BP921578
Clone id YMU001_000151_F11
Library
Length 540
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000151_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTGATTGTCGGTCCTGGTTTCTTCTTGCTTGCGATCGACGCACTCGAAAACGTTTCTTG
CGATGGCGTTCTTTTCCCACTCCTGGGGATTGGTTTCTATTCTACTTGCAAGTGATGTAC
TTGAGAGGGTTGCGGTGACATCATTTCATTCCGTGCTTTTTGTGAGGTGGTCCTGCCTAC
CGTGGGCTAGTGTTGCTTCATTTGCTTCTGTTGCGTTAGGAGCACCACTGATTGAGCTGA
CTATTTTCTCCCTTGGCAGCTAGGTTTGGCATGTGTTGACATTCTTTTTGAGCTTAAATG
CGCGTTCGTCATTGCCTCGTCGTCGATGGTCTCTTGCAATGCTTACCTATAGTGATAATT
GAATTACTTGCTCTATGCTAGTGTTGTTTTTTTATTCCTGGTCCTGCTTTGTTTTGGCTT
GTGTGCGACGCACATGAGAACGGTCTTGCGCTGGTATAGTCGTCTTGGCTCCTACTGCTG
GTTTTTCCCCTGCTCTGCACGTGATGCAATCGAGATGTCGGCAGTGACATCGTTTGCTGT
■■Homology search results ■■ -
sp_hit_id Q86I06
Definition sp|Q86I06|NEK3_DICDI Probable serine/threonine-protein kinase nek3 OS=Dictyostelium discoideum
Align length 60
Score (bit) 32.7
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921578|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_F11.
(540 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q86I06|NEK3_DICDI Probable serine/threonine-protein kinase ne... 33 1.2
sp|A0JM08|K0284_XENTR Protein KIAA0284 homolog OS=Xenopus tropic... 31 3.4
sp|P45481|CBP_MOUSE CREB-binding protein OS=Mus musculus GN=Creb... 31 4.5
sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREB... 31 4.5
sp|Q7SBU6|VID21_NEUCR Chromatin modification-related protein vid... 30 7.6
sp|Q69154|IE63_MCMVS Transcriptional regulator IE63 homolog OS=M... 30 7.6
sp|Q9V1H7|AROE_PYRAB Shikimate dehydrogenase OS=Pyrococcus abyss... 30 7.6
sp|Q8CI03|FWCH1_MOUSE FLYWCH-type zinc finger-containing protein... 30 9.8

>sp|Q86I06|NEK3_DICDI Probable serine/threonine-protein kinase nek3
OS=Dictyostelium discoideum GN=nek3 PE=3 SV=1
Length = 1123

Score = 32.7 bits (73), Expect = 1.2
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = -1

Query: 186 PTVGRTTSQKARNEMMSPQPSQVHHLQVE*KPIPRSGKRTPSQETFSSASIASKKKPGPT 7
PT + T+ K+ + M++P+ + P P + TP + + SS+S +S K P PT
Sbjct: 480 PTTPKITTPKSTSTMITPKRTTTTTTT----PTPTTATTTPKKSSLSSSSSSSVKPPPPT 535


>sp|A0JM08|K0284_XENTR Protein KIAA0284 homolog OS=Xenopus tropicalis
PE=2 SV=1
Length = 1628

Score = 31.2 bits (69), Expect = 3.4
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Frame = -1

Query: 333 ETIDDEAMTNAHLSSKRMSTHAKPSCQGRK*SAQSVVLLTQQKQMKQH*PTVGRTTS--- 163
E+ D E + +S S+ AK S + +K S ++ + +++ + P+ TTS
Sbjct: 1169 ESADVERSNISPGTSSANSSSAKSSTETKKPSRLDILAMPRKRAGSFNVPSDSETTSSVR 1228

Query: 162 -----QKARNEMMSPQPSQVHHLQVE*KPIPRSGKRTP----SQETFSSASIASKKKPG 13
+ S +P+ Q KP+P + K+TP S +SS+S + +++ G
Sbjct: 1229 GMFSGRSIDQSYTSRKPAVAESKQPPKKPLPPTQKQTPRPRSSSVKYSSSSTSRRRQQG 1287


