BP921558 |
Clone id |
YMU001_000151_D12 |
Library |
YMU01 |
Length |
539 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000151_D12. |
Accession |
BP921558 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1710Contig1 |
Sequence |
GAAACAACTGAACTGCCGTCCCTCTGCTGAGCAATAAGTTGGACTTCTTCTCCCAGCAGC TGCTTTCTTTCTACATCCGCATTTAGTACACATTGAAGTATAGTTATGTCATCACCAACC ACCTCCTGCTCAACGTGTAAAATCTGGCAGTTTTTTGGTATGCCATCAATACTATGCATA GCCATGTGCTTCAGGAATGTGGTTTTACCTGTTCCATTCCTCCCAACAAGACCATAGTGT CTGCCATAGGCAAGGGTAACAGATGCTTCTGAGATCAGTTCCCTCCCACCAACAGAAATA CTAAAATTATCCATTCTAATATCCCTAGGGGCAGTTCCTTCATCCCTGTTCCAGTGATTA ACAACAGCTTGAGGCATGTTAGCTTCCAAAGCCTCAACAGCAGCCAAGTGTGCCTCATAC TGAACCTGTCTCTGACGATCATCTTTTCGCTTTTTCCGGTCTATCTTTGCCTTGTCTCTT TCAGATAGGAAAAAGGGAACATCTTCTGCTTGATCAACTTTTACTGGAGACTCCTCTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8H0V6 |
Definition |
sp|Q8H0V6|GCN3_ARATH GCN20-type ATP-binding cassette protein GCN3 OS=Arabidopsis thaliana |
Align length |
174 |
Score (bit) |
175.0 |
E-value |
1.0e-43 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QU38 |
Definition |
tr|A7QU38|A7QU38_VITVI Chromosome chr2 scaffold_176, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
174 |
Score (bit) |
184.0 |
E-value |
2.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921558|Adiantum capillus-veneris mRNA, clone: YMU001_000151_D12. (539 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QU38|A7QU38_VITVI Chromosome chr2 scaffold_176, whole genom... 184 2e-45 tr|A9S4D8|A9S4D8_PHYPA ATP-binding cassette transporter, subfami... 181 2e-44 tr|Q6K7R4|Q6K7R4_ORYSJ Os02g0826500 protein OS=Oryza sativa subs... 179 1e-43 tr|A3ACW9|A3ACW9_ORYSJ Putative uncharacterized protein OS=Oryza... 177 4e-43 tr|Q8W1S2|Q8W1S2_SOYBN ABC transporter-like protein OS=Glycine m... 174 3e-42 tr|B8AF60|B8AF60_ORYSI Putative uncharacterized protein OS=Oryza... 169 7e-41 tr|A7EH59|A7EH59_SCLS1 Putative uncharacterized protein OS=Scler... 110 4e-23 tr|A6RI52|A6RI52_BOTFB Putative uncharacterized protein OS=Botry... 110 4e-23 tr|Q8T6B8|Q8T6B8_DICDI Non-transporter ABC protein AbcF1 (ABC tr... 109 8e-23 tr|A1CGR7|A1CGR7_ASPCL Translation initiation regulator (Gcn20),... 108 2e-22 tr|Q5B565|Q5B565_EMENI Putative uncharacterized protein OS=Emeri... 108 2e-22 tr|A1CY12|A1CY12_NEOFI Translation initiation regulator (Gcn20),... 108 2e-22 tr|Q6BIM3|Q6BIM3_DEBHA DEHA2G09218p OS=Debaryomyces hansenii GN=... 107 3e-22 tr|Q4WNK5|Q4WNK5_ASPFU Translation initiation regulator (Gcn20),... 107 3e-22 tr|B0Y5F1|B0Y5F1_ASPFC Translation initiation regulator (Gcn20),... 107 3e-22 tr|B8NA96|B8NA96_ASPFL Translation initiation regulator (Gcn20),... 