BP921561
Clone id YMU001_000151_E03
Library
Length 331
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000151_E03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTACACAATCCAGCCATGGTAGCCATGGAAGCTTGAGCTTCACCAAGAGATGGGTCAATT
TGAGTGGCAAAAGGCTCATCTCACATGAATGAGAACAAGGTACTCGACGCAACCAGGCTC
GCTTGACTCGCCTGTCTGGCAGCGTGGGATTCTTATGGGAGAGAGATGTGAGCCTCCGGA
CTTCTCGGGGCTCATCTTGTATGATGAACATGGGAATCATGTGCAGGAGTTTCCCTGCAA
GTCTCCCAAGTTTTCGGCACAGCGGCCTCTTCCGCTTGTAGTATGACAGGTGAATTGTAT
TATTGGAGTAACTTGATATCGAACAAGTATG
■■Homology search results ■■ -
sp_hit_id Q01617
Definition sp|Q01617|CPO_DROME Protein couch potato OS=Drosophila melanogaster
Align length 74
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921561|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_E03.
(331 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q01617|CPO_DROME Protein couch potato OS=Drosophila melanogas... 31 2.2
sp|Q923L3|CSMD1_MOUSE CUB and sushi domain-containing protein 1 ... 30 3.8
sp|Q9DAF3|DDI1_MOUSE Protein DDI1 homolog 1 OS=Mus musculus GN=D... 30 5.0
sp|Q2FSF9|DP2L_METHJ DNA polymerase II large subunit OS=Methanos... 29 6.4
sp|Q9USD4|ALG12_SCHPO Probable dolichyl-P-Man:Man(7)GlcNAc(2)-PP... 29 8.4
sp|Q8CGK6|IL28B_MOUSE Interleukin-28B OS=Mus musculus GN=Il28b P... 29 8.4
sp|Q59986|IGA1_STRSA Immunoglobulin A1 protease OS=Streptococcus... 29 8.4

>sp|Q01617|CPO_DROME Protein couch potato OS=Drosophila melanogaster
GN=cpo PE=1 SV=3
Length = 738

Score = 30.8 bits (68), Expect = 2.2
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Frame = -3

Query: 296 NSPVILQAEEAAVPKTWETCRETPAHDSHVHH----TR*APRSPEAHISL----P*ESHA 141
++ V + AAVP T + ++PAH+SH H T AP +P S+ P +
Sbjct: 321 SAAVPIATSVAAVPTTGGSLPDSPAHESHSHESNSATASAPTTPSPAGSVTSAAPTATAT 380

Query: 140 ARQASQASLVASST 99
A A A+ A++T
Sbjct: 381 AAAAGSAAATAAAT 394


>sp|Q923L3|CSMD1_MOUSE CUB and sushi domain-containing protein 1
OS=Mus musculus GN=Csmd1 PE=2 SV=1
Length = 3564

Score = 30.0 bits (66), Expect = 3.8
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 23/92 (25%)
Frame = -2

Query: 300 IQFTCHTTSGRGR--------CAE--------------NLGDLQGNSC-T*FPCSSYKMS 190
++ C TTSGRGR C NL DL +C T + +
Sbjct: 2717 VRICCRTTSGRGRLTVCVPITCGHPGNPAHGLTNGTEFNLNDLVNFTCHTGYRLQGASRA 2776

Query: 189 PEKSGGSHLSPIRIPRCQTGESSEPGCVEYLV 94
+S G SP +P C+ S+PG VE V
Sbjct: 2777 QCRSNGQWSSP--LPICRVVNCSDPGSVENAV 2806


>sp|Q9DAF3|DDI1_MOUSE Protein DDI1 homolog 1 OS=Mus musculus GN=Ddi1
PE=1 SV=1
Length = 408

Score = 29.6 bits (65), Expect = 5.0
Identities = 23/80 (28%), Positives = 34/80 (42%)
Frame = -3

