>tr|Q9AYM6|Q9AYM6_VIGUN CPRD48 protein (Fragment) OS=Vigna
           unguiculata GN=CPRD48 PE=2 SV=1
          Length = 71

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 22/30 (73%), Positives = 28/30 (93%)
 Frame = +2

Query: 2   RPVLHHYDGPKFRLQLSIPETLALLDLFNE 91
           RP+LHHYDGPKFRL+L++PE L+LLD+F E
Sbjct: 29  RPILHHYDGPKFRLELNVPEALSLLDIFAE 58


>tr|Q8RXN8|Q8RXN8_ARATH Putative uncharacterized protein At5g42050
           (Putative uncharacterized protein) OS=Arabidopsis
           thaliana GN=At5g42050 PE=2 SV=1
          Length = 349

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 22/28 (78%), Positives = 27/28 (96%)
 Frame = +2

Query: 2   RPVLHHYDGPKFRLQLSIPETLALLDLF 85
           RP+LHHYDGPKFRL+LS+PE L+LLD+F
Sbjct: 317 RPILHHYDGPKFRLELSVPEVLSLLDIF 344