106 7e-22 tr|A5DVU4|A5DVU4_LODEL Protein GCN20 OS=Lodderomyces elongisporu... 106 7e-22 tr|B8LTR3|B8LTR3_9EURO Translation initiation regulator (Gcn20),... 106 9e-22 tr|A8Q5M2|A8Q5M2_MALGO Putative uncharacterized protein OS=Malas... 106 9e-22 tr|A3GFD8|A3GFD8_PICST ATP-binding cassette (ABC) family, regula... 106 9e-22 tr|B7PJP5|B7PJP5_IXOSC eIF2-interacting protein ABC50, putative ... 105 2e-21 tr|Q757P4|Q757P4_ASHGO AEL032Wp OS=Ashbya gossypii GN=AEL032W PE... 105 2e-21 tr|B6HF25|B6HF25_PENCH Pc20g00140 protein OS=Penicillium chrysog... 105 2e-21 tr|A6RH16|A6RH16_AJECN Putative uncharacterized protein OS=Ajell... 105 2e-21 tr|Q0CHL8|Q0CHL8_ASPTN Protein GCN20 OS=Aspergillus terreus (str... 104 3e-21 tr|A2R524|A2R524_ASPNC Putative frameshift OS=Aspergillus niger ... 104 3e-21 tr|Q5ABB0|Q5ABB0_CANAL ATP-binding cassette protein OS=Candida a... 104 3e-21 tr|B6Q2M9|B6Q2M9_PENMA Translation initiation regulator (Gcn20),... 104 3e-21 tr|A9VDL9|A9VDL9_MONBE Predicted protein OS=Monosiga brevicollis... 103 7e-21 tr|B2ARF8|B2ARF8_PODAN Predicted CDS Pa_4_7640 OS=Podospora anse... 103 7e-21
>tr|A7QU38|A7QU38_VITVI Chromosome chr2 scaffold_176, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006684001 PE=3 SV=1 Length = 716
Score = 184 bits (468), Expect = 2e-45 Identities = 100/174 (57%), Positives = 118/174 (67%) Frame = -1
Query: 539 EEESPVKVDQAEDVPFFLSEXXXXXXXXXXXXXXXXRQVQYXXXXXXXXXXXANMPQAVV 360 EEE P K + D P L+E R+ QY A MP V Sbjct: 104 EEEVPKKKPEVTDGPI-LTERDRAKLERRKRKDERQREQQYQMHLAEMEAAKAGMPVVCV 162
Query: 359 NHWNRDEGTAPRDIRMDNFSISVGGRELISEASVTLAYGRHYGLVGRNGTGKTTFLKHMA 180 NH N G A +DI ++NF+IS+GGR+LI + SVTL+YGRHYGLVGRNGTGKTTFL++MA Sbjct: 163 NHDN-SSGPAIKDIHLENFNISIGGRDLIVDGSVTLSYGRHYGLVGRNGTGKTTFLRYMA 221
Query: 179 MHSIDGIPKNCQILHVEQEVVGDDITILQCVLNADVERKQLLGEEVQLIAQQRD 18 MH+IDGIPKNCQILHVEQEVVGDDI+ LQCVLN D+ER QLL EE L+AQQR+ Sbjct: 222 MHAIDGIPKNCQILHVEQEVVGDDISALQCVLNTDIERTQLLEEEAHLLAQQRE 275
>tr|A9S4D8|A9S4D8_PHYPA ATP-binding cassette transporter, subfamily F, member 1 protein PpABCF1 OS=Physcomitrella patens subsp. patens GN=ppabcf1 PE=3 SV=1 Length = 726
Score = 181 bits (459), Expect = 2e-44 Identities = 87/118 (73%), Positives = 101/118 (85%) Frame = -1
Query: 377 MPQAVVNHWNRDEGTAPRDIRMDNFSISVGGRELISEASVTLAYGRHYGLVGRNGTGKTT 198 MP +VNH EG +DIRM+NFSIS+GGRELI+EA+VTLA+GR YGLVGRNGTGKTT Sbjct: 162 MPAVMVNHGGVGEGAVAKDIRMENFSISMGGRELINEATVTLAHGRRYGLVGRNGTGKTT 221
Query: 197 FLKHMAMHSIDGIPKNCQILHVEQEVVGDDITILQCVLNADVERKQLLGEEVQLIAQQ 24 LKHMAMH+IDGIP+NCQILHVEQEVVGDD T+LQCVL++DVERK L+ EE QL Q+ Sbjct: 222 LLKHMAMHAIDGIPRNCQILHVEQEVVGDDTTVLQCVLDSDVERKLLMEEEAQLAQQK 279