Query: 266 AAVPKTWETCRETPAHDSHVHHTR*APRSPEAHISLP*ESHAARQASQASLVASSTLFSF 87
+AVP T + R H H HH + P + +AH E+ Q + + S L S
Sbjct: 101 SAVPGT-SSSRHPHQHQHHYHHHQRIPSTQQAHGLASGENMTFAQELDSPALIRSMLLSN 159

Query: 86 M*DEPFATQIDPSLGEAQAS 27
D + +P+L EA S
Sbjct: 160 PHDLSLLKERNPALAEALLS 179


>sp|Q2FSF9|DP2L_METHJ DNA polymerase II large subunit
OS=Methanospirillum hungatei (strain JF-1 / DSM 864)
GN=polC PE=3 SV=1
Length = 1286

Score = 29.3 bits (64), Expect = 6.4
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Frame = -1

Query: 238 AGKLLHMIPMFIIQD-EPREVRRLTSLSHKNPTLPDRRV-------KRAWLRRVPCSH 89
+G LH +++ D +P E+R L HK+ TL D+ + + +L RV C H
Sbjct: 453 SGLYLHPDYLYLWDDLKPAEIRSLAEFIHKHGTLADKTLILPLDPTIKEYLERVLCEH 510


>sp|Q9USD4|ALG12_SCHPO Probable
dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl-alpha-1,
6-mannosyltransferase OS=Schizosaccharomyces pombe
GN=SPBC1734.12c PE=2 SV=2
Length = 546

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Frame = +1

Query: 208 TWESCAGVSLQVSQVFGTAASS-----ACSMTGELYYWSNLISN 324
+WES VS +S+ FGT + + +C+ +YY S +SN
Sbjct: 98 SWESMNSVSCSISKRFGTLSGALFILFSCAQFHLVYYMSRPLSN 141


>sp|Q8CGK6|IL28B_MOUSE Interleukin-28B OS=Mus musculus GN=Il28b PE=2
SV=1
Length = 193

Score = 28.9 bits (63), Expect = 8.4
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
Frame = -3

Query: 323 FDIKLLQ*YNSPVILQAEEAAVPKTWETCRET--------PAHD-SHVH 204
+D+K LQ P LQAE A K WE ++ P H SH+H
Sbjct: 78 WDLKQLQVQERPKALQAEVALTLKVWENINDSALTTILGQPLHTLSHIH 126


>sp|Q59986|IGA1_STRSA Immunoglobulin A1 protease OS=Streptococcus
sanguis GN=iga PE=1 SV=2
Length = 1854

Score = 28.9 bits (63), Expect = 8.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3

Query: 75 LISHE*EQGTRRNQARLTRLSGSVGFLWERDVS 173
LIS+ +G N R ++G G+LW+RD S
Sbjct: 867 LISNSYAEGNINNVKRFGSVAGVAGYLWDRDSS 899


