BP921561 |
Clone id |
YMU001_000151_E03 |
Library |
YMU01 |
Length |
331 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000151_E03. |
Accession |
BP921561 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2264Contig1 |
Sequence |
CTACACAATCCAGCCATGGTAGCCATGGAAGCTTGAGCTTCACCAAGAGATGGGTCAATT TGAGTGGCAAAAGGCTCATCTCACATGAATGAGAACAAGGTACTCGACGCAACCAGGCTC GCTTGACTCGCCTGTCTGGCAGCGTGGGATTCTTATGGGAGAGAGATGTGAGCCTCCGGA CTTCTCGGGGCTCATCTTGTATGATGAACATGGGAATCATGTGCAGGAGTTTCCCTGCAA GTCTCCCAAGTTTTCGGCACAGCGGCCTCTTCCGCTTGTAGTATGACAGGTGAATTGTAT TATTGGAGTAACTTGATATCGAACAAGTATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q01617 |
Definition |
sp|Q01617|CPO_DROME Protein couch potato OS=Drosophila melanogaster |
Align length |
74 |
Score (bit) |
30.8 |
E-value |
2.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P2J3 |
Definition |
tr|A9P2J3|A9P2J3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
59 |
Score (bit) |
66.6 |
E-value |
6.0e-10 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921561|Adiantum capillus-veneris mRNA, clone: YMU001_000151_E03. (331 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P2J3|A9P2J3_PICSI Putative uncharacterized protein OS=Picea... 67 6e-10 tr|A7PGN5|A7PGN5_VITVI Chromosome chr17 scaffold_16, whole genom... 62 1e-08 tr|A5B734|A5B734_VITVI Putative uncharacterized protein OS=Vitis... 57 6e-07 tr|Q6EQW0|Q6EQW0_ORYSJ Putative uncharacterized protein OSJNBa00... 55 1e-06 tr|B8AGB8|B8AGB8_ORYSI Putative uncharacterized protein OS=Oryza... 55 1e-06 tr|B6TSI3|B6TSI3_MAIZE Putative uncharacterized protein OS=Zea m... 55 2e-06 tr|A7P287|A7P287_VITVI Chromosome chr19 scaffold_4, whole genome... 54 5e-06 tr|A5B394|A5B394_VITVI Putative uncharacterized protein OS=Vitis... 54 5e-06 tr|Q9M9A2|Q9M9A2_ARATH F27J15.21 (At1g49000) OS=Arabidopsis thal... 53 7e-06 tr|Q9LH80|Q9LH80_ARATH Gb|AAF43227.1 (Putative uncharacterized p... 53 9e-06 tr|A9P0T1|A9P0T1_PICSI Putative uncharacterized protein OS=Picea... 52 1e-05 tr|A9NQW0|A9NQW0_PICSI Putative uncharacterized protein OS=Picea... 52 1e-05 tr|Q9LII3|Q9LII3_ARATH Gb|AAF43227.1 (AT3g18560/K24M9_5) OS=Arab... 52 2e-05 tr|A5ALY3|A5ALY3_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05 tr|Q6ZIR5|Q6ZIR5_ORYSJ Os02g0711400 protein OS=Oryza sativa subs... 51 3e-05 tr|A9RJL9|A9RJL9_PHYPA Predicted protein OS=Physcomitrella paten... 51 3e-05 tr|A2X8V2|A2X8V2_ORYSI Putative uncharacterized protein OS=Oryza... 51 3e-05 tr|B6SSH2|B6SSH2_MAIZE Putative uncharacterized protein OS=Zea m... 50 4e-05 tr|B6TME4|B6TME4_MAIZE Putative uncharacterized protein OS=Zea m... 49 2e-04 tr|Q6ER70|Q6ER70_ORYSJ Os02g0321600 protein OS=Oryza sativa subs... 48 2e-04 tr|Q656A2|Q656A2_ORYSJ Putative uncharacterized protein P0596H06... 48 2e-04 tr|A2X449|A2X449_ORYSI Putative uncharacterized protein OS=Oryza... 48 2e-04 tr|B6TR43|B6TR43_MAIZE Putative uncharacterized protein OS=Zea m... 47 4e-04 tr|A3AAM8|A3AAM8_ORYSJ Putative uncharacterized protein OS=Oryza... 47 4e-04 tr|B6T735|B6T735_MAIZE Putative uncharacterized protein OS=Zea m... 47 5e-04 tr|Q9M9H2|Q9M9H2_ARATH F14O23.12 (Putative uncharacterized prote... 47 6e-04 tr|B8AX84|B8AX84_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.003 tr|Q6H8C4|Q6H8C4_ORYSJ Putative uncharacterized protein OJ1006_A... 44 0.004 tr|A9T1Z0|A9T1Z0_PHYPA Predicted protein OS=Physcomitrella paten... 44 0.004 tr|A2X2B2|A2X2B2_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.004
>tr|A9P2J3|A9P2J3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 159
Score = 66.6 bits (161), Expect = 6e-10 Identities = 32/59 (54%), Positives = 39/59 (66%) Frame = +2