>tr|Q6K7R4|Q6K7R4_ORYSJ Os02g0826500 protein OS=Oryza sativa subsp. japonica GN=P0452F04.18-1 PE=3 SV=1 Length = 692
Score = 179 bits (453), Expect = 1e-43 Identities = 89/137 (64%), Positives = 104/137 (75%) Frame = -1
Query: 428 QVQYXXXXXXXXXXXANMPQAVVNHWNRDEGTAPRDIRMDNFSISVGGRELISEASVTLA 249 + QY A MP VNH N G A RDI M+NFS++VGGR+LI + +VTLA Sbjct: 147 EAQYQTHVAEMEALRAGMPPVFVNH-NNSGGPAVRDIHMENFSVTVGGRDLIQDCTVTLA 205
Query: 248 YGRHYGLVGRNGTGKTTFLKHMAMHSIDGIPKNCQILHVEQEVVGDDITILQCVLNADVE 69 +GRHYGLVGRNGTGKT+FL+ MAMH+IDGIPKNCQILHVEQEVVGDD T LQCVLNAD+E Sbjct: 206 FGRHYGLVGRNGTGKTSFLRAMAMHAIDGIPKNCQILHVEQEVVGDDTTALQCVLNADIE 265
Query: 68 RKQLLGEEVQLIAQQRD 18 R QLL EE L+ +Q+D Sbjct: 266 RVQLLQEEAHLVQRQKD 282
>tr|A3ACW9|A3ACW9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_008641 PE=3 SV=1 Length = 691
Score = 177 bits (448), Expect = 4e-43 Identities = 89/137 (64%), Positives = 103/137 (75%) Frame = -1
Query: 428 QVQYXXXXXXXXXXXANMPQAVVNHWNRDEGTAPRDIRMDNFSISVGGRELISEASVTLA 249 + QY A MP VNH N G A RDI M+NFS++VGGR+LI + +VTLA Sbjct: 147 EAQYQTHVAEMEALRAGMPPVFVNH-NNSGGPAVRDIHMENFSVTVGGRDLIQDCTVTLA 205
Query: 248 YGRHYGLVGRNGTGKTTFLKHMAMHSIDGIPKNCQILHVEQEVVGDDITILQCVLNADVE 69 +GRHYGLVGRNGTGKT+FL+ MAMH+IDGIPKNCQILHVEQEVVGDD T LQCVLNAD+E Sbjct: 206 FGRHYGLVGRNGTGKTSFLRAMAMHAIDGIPKNCQILHVEQEVVGDDTTALQCVLNADIE 265
Query: 68 RKQLLGEEVQLIAQQRD 18 R QLL EE L+ +Q D Sbjct: 266 RVQLLQEEAHLVQRQVD 282
>tr|Q8W1S2|Q8W1S2_SOYBN ABC transporter-like protein OS=Glycine max PE=2 SV=1 Length = 636
Score = 174 bits (440), Expect = 3e-42 Identities = 94/172 (54%), Positives = 113/172 (65%) Frame = -1
Query: 533 ESPVKVDQAEDVPFFLSEXXXXXXXXXXXXXXXXRQVQYXXXXXXXXXXXANMPQAVVNH 354 ++P K + D P LSE R+ QY A MP V H Sbjct: 106 QAPKKKPEPVDGPL-LSERDRLKLERRKRKDERQREAQYQMHLAEMEAARAGMPVVCVRH 164
Query: 353 WNRDEGTAPRDIRMDNFSISVGGRELISEASVTLAYGRHYGLVGRNGTGKTTFLKHMAMH 174 N G +DI M+NF+ISVGGR+LI + VTL++GRHYGLVGRNGTGKTTFL+HMAMH Sbjct: 165 DNSG-GPNVKDIHMENFNISVGGRDLIVDGCVTLSFGRHYGLVGRNGTGKTTFLRHMAMH 223
Query: 173 SIDGIPKNCQILHVEQEVVGDDITILQCVLNADVERKQLLGEEVQLIAQQRD 18 +IDG+P+NCQILHVEQEV GD T LQCVLN+D+ER QLL EE QL+AQQR+ Sbjct: 224 AIDGVPRNCQILHVEQEVTGDATTALQCVLNSDIERTQLLDEEAQLVAQQRE 275
>tr|B8AF60|B8AF60_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09528 PE=4 SV=1 Length = 708
Score = 169 bits (429), Expect = 7e-41 Identities = 87/140 (62%), Positives = 103/140 (73%), Gaps = 2/140 (1%) Frame = -1
Query: 428 QVQYXXXXXXXXXXXANMPQAVVNHWNRDEGTAPRDIRMDNFSISVGGRELISEASVTLA 249 + QY A MP VNH N G A RDI M+NFS++VGGR+LI + +VTLA Sbjct: 147 EAQYQTHVAEMEALRAGMPPVFVNH-NNSGGPAVRDIHMENFSVTVGGRDLIQDCTVTLA 205