tr_hit_id A9P2J3
Definition tr|A9P2J3|A9P2J3_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 59
Score (bit) 66.6
E-value 6.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921561|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_E03.
(331 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9P2J3|A9P2J3_PICSI Putative uncharacterized protein OS=Picea... 67 6e-10
tr|A7PGN5|A7PGN5_VITVI Chromosome chr17 scaffold_16, whole genom... 62 1e-08
tr|A5B734|A5B734_VITVI Putative uncharacterized protein OS=Vitis... 57 6e-07
tr|Q6EQW0|Q6EQW0_ORYSJ Putative uncharacterized protein OSJNBa00... 55 1e-06
tr|B8AGB8|B8AGB8_ORYSI Putative uncharacterized protein OS=Oryza... 55 1e-06
tr|B6TSI3|B6TSI3_MAIZE Putative uncharacterized protein OS=Zea m... 55 2e-06
tr|A7P287|A7P287_VITVI Chromosome chr19 scaffold_4, whole genome... 54 5e-06
tr|A5B394|A5B394_VITVI Putative uncharacterized protein OS=Vitis... 54 5e-06
tr|Q9M9A2|Q9M9A2_ARATH F27J15.21 (At1g49000) OS=Arabidopsis thal... 53 7e-06
tr|Q9LH80|Q9LH80_ARATH Gb|AAF43227.1 (Putative uncharacterized p... 53 9e-06
tr|A9P0T1|A9P0T1_PICSI Putative uncharacterized protein OS=Picea... 52 1e-05
tr|A9NQW0|A9NQW0_PICSI Putative uncharacterized protein OS=Picea... 52 1e-05
tr|Q9LII3|Q9LII3_ARATH Gb|AAF43227.1 (AT3g18560/K24M9_5) OS=Arab... 52 2e-05
tr|A5ALY3|A5ALY3_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05
tr|Q6ZIR5|Q6ZIR5_ORYSJ Os02g0711400 protein OS=Oryza sativa subs... 51 3e-05
tr|A9RJL9|A9RJL9_PHYPA Predicted protein OS=Physcomitrella paten... 51 3e-05
tr|A2X8V2|A2X8V2_ORYSI Putative uncharacterized protein OS=Oryza... 51 3e-05
tr|B6SSH2|B6SSH2_MAIZE Putative uncharacterized protein OS=Zea m... 50 4e-05
tr|B6TME4|B6TME4_MAIZE Putative uncharacterized protein OS=Zea m... 49 2e-04
tr|Q6ER70|Q6ER70_ORYSJ Os02g0321600 protein OS=Oryza sativa subs... 48 2e-04
tr|Q656A2|Q656A2_ORYSJ Putative uncharacterized protein P0596H06... 48 2e-04
tr|A2X449|A2X449_ORYSI Putative uncharacterized protein OS=Oryza... 48 2e-04
tr|B6TR43|B6TR43_MAIZE Putative uncharacterized protein OS=Zea m... 47 4e-04
tr|A3AAM8|A3AAM8_ORYSJ Putative uncharacterized protein OS=Oryza... 47 4e-04
tr|B6T735|B6T735_MAIZE Putative uncharacterized protein OS=Zea m... 47 5e-04
tr|Q9M9H2|Q9M9H2_ARATH F14O23.12 (Putative uncharacterized prote... 47 6e-04
tr|B8AX84|B8AX84_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.003
tr|Q6H8C4|Q6H8C4_ORYSJ Putative uncharacterized protein OJ1006_A... 44 0.004
tr|A9T1Z0|A9T1Z0_PHYPA Predicted protein OS=Physcomitrella paten... 44 0.004
tr|A2X2B2|A2X2B2_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.004

>tr|A9P2J3|A9P2J3_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 159

Score = 66.6 bits (161), Expect = 6e-10
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = +2

Query: 92 RTRYSTQPGSLDSPVWQRGILMGERCEPPDFSGLILYDEHGNHVQEFPCKSPKFSAQRP 268
R Q G DS VWQR ILMGERC+PP FSGLI+YD+ GN + +FP +SP + P
Sbjct: 97 RAAMEEQEGGGDS-VWQRSILMGERCQPPAFSGLIIYDDKGNRLPQFPPRSPILNIFHP 154


>tr|A7PGN5|A7PGN5_VITVI Chromosome chr17 scaffold_16, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00017622001
PE=4 SV=1
Length = 72

Score = 62.0 bits (149), Expect = 1e-08
Identities = 28/50 (56%), Positives = 35/50 (70%)
Frame = +2

Query: 125 DSPVWQRGILMGERCEPPDFSGLILYDEHGNHVQEFPCKSPKFSAQRPLP 274
D VWQR ILMG++C+P DFSG+I YD G +QE P +SP+ S PLP
Sbjct: 20 DGGVWQRAILMGDKCQPLDFSGVIYYDNKGEQLQELPLRSPRAS---PLP 66


>tr|A5B734|A5B734_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_020012 PE=4 SV=1
Length = 198

Score = 56.6 bits (135), Expect = 6e-07
Identities = 27/55 (49%), Positives = 39/55 (70%)
Frame = +2

Query: 110 QPGSLDSPVWQRGILMGERCEPPDFSGLILYDEHGNHVQEFPCKSPKFSAQRPLP 274
+ G+ + +WQ+ ILMGERC+ P+FSG+I YD +GN V E P ++P+ S PLP
Sbjct: 93 EEGTGEGGLWQKSILMGERCQHPEFSGVIFYDGYGNQVSE-PPRTPRAS---PLP 143


