BP921576
Clone id YMU001_000151_F09
Library
Length 502
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000151_F09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GACGAGTGTCGAGGCTCCTGCGAAAGGCATTTAACTGCACGTATTGCGCGCACTCATTGT
CGTGCTCATCATCAGAACTTGGACTTCCACCATAGCTGTAAGCTTCTCTTTCTTTTCTCT
CTAGCGCCATCACATCAGCAGAAACAGACTAGCGCCGATGATGAGGAAGCTCGTCAGTCT
TCGCCTTCTTCTGGGTCTCCTCTTTCTGTGTTGCTGCCTCTTTGACATAGGCGATTGCAT
GAAGCGGGAAGCCCGGCGCATGCTTGAGCCTTCCGATTGCCCCTGTGGAGAAATCTACAC
CGTTGCAGAGGGCGACACCCTGCAGAGCATCAGCGGCGACTGCAATGCTCCCTTCGTCCT
GATTGACAACCCACAAATCGAAGATGCCGATGATGTGTGGCCGGGCCTCATTCTCAAGCT
CAAATGTGCCCACTTCTAGTATTTGTCCCTCTTTGTGCACTCGCTTGGGATGGTAATTAT
ACACTCACATATCCATGTACGG
■■Homology search results ■■ -
sp_hit_id O94985
Definition sp|O94985|CSTN1_HUMAN Calsyntenin-1 OS=Homo sapiens
Align length 37
Score (bit) 31.6
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921576|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_F09.
(502 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O94985|CSTN1_HUMAN Calsyntenin-1 OS=Homo sapiens GN=CLSTN1 PE... 32 2.2
sp|P0ADE6|YGAU_ECOLI Uncharacterized protein ygaU OS=Escherichia... 31 3.7
sp|P0ADE7|YGAU_ECOL6 Uncharacterized protein ygaU OS=Escherichia... 31 3.7
sp|Q867T7|NCFA_DICDI NADPH oxidase activator OS=Dictyostelium di... 30 4.8
sp|Q700K0|SSPO_RAT SCO-spondin OS=Rattus norvegicus GN=Sspo PE=2... 30 4.9
sp|Q5B4Q8|VID21_EMENI Chromatin modification-related protein vid... 30 6.3
sp|P70424|ERBB2_MOUSE Receptor tyrosine-protein kinase erbB-2 OS... 30 6.3

>sp|O94985|CSTN1_HUMAN Calsyntenin-1 OS=Homo sapiens GN=CLSTN1 PE=1
SV=1
Length = 981

Score = 31.6 bits (70), Expect = 2.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1

Query: 49 RTHCRAHHQNLDFHHSCKLLFLFSLAPSHQQKQTSAD 159
+T HH +L + H C+L+FLF PS ++K A+
Sbjct: 410 KTDMNRHHYSL-YVHGCRLIFLFRQDPSEEKKYRPAE 445


>sp|P0ADE6|YGAU_ECOLI Uncharacterized protein ygaU OS=Escherichia
coli (strain K12) GN=ygaU PE=1 SV=2
Length = 149

Score = 30.8 bits (68), Expect = 3.7
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Frame = +2

Query: 290 EIYTVAEGDTLQSIS----GDCNAPFVLID--NPQIEDADDVWPGLILKL 421
+ YTV GDTL +IS G+ N + + P ++ D ++PG +L++
Sbjct: 97 QFYTVKSGDTLSAISKQVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRI 146


>sp|P0ADE7|YGAU_ECOL6 Uncharacterized protein ygaU OS=Escherichia
coli O6 GN=ygaU PE=3 SV=2
Length = 149

Score = 30.8 bits (68), Expect = 3.7
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Frame = +2

Query: 290 EIYTVAEGDTLQSIS----GDCNAPFVLID--NPQIEDADDVWPGLILKL 421
+ YTV GDTL +IS G+ N + + P ++ D ++PG +L++
Sbjct: 97 QFYTVKSGDTLSAISKQVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRI 146


>sp|Q867T7|NCFA_DICDI NADPH oxidase activator OS=Dictyostelium
discoideum GN=ncfA PE=2 SV=1
Length = 604