Query: 248 YGRHYGLVGRNGTGKTTFLKHMAMHSIDGIPKNCQILHVEQEVVGDDITILQCVLNADVE 69 +GRHYGLVGRNGTGKT+FL+ MAMH+IDGIPKNCQILHVEQEVVGDD T LQCVLNAD+E Sbjct: 206 FGRHYGLVGRNGTGKTSFLRAMAMHAIDGIPKNCQILHVEQEVVGDDTTALQCVLNADIE 265
Query: 68 RKQL--LGEEVQLIAQQRDG 15 RK L E Q +++ +DG Sbjct: 266 RKDLEYEAEFEQSVSKSKDG 285
>tr|A7EH59|A7EH59_SCLS1 Putative uncharacterized protein OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_04651 PE=3 SV=1 Length = 748
Score = 110 bits (276), Expect = 4e-23 Identities = 53/108 (49%), Positives = 76/108 (70%) Frame = -1
Query: 341 EGTAPRDIRMDNFSISVGGRELISEASVTLAYGRHYGLVGRNGTGKTTFLKHMAMHSIDG 162 + T +DI++DN +S+GG ++S+ ++TLAYGR YGLVG+NG GK+T L+ +A + Sbjct: 189 QSTKSKDIKVDNIDVSIGGLRILSDTNLTLAYGRRYGLVGQNGIGKSTLLRALARREL-A 247
Query: 161 IPKNCQILHVEQEVVGDDITILQCVLNADVERKQLLGEEVQLIAQQRD 18 +P + ILHVEQE+ GDD LQ VL+ADV RK LL E+V++ Q D Sbjct: 248 VPTHISILHVEQEISGDDTPALQAVLDADVWRKHLLAEQVKISKQLAD 295
>tr|A6RI52|A6RI52_BOTFB Putative uncharacterized protein OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_00123 PE=3 SV=1 Length = 748
Score = 110 bits (276), Expect = 4e-23 Identities = 53/108 (49%), Positives = 76/108 (70%) Frame = -1
Query: 341 EGTAPRDIRMDNFSISVGGRELISEASVTLAYGRHYGLVGRNGTGKTTFLKHMAMHSIDG 162 + T +DI++DN +S+GG ++S+ ++TLAYGR YGLVG+NG GK+T L+ +A + Sbjct: 189 QSTKSKDIKVDNIDVSIGGLRILSDTNLTLAYGRRYGLVGQNGIGKSTLLRALARREL-A 247
Query: 161 IPKNCQILHVEQEVVGDDITILQCVLNADVERKQLLGEEVQLIAQQRD 18 +P + ILHVEQE+ GDD LQ VL+ADV RK LL E+V++ Q D Sbjct: 248 VPTHISILHVEQEISGDDTPALQAVLDADVWRKHLLAEQVKISKQLAD 295
>tr|Q8T6B8|Q8T6B8_DICDI Non-transporter ABC protein AbcF1 (ABC transporter-related protein) OS=Dictyostelium discoideum GN=abcF1 PE=3 SV=1 Length = 708
Score = 109 bits (273), Expect = 8e-23 Identities = 55/99 (55%), Positives = 72/99 (72%) Frame = -1
Query: 326 RDIRMDNFSISVGGRELISEASVTLAYGRHYGLVGRNGTGKTTFLKHMAMHSIDGIPKNC 147 RDI +D F+++ G +LI + + L YGR YGL+GRNGTGKTT L+H+A I GI N Sbjct: 180 RDIHVDAFNVTYGKNDLIINSDLNLNYGRKYGLIGRNGTGKTTLLRHIASREI-GIDNNL 238
Query: 146 QILHVEQEVVGDDITILQCVLNADVERKQLLGEEVQLIA 30 ILHVEQEV G++ T+++CVL ADVER +LL EE +L A Sbjct: 239 SILHVEQEVNGNETTVIECVLEADVERDRLLKEEKRLNA 277
>tr|A1CGR7|A1CGR7_ASPCL Translation initiation regulator (Gcn20), putative OS=Aspergillus clavatus GN=ACLA_045370 PE=3 SV=1 Length = 751
Score = 108 bits (270), Expect = 2e-22 Identities = 53/106 (50%), Positives = 76/106 (71%) Frame = -1
Query: 344 DEGTAPRDIRMDNFSISVGGRELISEASVTLAYGRHYGLVGRNGTGKTTFLKHMAMHSID 165 D + +DI++D+ ISVGG ++++AS+TLAYGR YGLVG+NG GK+T L+ ++ + Sbjct: 191 DSQSKSKDIKIDSIDISVGGLRILTDASLTLAYGRRYGLVGQNGIGKSTLLRALSRREV- 249
Query: 164 GIPKNCQILHVEQEVVGDDITILQCVLNADVERKQLLGEEVQLIAQ 27 IP + ILHVEQE+ GDD LQ VL+ADV RK+LL E+ ++ Q Sbjct: 250 SIPSHISILHVEQEITGDDTPALQAVLDADVWRKRLLAEQEKITKQ 295
|