>tr|Q6EQW0|Q6EQW0_ORYSJ Putative uncharacterized protein
OSJNBa0086N11.28 OS=Oryza sativa subsp. japonica
GN=OSJNBa0086N11.28 PE=4 SV=1
Length = 202

Score = 55.5 bits (132), Expect = 1e-06
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = +2

Query: 92 RTRYSTQPGSLDSPVWQRGILMGERCEPPDFSGLILYDEHGNHVQ 226
RT P + PVWQR ILMG RCE P FSGLILYDEHG ++
Sbjct: 124 RTPMVAPPMTPMRPVWQRRILMGMRCELPRFSGLILYDEHGRPIR 168


>tr|B8AGB8|B8AGB8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_06972 PE=4 SV=1
Length = 195

Score = 55.5 bits (132), Expect = 1e-06
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = +2

Query: 92 RTRYSTQPGSLDSPVWQRGILMGERCEPPDFSGLILYDEHGNHVQ 226
RT P + PVWQR ILMG RCE P FSGLILYDEHG ++
Sbjct: 125 RTPMVAPPMTPMRPVWQRRILMGMRCELPRFSGLILYDEHGRPIR 169


>tr|B6TSI3|B6TSI3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 226

Score = 55.1 bits (131), Expect = 2e-06
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +2

Query: 128 SPVWQRGILMGERCEPPDFSGLILYDEHGNHVQ 226
+PVWQR ILMG RCE P FSG+ILYDEHG +Q
Sbjct: 158 TPVWQRRILMGTRCELPRFSGVILYDEHGRPLQ 190


>tr|A7P287|A7P287_VITVI Chromosome chr19 scaffold_4, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00027923001
PE=4 SV=1
Length = 170

Score = 53.5 bits (127), Expect = 5e-06
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +2

Query: 128 SPVWQRGILMGERCEPPDFSGLILYDEHGNHVQE 229
SPVWQR ILMGE+CE P FSGLILYDE G + +
Sbjct: 116 SPVWQRPILMGEKCELPRFSGLILYDETGQPLHQ 149


>tr|A5B394|A5B394_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_026296 PE=4 SV=1
Length = 171

Score = 53.5 bits (127), Expect = 5e-06
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +2

Query: 128 SPVWQRGILMGERCEPPDFSGLILYDEHGNHVQE 229
SPVWQR ILMGE+CE P FSGLILYDE G + +
Sbjct: 116 SPVWQRPILMGEKCELPRFSGLILYDETGQPLHQ 149


>tr|Q9M9A2|Q9M9A2_ARATH F27J15.21 (At1g49000) OS=Arabidopsis
thaliana GN=At1g49000 PE=2 SV=1
Length = 156

Score = 53.1 bits (126), Expect = 7e-06
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2

Query: 134 VWQRGILMGERCEPPDFSGLILYDEHGNHVQEFPCKSPKFSAQRPLP 274
+WQR ILMG +CEP DFSG+I YD +G + E P +SP+ + PLP
Sbjct: 107 LWQREILMGGKCEPLDFSGVIYYDSNGRLLNEVPPRSPRGT---PLP 150


>tr|Q9LH80|Q9LH80_ARATH Gb|AAF43227.1 (Putative uncharacterized
protein At3g14760) OS=Arabidopsis thaliana GN=At3g14760
PE=2 SV=1
Length = 168

Score = 52.8 bits (125), Expect = 9e-06
Identities = 34/72 (47%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Frame = +2

Query: 26 WKLELHQEMGQFEWQKA-HLT*MRTR-----YSTQPGSLDS--PVWQRGILMGERCEPPD 181
W MG F W A M TR + + SL++ PVWQR ILMGE+CE P
Sbjct: 72 WSKVKRTLMGSFCWSSAAKWMEMETRRQPPLLAVKERSLNAVDPVWQRPILMGEKCELPR 131

Query: 182 FSGLILYDEHGN 217
FSGLILYDE G+
Sbjct: 132 FSGLILYDECGH 143