Score = 30.4 bits (67), Expect = 4.8
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +3

Query: 243 SGKPGACLSLPIAPVEKSTPLQRATPCRASAATAMLPSS*LTTHKSKMPMMCGRASFSSS 422
S P L P +P S+P ++P +S+++ LP + + S P +S SSS
Sbjct: 211 SSPPSYILKGPSSPPSSSSP-SSSSPSLSSSSSPKLPPTPKPSFGSSPPPSSSSSSSSSS 269

Query: 423 NVPTSSICP 449
+ +SSI P
Sbjct: 270 SSSSSSISP 278


>sp|Q700K0|SSPO_RAT SCO-spondin OS=Rattus norvegicus GN=Sspo PE=2 SV=1
Length = 5141

Score = 30.4 bits (67), Expect = 4.9
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2

Query: 224 DIGDCMKREARRMLEPSDCPCGEIYT-VAEGDTLQSISGDCNAPFVLIDN 370
D G+C +E++ PS PC E+ AEG+ L SG C L DN
Sbjct: 1354 DCGNCTCQESQWHCNPSGAPCEEMEPGCAEGEALCRESGHCVPLEWLCDN 1403


>sp|Q5B4Q8|VID21_EMENI Chromatin modification-related protein vid21
OS=Emericella nidulans GN=vid21 PE=3 SV=1
Length = 1447

Score = 30.0 bits (66), Expect = 6.3
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = +3

Query: 246 GKPGACLSLPIAPVEKSTPLQRATPCRASAATAMLPSS*LTTHKSKMPMMCGRASFSSSN 425
G+P P++PV + P TP +A+ A + ++ K P SS
Sbjct: 211 GRPVHVTDQPLSPVSSAGPYSNNTPAPTAASPATSTTEDVSAEKLPTPKRIAATQERSSF 270

Query: 426 VPTS 437
VPT+
Sbjct: 271 VPTT 274


>sp|P70424|ERBB2_MOUSE Receptor tyrosine-protein kinase erbB-2
OS=Mus musculus GN=Erbb2 PE=1 SV=3
Length = 1256

Score = 30.0 bits (66), Expect = 6.3
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -3