>sp|P45481|CBP_MOUSE CREB-binding protein OS=Mus musculus GN=Crebbp
PE=1 SV=2
Length = 2441

Score = 30.8 bits (68), Expect = 4.5
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 11/81 (13%)
Frame = -1

Query: 219 LTQQKQMKQH*PTVGRTTSQKARNEMMSPQPSQVHHL-----------QVE*KPIPRSGK 73
+ QQ+QMKQ + G+ + M+S QP Q HL QV P P
Sbjct: 2294 ILQQQQMKQQIGSPGQPNPMSPQQHMLSGQP-QASHLPGQQIATSLSNQVR-SPAPVQSP 2351

Query: 72 RTPSQETFSSASIASKKKPGP 10
R SQ SS S + +P P
Sbjct: 2352 RPQSQPPHSSPSPRIQPQPSP 2372


>sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREBBP
PE=1 SV=3
Length = 2442

Score = 30.8 bits (68), Expect = 4.5
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 11/81 (13%)
Frame = -1

Query: 219 LTQQKQMKQH*PTVGRTTSQKARNEMMSPQPSQVHHL-----------QVE*KPIPRSGK 73
+ QQ+QMKQ + G+ + M+S QP Q HL QV P P
Sbjct: 2295 ILQQQQMKQQIGSPGQPNPMSPQQHMLSGQP-QASHLPGQQIATSLSNQVR-SPAPVQSP 2352

Query: 72 RTPSQETFSSASIASKKKPGP 10
R SQ SS S + +P P
Sbjct: 2353 RPQSQPPHSSPSPRIQPQPSP 2373


>sp|Q7SBU6|VID21_NEUCR Chromatin modification-related protein vid-21
OS=Neurospora crassa GN=vid-21 PE=3 SV=1
Length = 2189

Score = 30.0 bits (66), Expect = 7.6
Identities = 23/93 (24%), Positives = 38/93 (40%)
Frame = -1

Query: 336 QETIDDEAMTNAHLSSKRMSTHAKPSCQGRK*SAQSVVLLTQQKQMKQH*PTVGRTTSQK 157
Q + + H + +P QG+ Q VV Q+Q +QH P + Q+
Sbjct: 1317 QRAVAVQLQQQQHQQHQHQQHPQQPQQQGQV--QQQVV---SQQQQQQHQPQQQQQPQQQ 1371

Query: 156 ARNEMMSPQPSQVHHLQVE*KPIPRSGKRTPSQ 58
+ + PQ Q H QV+ P+ ++ P Q
Sbjct: 1372 QQLQQQQPQQQQPQHQQVQ---TPQPAQQQPQQ 1401


>sp|Q69154|IE63_MCMVS Transcriptional regulator IE63 homolog
OS=Murine cytomegalovirus (strain Smith) GN=UL69 PE=3
SV=1
Length = 841

Score = 30.0 bits (66), Expect = 7.6
Identities = 25/89 (28%), Positives = 39/89 (43%)
Frame = -1

Query: 309 TNAHLSSKRMSTHAKPSCQGRK*SAQSVVLLTQQKQMKQH*PTVGRTTSQKARNEMMSPQ 130
+N H SSK ST + + G+ A+ +++ Q Q P T+ + ++ M P
Sbjct: 561 SNGHHSSKSPSTVSSTTVHGQN-GARGDSAPSRKSQQSQQQPET--TSKESSKTAAMPPP 617

Query: 129 PSQVHHLQVE*KPIPRSGKRTPSQETFSS 43
PS P P S +R PS+ SS
Sbjct: 618 PSPC-------SPSPASRERRPSKSPSSS 639


>sp|Q9V1H7|AROE_PYRAB Shikimate dehydrogenase OS=Pyrococcus abyssi
GN=aroE PE=3 SV=1
Length = 264

Score = 30.0 bits (66), Expect = 7.6
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -1

