BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921575|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_F07.
         (418 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P08081|CLCA_RAT Clathrin light chain A OS=Rattus norvegicus G...    30   2.9  
sp|P09496|CLCA_HUMAN Clathrin light chain A OS=Homo sapiens GN=C...    30   3.8  
sp|P04973|CLCA_BOVIN Clathrin light chain A OS=Bos taurus GN=CLT...    30   3.8  
sp|P55019|S12A3_PSEAM Solute carrier family 12 member 3 OS=Pseud...    30   4.9  
sp|Q9YEM5|KSGA_AERPE Probable dimethyladenosine transferase OS=A...    30   4.9  
sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosa...    30   4.9  
sp|Q5YCC5|TMC7_CHICK Transmembrane channel-like protein 7 OS=Gal...    29   6.4  
sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccha...    29   6.4  

>sp|P08081|CLCA_RAT Clathrin light chain A OS=Rattus norvegicus
           GN=Clta PE=1 SV=1
          Length = 248

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +1

Query: 91  KTNALSIKSGEALYKQPWPD-IKHIIRIDLPLCYSLE 198
           KT A +  + EA YKQP+ D I ++  I+ P CYSLE
Sbjct: 156 KTKASNRVADEAFYKQPFADVIGYVTNINHP-CYSLE 191


>sp|P09496|CLCA_HUMAN Clathrin light chain A OS=Homo sapiens GN=CLTA
           PE=1 SV=1
          Length = 248

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +1

Query: 91  KTNALSIKSGEALYKQPWPD-IKHIIRIDLPLCYSLE 198
           KT A +  + EA YKQP+ D I ++  I+ P CYSLE
Sbjct: 156 KTKANNRVADEAFYKQPFADVIGYVTNINHP-CYSLE 191


>sp|P04973|CLCA_BOVIN Clathrin light chain A OS=Bos taurus GN=CLTA
           PE=1 SV=1
          Length = 243

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +1

Query: 91  KTNALSIKSGEALYKQPWPD-IKHIIRIDLPLCYSLE 198
           KT A +  + EA YKQP+ D I ++  I+ P CYSLE
Sbjct: 151 KTKANNRVADEAFYKQPFADVIGYVTNINHP-CYSLE 186


>sp|P55019|S12A3_PSEAM Solute carrier family 12 member 3
           OS=Pseudopleuronectes americanus GN=slc12a3 PE=2 SV=1
          Length = 1023

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -2

Query: 336 LCSNGGV--SPVYGQVTNGGSWNPNVKFFSIWRGLIIQAC 223
           LCS   +  S  +  VTN   W P+ +F+S W  L+   C
Sbjct: 536 LCSYALINFSCFHASVTNSPGWRPSFRFYSKWLSLLGAVC 575


>sp|Q9YEM5|KSGA_AERPE Probable dimethyladenosine transferase
           OS=Aeropyrum pernix GN=ksgA PE=3 SV=1
          Length = 277

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = +2

Query: 53  HTKALVIQGCSHLRPML*ASRVVRPCINNHGLISST*LELIYHSAIPWKDHETSGDLQAW 232
           + +AL + GC+  +    AS+V+R C+   G            +  PW D  + GD + W
Sbjct: 215 YARALELAGCAFTQRNKKASKVLRRCLEAAGC-----------APPPWLD--SLGDARVW 261

Query: 233 MISP 244
           M+ P
Sbjct: 262 MLRP 265


>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48
           OS=Schizosaccharomyces pombe GN=cdc48 PE=1 SV=2
          Length = 815

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +1

Query: 67  GYSRLLAFKTNALSIKSGEALYKQPWPDIKHIIRID-LPLCYSLEG 201
           G +R+     N L ++ G+ +   P PDIK+  RI  LPL  ++EG
Sbjct: 100 GVARINRVVRNNLRVRLGDIVTINPCPDIKYAERISVLPLADTVEG 145


>sp|Q5YCC5|TMC7_CHICK Transmembrane channel-like protein 7 OS=Gallus
           gallus GN=Tmc7 PE=2 SV=1
          Length = 735

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 382 FLDFLLHLNVSVANWSLFKWWGI 314
           F+DF   L V+  +W L +WWG+
Sbjct: 506 FVDFPRKLLVTYCSWKLVQWWGL 528


>sp|P25694|CDC48_YEAST Cell division control protein 48
           OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3
          Length = 835

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 67  GYSRLLAFKTNALSIKSGEALYKQPWPDIKHIIRID-LPLCYSLEG 201
           G  R+     N L I+ G+ +   P PDIK+  RI  LP+  ++EG
Sbjct: 90  GACRINRVVRNNLRIRLGDLVTIHPCPDIKYATRISVLPIADTIEG 135

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921575|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_F07.
         (418 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q12QU2|Q12QU2_SHEDO Methyltransferase type 11 OS=Shewanella d...    33   9.2  

>tr|Q12QU2|Q12QU2_SHEDO Methyltransferase type 11 OS=Shewanella
           denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
           GN=Sden_0896 PE=4 SV=1
          Length = 269

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 415 WTSLFNGFLENFLDFLLHLNVSVANWSLFKWWGISCLWSGD 293
           W+S    +L N LDFL++LN S+          ISC  SG+
Sbjct: 95  WSSFSLSYLRNPLDFLIYLNASMKQGGWIALLDISCFISGN 135