Query: 290 LHRGNRKAQACAGLPASCNRLCQRG 216
LH GNR +AC CN LC RG
Sbjct: 495 LHSGNRPEEACGLEGLVCNSLCARG 519


tr_hit_id B8LMD4
Definition tr|B8LMD4|B8LMD4_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 61
Score (bit) 70.9
E-value 3.0e-11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921576|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_F09.
(502 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LMD4|B8LMD4_PICSI Putative uncharacterized protein OS=Picea... 71 3e-11
tr|A9NJY2|A9NJY2_PICSI Putative uncharacterized protein OS=Picea... 66 8e-10
tr|Q6NLQ4|Q6NLQ4_ARATH At4g25433 (Putative uncharacterized prote... 65 2e-09
tr|Q8H095|Q8H095_ORYSJ Os10g0524300 protein OS=Oryza sativa subs... 63 7e-09
tr|A3C6M3|A3C6M3_ORYSJ Putative uncharacterized protein OS=Oryza... 63 7e-09
tr|A2Z9I0|A2Z9I0_ORYSI Putative uncharacterized protein OS=Oryza... 63 7e-09
tr|Q8H053|Q8H053_ORYSJ Putative dihydrodipicolinate reductase-li... 63 9e-09
tr|B8ALW0|B8ALW0_ORYSI Putative uncharacterized protein OS=Oryza... 63 9e-09
tr|B6TQ19|B6TQ19_MAIZE LysM domain containing protein OS=Zea may... 62 1e-08
tr|A7R1T1|A7R1T1_VITVI Chromosome undetermined scaffold_376, who... 62 1e-08
tr|A7PPH4|A7PPH4_VITVI Chromosome chr8 scaffold_23, whole genome... 62 1e-08
tr|A5AZB4|A5AZB4_VITVI Putative uncharacterized protein OS=Vitis... 62 1e-08
tr|Q9FIS3|Q9FIS3_ARATH Arabidopsis thaliana genomic DNA, chromos... 62 2e-08
tr|Q7XTZ2|Q7XTZ2_ORYSJ OSJNBa0019K04.5 protein (Putative unchara... 61 3e-08
tr|Q01JW9|Q01JW9_ORYSA OSIGBa0147H17.4 protein OS=Oryza sativa G... 61 3e-08
tr|A9S7Z3|A9S7Z3_PHYPA Predicted protein (Fragment) OS=Physcomit... 58 2e-07
tr|Q9LXI6|Q9LXI6_ARATH Putative uncharacterized protein F3C22_19... 57 5e-07
tr|Q2RJ04|Q2RJ04_MOOTA Peptidoglycan-binding LysM OS=Moorella th... 42 0.016
tr|B3PGY8|B3PGY8_CELJU LysM domain protein OS=Cellvibrio japonic... 36 1.2
tr|Q6FDT6|Q6FDT6_ACIAD Putative uncharacterized protein OS=Acine... 35 1.5
tr|A1KC30|A1KC30_AZOSB Putative uncharacterized protein OS=Azoar... 35 1.5
tr|B3NVA8|B3NVA8_DROER GG18881 OS=Drosophila erecta GN=GG18881 P... 35 2.0
tr|B4Q2P0|B4Q2P0_DROYA GE16132 OS=Drosophila yakuba GN=GE16132 P... 35 2.6
tr|A3TVW4|A3TVW4_9RHOB Gamma-D-glutamyl-L-diamino acid endopepti... 34 3.4
tr|A3ASS3|A3ASS3_ORYSJ Putative uncharacterized protein OS=Oryza... 34 3.4
tr|B2A4M6|B2A4M6_NATTJ Peptidoglycan-binding LysM OS=Natranaerob... 34 4.5
tr|A7QMV8|A7QMV8_VITVI Chromosome chr14 scaffold_128, whole geno... 34 4.5
tr|A5ARC1|A5ARC1_VITVI Putative uncharacterized protein OS=Vitis... 34 4.5
tr|Q0CFT9|Q0CFT9_ASPTN Putative uncharacterized protein OS=Asper... 34 4.5
tr|A6GZB6|A6GZB6_FLAPJ Putative uncharacterized protein OS=Flavo... 33 5.8

>tr|B8LMD4|B8LMD4_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 97

Score = 70.9 bits (172), Expect = 3e-11
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +2

Query: 239 MKREARRMLEPSDCPCGEIYTVAEGDTLQSISGDCNAPFVLIDNPQIEDADDVWPGLILK 418
+ +A ++ + PC EIY V EG+TLQ+IS CNAPF+L DNP I+D DD++ GL LK
Sbjct: 31 LNADAMTIVNRHNRPCEEIYIVGEGETLQTISEKCNAPFILFDNPHIQDTDDIYEGLPLK 90

Query: 419 L 421
+
Sbjct: 91 I 91


>tr|A9NJY2|A9NJY2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 89

Score = 66.2 bits (160), Expect = 8e-10
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +2

Query: 284 CGEIYTVAEGDTLQSISGDCNAPFVLIDNPQIEDADDVWPGLILKL 421
C EIY V EG+TLQ+IS CNAPF+L DNP I+D DD++ G+ LK+
Sbjct: 40 CEEIYIVGEGETLQTISEKCNAPFILFDNPHIQDTDDIYEGVPLKI 85


>tr|Q6NLQ4|Q6NLQ4_ARATH At4g25433 (Putative uncharacterized protein)
OS=Arabidopsis thaliana GN=At4g25433 PE=4 SV=1
Length = 110

Score = 65.1 bits (157), Expect = 2e-09
Identities = 31/63 (49%), Positives = 41/63 (65%)
Frame = +2

Query: 233 DCMKREARRMLEPSDCPCGEIYTVAEGDTLQSISGDCNAPFVLIDNPQIEDADDVWPGLI 412
+C ++M+E PC E+Y V EGDTL SIS C PF++ NP I D DDV+PGL+
Sbjct: 45 NCEVWRGKQMMER---PCEELYVVGEGDTLHSISEKCGDPFIVERNPHIHDPDDVFPGLL 101

