BP921568
Clone id YMU001_000151_E10
Library
Length 434
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000151_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AATTCCATGGTTTACTATGTAGGCCAAAACTTCAAGAACATGAACGTCCAGTAGATGCAC
CTTCCACTTGCTCAACTGCATTGTCTAAACGCAGTTGGCCAAGCTTGAAATTCATTAAAC
AGACGCTATATCTGTTTTAATGTTGTCGGCAATCAAACTGGACAACGAAGTGAAACATTA
AAATTCATCTGAAGATTCTTCAGTAAGAAAAAGATCCATTTTCTGATGGTTGATTCTTCT
GGCAATGTGCCTTGTACTTACCATTAACAATAATCACAATTCATGATTGTCAGTATGTAC
ATGCTTCTCTGATTTTAAAAGCATAGGAAGCTGTTCTAAAAAGCTCTTCAACATAAAACC
TAGAACCAGCATAAATAAAAAGCAAAGAAAAACTTTGCCCATATACTCAAACGTGAACTC
TGCATTGCGCCCTC
■■Homology search results ■■ -
sp_hit_id Q93YS4
Definition sp|Q93YS4|WBC23_ARATH White-brown complex homolog protein 23 OS=Arabidopsis thaliana
Align length 59
Score (bit) 28.9
E-value 9.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921568|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_E10.
(434 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q93YS4|WBC23_ARATH White-brown complex homolog protein 23 OS=... 29 9.6

>sp|Q93YS4|WBC23_ARATH White-brown complex homolog protein 23
OS=Arabidopsis thaliana GN=WBC23 PE=2 SV=1
Length = 751

Score = 28.9 bits (63), Expect = 9.6
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = -3

Query: 375 FMLVLGFMLKSFLEQLPMLLKSEKHVHTDNHEL*LLLMVSTRHIARRINHQKMDLFLTE 199
FML GF F++++P+ + +++ + H LLL V + A IN ++D LTE
Sbjct: 671 FMLAGGF----FVKKVPVFISWIRYLSFNYHTYKLLLKVQYQDFAVSINGMRIDNGLTE 725


tr_hit_id A5BS97
Definition tr|A5BS97|A5BS97_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 33
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921568|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_E10.
(434 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5BS97|A5BS97_VITVI Putative uncharacterized protein OS=Vitis... 33 5.4
tr|Q23RM6|Q23RM6_TETTH Putative uncharacterized protein OS=Tetra... 33 5.4
tr|Q9FGI8|Q9FGI8_ARATH Genomic DNA, chromosome 5, P1 clone:MPA22... 33 9.3
tr|Q8RWG7|Q8RWG7_ARATH Putative uncharacterized protein At5g3748... 33 9.3
tr|Q8LA59|Q8LA59_ARATH Putative uncharacterized protein OS=Arabi... 33 9.3
tr|A7PZY3|A7PZY3_VITVI Chromosome chr8 scaffold_41, whole genome... 33 9.3

>tr|A5BS97|A5BS97_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_043921 PE=4 SV=1
Length = 433

Score = 33.5 bits (75), Expect = 5.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3

Query: 414 TFEYMGKVFLCFLFMLVLGFMLKSFLEQLPMLL 316
+F Y+GK+FL +F+ LG + LE LP L+
Sbjct: 394 SFVYIGKIFLAIIFIFALGAVFTLALENLPRLI 426


>tr|Q23RM6|Q23RM6_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_00384660 PE=4
SV=1
Length = 1527

Score = 33.5 bits (75), Expect = 5.4
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2

Query: 293 VCTCFSDFKSIGSCSKKLFNIKPRTSINKKQRKTLPIYSNV 415
+CT FSDF S K+ FNIK TS+ + + P N+
Sbjct: 378 ICTKFSDFMLNKSIMKEAFNIKETTSVVNQLNQKTPTQKNI 418


>tr|Q9FGI8|Q9FGI8_ARATH Genomic DNA, chromosome 5, P1 clone:MPA22
OS=Arabidopsis thaliana PE=4 SV=1
Length = 203

Score = 32.7 bits (73), Expect = 9.3
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -3

Query: 420 EFTFEYMGKVFLCFLFMLVLGFMLKSFLEQLPMLL 316
E + +Y+G++F F+ M +LG + LE LP L+
Sbjct: 161 EQSLKYIGRIFFAFVLMFILGGLFTVALENLPRLI 195


>tr|Q8RWG7|Q8RWG7_ARATH Putative uncharacterized protein At5g37480
OS=Arabidopsis thaliana GN=At5g37480 PE=2 SV=1
Length = 156

Score = 32.7 bits (73), Expect = 9.3
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -3

Query: 420 EFTFEYMGKVFLCFLFMLVLGFMLKSFLEQLPMLL 316
E + +Y+G++F F+ M +LG + LE LP L+
Sbjct: 114 EQSLKYIGRIFFAFVLMFILGGLFTVALENLPRLI 148


>tr|Q8LA59|Q8LA59_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana PE=2 SV=1
Length = 156

Score = 32.7 bits (73), Expect = 9.3
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -3

Query: 420 EFTFEYMGKVFLCFLFMLVLGFMLKSFLEQLPMLL 316
E + +Y+G++F F+ M +LG + LE LP L+
Sbjct: 114 EQSLKYIGRIFFAFVLMFILGGLFTVALENLPRLI 148


>tr|A7PZY3|A7PZY3_VITVI Chromosome chr8 scaffold_41, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00027059001
PE=4 SV=1
Length = 171

Score = 32.7 bits (73), Expect = 9.3
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3

Query: 414 TFEYMGKVFLCFLFMLVLGFMLKSFLEQLPMLL 316
+F Y+GK+F+ +F+ LG + LE LP L+
Sbjct: 132 SFVYIGKIFIAIIFIFALGAVFTLALENLPRLI 164