Query: 92 RTRYSTQPGSLDSPVWQRGILMGERCEPPDFSGLILYDEHGNHVQEFPCKSPKFSAQRP 268 R Q G DS VWQR ILMGERC+PP FSGLI+YD+ GN + +FP +SP + P Sbjct: 97 RAAMEEQEGGGDS-VWQRSILMGERCQPPAFSGLIIYDDKGNRLPQFPPRSPILNIFHP 154
>tr|A7PGN5|A7PGN5_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017622001 PE=4 SV=1 Length = 72
Score = 62.0 bits (149), Expect = 1e-08 Identities = 28/50 (56%), Positives = 35/50 (70%) Frame = +2
Query: 125 DSPVWQRGILMGERCEPPDFSGLILYDEHGNHVQEFPCKSPKFSAQRPLP 274 D VWQR ILMG++C+P DFSG+I YD G +QE P +SP+ S PLP Sbjct: 20 DGGVWQRAILMGDKCQPLDFSGVIYYDNKGEQLQELPLRSPRAS---PLP 66
>tr|A5B734|A5B734_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020012 PE=4 SV=1 Length = 198
Score = 56.6 bits (135), Expect = 6e-07 Identities = 27/55 (49%), Positives = 39/55 (70%) Frame = +2
Query: 110 QPGSLDSPVWQRGILMGERCEPPDFSGLILYDEHGNHVQEFPCKSPKFSAQRPLP 274 + G+ + +WQ+ ILMGERC+ P+FSG+I YD +GN V E P ++P+ S PLP Sbjct: 93 EEGTGEGGLWQKSILMGERCQHPEFSGVIFYDGYGNQVSE-PPRTPRAS---PLP 143
>tr|Q6EQW0|Q6EQW0_ORYSJ Putative uncharacterized protein OSJNBa0086N11.28 OS=Oryza sativa subsp. japonica GN=OSJNBa0086N11.28 PE=4 SV=1 Length = 202
Score = 55.5 bits (132), Expect = 1e-06 Identities = 27/45 (60%), Positives = 30/45 (66%) Frame = +2
Query: 92 RTRYSTQPGSLDSPVWQRGILMGERCEPPDFSGLILYDEHGNHVQ 226 RT P + PVWQR ILMG RCE P FSGLILYDEHG ++ Sbjct: 124 RTPMVAPPMTPMRPVWQRRILMGMRCELPRFSGLILYDEHGRPIR 168
>tr|B8AGB8|B8AGB8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06972 PE=4 SV=1 Length = 195
Score = 55.5 bits (132), Expect = 1e-06 Identities = 27/45 (60%), Positives = 30/45 (66%) Frame = +2
Query: 92 RTRYSTQPGSLDSPVWQRGILMGERCEPPDFSGLILYDEHGNHVQ 226 RT P + PVWQR ILMG RCE P FSGLILYDEHG ++ Sbjct: 125 RTPMVAPPMTPMRPVWQRRILMGMRCELPRFSGLILYDEHGRPIR 169
>tr|B6TSI3|B6TSI3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 226
Score = 55.1 bits (131), Expect = 2e-06 Identities = 24/33 (72%), Positives = 27/33 (81%) Frame = +2
Query: 128 SPVWQRGILMGERCEPPDFSGLILYDEHGNHVQ 226 +PVWQR ILMG RCE P FSG+ILYDEHG +Q Sbjct: 158 TPVWQRRILMGTRCELPRFSGVILYDEHGRPLQ 190
>tr|A7P287|A7P287_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027923001 PE=4 SV=1 Length = 170
Score = 53.5 bits (127), Expect = 5e-06 Identities = 24/34 (70%), Positives = 27/34 (79%) Frame = +2
Query: 128 SPVWQRGILMGERCEPPDFSGLILYDEHGNHVQE 229 SPVWQR ILMGE+CE P FSGLILYDE G + + Sbjct: 116 SPVWQRPILMGEKCELPRFSGLILYDETGQPLHQ 149
>tr|A5B394|A5B394_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026296 PE=4 SV=1 Length = 171
Score = 53.5 bits (127), Expect = 5e-06 Identities = 24/34 (70%), Positives = 27/34 (79%) Frame = +2
Query: 128 SPVWQRGILMGERCEPPDFSGLILYDEHGNHVQE 229 SPVWQR ILMGE+CE P FSGLILYDE G + + Sbjct: 116 SPVWQRPILMGEKCELPRFSGLILYDETGQPLHQ 149
>tr|Q9M9A2|Q9M9A2_ARATH F27J15.21 (At1g49000) OS=Arabidopsis thaliana GN=At1g49000 PE=2 SV=1 Length = 156
Score = 53.1 bits (126), Expect = 7e-06 Identities = 25/47 (53%), Positives = 33/47 (70%) Frame = +2
Query: 134 VWQRGILMGERCEPPDFSGLILYDEHGNHVQEFPCKSPKFSAQRPLP 274 +WQR ILMG +CEP DFSG+I YD +G + E P +SP+ + PLP Sbjct: 107 LWQREILMGGKCEPLDFSGVIYYDSNGRLLNEVPPRSPRGT---PLP 150
>tr|Q9LH80|Q9LH80_ARATH Gb|AAF43227.1 (Putative uncharacterized protein At3g14760) OS=Arabidopsis thaliana GN=At3g14760 PE=2 SV=1 Length = 168
Score = 52.8 bits (125), Expect = 9e-06 Identities = 34/72 (47%), Positives = 40/72 (55%), Gaps = 8/72 (11%) Frame = +2
Query: 26 WKLELHQEMGQFEWQKA-HLT*MRTR-----YSTQPGSLDS--PVWQRGILMGERCEPPD 181 W MG F W A M TR + + SL++ PVWQR ILMGE+CE P Sbjct: 72 WSKVKRTLMGSFCWSSAAKWMEMETRRQPPLLAVKERSLNAVDPVWQRPILMGEKCELPR 131
Query: 182 FSGLILYDEHGN 217 FSGLILYDE G+ Sbjct: 132 FSGLILYDECGH 143
|