Query: 413 LKL 421
+KL
Sbjct: 102 IKL 104


>tr|Q8H095|Q8H095_ORYSJ Os10g0524300 protein OS=Oryza sativa subsp.
japonica GN=Os10g0524300 PE=4 SV=2
Length = 108

Score = 63.2 bits (152), Expect = 7e-09
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +2

Query: 281 PCGEIYTVAEGDTLQSISGDCNAPFVLIDNPQIEDADDVWPGLILKL 421
PC EIY V EG+TL SIS C P++L NP + D DDV+PGL++K+
Sbjct: 54 PCEEIYVVEEGETLHSISDRCGDPYILEQNPHVHDPDDVFPGLVIKI 100


>tr|A3C6M3|A3C6M3_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_030945 PE=4 SV=1
Length = 106

Score = 63.2 bits (152), Expect = 7e-09
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +2

Query: 281 PCGEIYTVAEGDTLQSISGDCNAPFVLIDNPQIEDADDVWPGLILKL 421
PC EIY V EG+TL SIS C P++L NP + D DDV+PGL++K+
Sbjct: 52 PCEEIYVVEEGETLHSISDRCGDPYILEQNPHVHDPDDVFPGLVIKI 98


>tr|A2Z9I0|A2Z9I0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_34380 PE=4 SV=1
Length = 106

Score = 63.2 bits (152), Expect = 7e-09
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +2

Query: 281 PCGEIYTVAEGDTLQSISGDCNAPFVLIDNPQIEDADDVWPGLILKL 421
PC EIY V EG+TL SIS C P++L NP + D DDV+PGL++K+
Sbjct: 52 PCEEIYVVEEGETLHSISDRCGDPYILEQNPHVHDPDDVFPGLVIKI 98


>tr|Q8H053|Q8H053_ORYSJ Putative dihydrodipicolinate reductase-like
protein (Putative uncharacterized protein) OS=Oryza
sativa subsp. japonica GN=OJ1263H11.2 PE=4 SV=1
Length = 463

Score = 62.8 bits (151), Expect = 9e-09
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +2

Query: 284 CGEIYTVAEGDTLQSISGDCNAPFVLIDNPQIEDADDVWPGLILKL 421
C EIY VAEG+TL SIS C P++L NP + D DDV+PGL++K+
Sbjct: 71 CEEIYVVAEGETLHSISDKCGDPYILEQNPHVHDPDDVFPGLVIKI 116


>tr|B8ALW0|B8ALW0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_09751 PE=4 SV=1
Length = 122

Score = 62.8 bits (151), Expect = 9e-09
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +2

Query: 284 CGEIYTVAEGDTLQSISGDCNAPFVLIDNPQIEDADDVWPGLILKL 421
C EIY VAEG+TL SIS C P++L NP + D DDV+PGL++K+
Sbjct: 71 CEEIYVVAEGETLHSISDKCGDPYILEQNPHVHDPDDVFPGLVIKI 116


>tr|B6TQ19|B6TQ19_MAIZE LysM domain containing protein OS=Zea mays
PE=4 SV=1
Length = 113

Score = 62.4 bits (150), Expect = 1e-08
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +2

Query: 281 PCGEIYTVAEGDTLQSISGDCNAPFVLIDNPQIEDADDVWPGLILKL 421
PC EIY VAEG+TL SIS C P +L NP + D DDV+PGL++++
Sbjct: 61 PCEEIYVVAEGETLHSISDKCGDPLILERNPHVHDXDDVFPGLVIRI 107


>tr|A7R1T1|A7R1T1_VITVI Chromosome undetermined scaffold_376, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00012396001 PE=4 SV=1
Length = 120

Score = 62.4 bits (150), Expect = 1e-08
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +2

Query: 281 PCGEIYTVAEGDTLQSISGDCNAPFVLIDNPQIEDADDVWPGLILKL 421
PC EIY V EG+TL +IS C P+++ NP I D DDV+PGL++K+
Sbjct: 57 PCDEIYVVGEGETLHTISDKCGDPYIVEQNPHIHDPDDVFPGLVIKI 103