Query: 522 ADISI-ASRAEQGKNQQ*EPRRLYQRKTVLMCVAHKPKQSR 403
AD+ I A+ G N+ PRRL +R+ ++M + +KP ++R
Sbjct: 173 ADVLINATSVGMGTNESLVPRRLLRRELIVMDIVYKPLKTR 213


>sp|Q8CI03|FWCH1_MOUSE FLYWCH-type zinc finger-containing protein 1
OS=Mus musculus GN=Flywch1 PE=2 SV=1
Length = 673

Score = 29.6 bits (65), Expect = 9.8
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 6/42 (14%)
Frame = -3

Query: 511 DCITCRAGEKPAVGAK------TTIPAQDRSHVRRTQAKTKQ 404
DC + RAG++P+VGA+ +PA+D+ + T +++
Sbjct: 10 DCESLRAGQEPSVGARKPQESSNLVPARDKERPKPTDVASQE 51


tr_hit_id A7S0R3
Definition tr|A7S0R3|A7S0R3_NEMVE Predicted protein OS=Nematostella vectensis
Align length 61
Score (bit) 33.9
E-value 5.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921578|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_F11.
(540 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7S0R3|A7S0R3_NEMVE Predicted protein OS=Nematostella vectens... 34 5.6
tr|Q335R6|Q335R6_TOMSC NADH-ubiquinone oxidoreductase chain 2 OS... 33 9.5
tr|Q8BWE0|Q8BWE0_MOUSE Putative uncharacterized protein (Fragmen... 33 9.7

>tr|A7S0R3|A7S0R3_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g242041 PE=4 SV=1
Length = 518

Score = 33.9 bits (76), Expect = 5.6
Identities = 19/61 (31%), Positives = 41/61 (67%)
Frame = -3

Query: 451 AQDRSHVRRTQAKTKQDQE*KNNTSIEQVIQLSL*VSIARDHRRRGNDERAFKLKKNVNT 272
A+D +++R+ Q + K D E + +T ++++ ++ L VS ++ R+R +DE KL+K +++
Sbjct: 431 ARDEANLRKVQIQAK-DIEAQISTKLKEIERMKLEVSSLKNKRKRCDDE-CDKLRKRLHS 488

Query: 271 C 269
C
Sbjct: 489 C 489


>tr|Q335R6|Q335R6_TOMSC NADH-ubiquinone oxidoreductase chain 2
OS=Tomistoma schlegelii GN=NADH2 PE=3 SV=1
Length = 347

Score = 33.1 bits (74), Expect = 9.5
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +3

Query: 177 LPWASVASFASVALGAPLIELTIFSLGS*VWHVLTFFLSLN--------ARSSLPRRRWS 332
L W + + L +PLI + S+ + + V+ +L LN A SS+ + W+
Sbjct: 130 LTWQKLGPLIMLFLMSPLINFEVLSMMAVLSAVVAGWLGLNQTQVRKLVAMSSIAQMAWT 189

Query: 333 LAMLTYSDN*ITCSMLVLFFYSWSCFVLA 419
L ++ Y+ S+++L FY +S + A
Sbjct: 190 LVIVKYAP-----SLMILAFYLYSLTISA 213


>tr|Q8BWE0|Q8BWE0_MOUSE Putative uncharacterized protein (Fragment)
OS=Mus musculus GN=Card6 PE=2 SV=1
Length = 1157

Score = 33.1 bits (74), Expect = 9.7
Identities = 28/94 (29%), Positives = 37/94 (39%)
Frame = -1

Query: 291 SKRMSTHAKPSCQGRK*SAQSVVLLTQQKQMKQH*PTVGRTTSQKARNEMMSPQPSQVHH 112
S S+HAKPS S+Q+ Q Q K P + S + P Q H
Sbjct: 1040 SHPQSSHAKPS---HPQSSQAKPSHPQSSQAKPTHPQSSQANSHHPQASQAKPSHPQSSH 1096

Query: 111 LQVE*KPIPRSGKRTPSQETFSSASIASKKKPGP 10
+ P P K +PSQ T A A + +P P
Sbjct: 1097 AKPS-HPHPSHAKPSPSQSTQCKAHKAHQSQPKP 1129