BP921579
Clone id YMU001_000151_F12
Library
Length 490
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000151_F12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGACACCTGTCCGAGAGTTGTAGTAGCACAGCATTCCCATATCAGGTGCAACATCCACTT
TGGTAAACTGATTGTATGTGGGCAGTGGTATCATATGCCCTTGACCCGTATGCTTCTCTG
CCCAATTCTTAGTTCTCCAAAATTGTAGCTGCTTCTGCAACTTTTTCATTCTCTCCAATA
AATCCTTCACATCGACAGCTTGATAATCACGTGCTTGGAGAGCCTCAACATCACAATCCT
CCAGTGATAGAATTGCAACATCATCAGTCTGCACGATTTCATCTCTGCTCACTTCAGCGG
CCAGCCTCCGAGACTTTCTTTTTGCTTTAGGCAGAACTTGTACAGATGCCGAATCAGACG
GTTTCACGTCTAACACATTTATAGAGACCTTAGGTATGATTAGTTTGTACTCGACACTGA
CAAAATCACTTTCACTTTTAGAGGATCTTGAAGGCTCTGAGAAAATGGGCCTTCCCTCCA
CTGATTGTCC
■■Homology search results ■■ -
sp_hit_id P70600
Definition sp|P70600|FAK2_RAT Protein tyrosine kinase 2 beta OS=Rattus norvegicus
Align length 89
Score (bit) 33.1
E-value 0.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921579|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_F12.
(490 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P70600|FAK2_RAT Protein tyrosine kinase 2 beta OS=Rattus norv... 33 0.70
sp|Q9QVP9|FAK2_MOUSE Protein tyrosine kinase 2 beta OS=Mus muscu... 32 1.2
sp|Q28317|KIT_CAPHI Mast/stem cell growth factor receptor OS=Cap... 32 1.6
sp|Q8CWX7|UVRB_STRMU UvrABC system protein B OS=Streptococcus mu... 31 3.5
sp|Q7M3Y8|TPM_TURCO Tropomyosin (Fragments) OS=Turbo cornutus PE... 31 3.5
sp|Q9UQP3|TENN_HUMAN Tenascin-N OS=Homo sapiens GN=TNN PE=1 SV=2 31 3.5
sp|Q3URD3|SLMAP_MOUSE Sarcolemmal membrane-associated protein OS... 30 4.5
sp|Q7T019|DZIP1_DANRE Zinc finger protein Dzip1 OS=Danio rerio G... 30 4.5
sp|Q28623|SLMAP_RABIT Sarcolemmal membrane-associated protein OS... 30 5.9
sp|Q08156|KIT_CHICK Mast/stem cell growth factor receptor OS=Gal... 30 5.9
sp|Q07E28|CTTB2_NEONE Cortactin-binding protein 2 OS=Neofelis ne... 30 5.9
sp|Q07E41|CTTB2_DASNO Cortactin-binding protein 2 OS=Dasypus nov... 30 5.9
sp|Q24167|SIMA_DROME Protein similar OS=Drosophila melanogaster ... 30 7.8
sp|A9FD62|LIPA_SORC5 Lipoyl synthase OS=Sorangium cellulosum (st... 30 7.8
sp|Q14289|FAK2_HUMAN Protein tyrosine kinase 2 beta OS=Homo sapi... 30 7.8
sp|O74760|EIF3A_SCHPO Probable eukaryotic translation initiation... 30 7.8

>sp|P70600|FAK2_RAT Protein tyrosine kinase 2 beta OS=Rattus
norvegicus GN=Ptk2b PE=1 SV=1
Length = 1009

Score = 33.1 bits (74), Expect = 0.70
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Frame = -1

Query: 412 EYKLIIPKVSIN-------VLDVKPSDSASVQVLPKAKRK--SRRLAAEVSRDEIVQTDD 260
EY +++ V +N V D+ PS AS + + +K ++ LA +++ + Q +
Sbjct: 905 EYVVVVKNVGLNLRKLIGSVDDLLPSLPASSRTEIEGTQKLLNKDLAELINKMRLAQQNA 964

Query: 259 VAILSLEDCDVEALQARDYQAVDVKDLLE 173
V LS EDC + L A AVD K+LL+
Sbjct: 965 VTSLS-EDCKRQMLTASHTLAVDAKNLLD 992


>sp|Q9QVP9|FAK2_MOUSE Protein tyrosine kinase 2 beta OS=Mus musculus
GN=Ptk2b PE=1 SV=1
Length = 1009

Score = 32.3 bits (72), Expect = 1.2
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Frame = -1

Query: 412 EYKLIIPKVSIN-------VLDVKPSDSASVQVLPKAKRK--SRRLAAEVSRDEIVQTDD 260
+Y +++ V +N V D+ PS AS + + +K ++ LA +++ ++ Q +
Sbjct: 905 DYVVVVKNVGLNLRKLIGSVDDLLPSLPASSRTEIEGTQKLLNKDLAELINKMKLAQQNA 964

Query: 259 VAILSLEDCDVEALQARDYQAVDVKDLLE 173
V LS EDC + L A AVD K+LL+
Sbjct: 965 VTSLS-EDCKRQMLTASHTLAVDAKNLLD 992


>sp|Q28317|KIT_CAPHI Mast/stem cell growth factor receptor OS=Capra
hircus GN=KIT PE=2 SV=1
Length = 978

Score = 32.0 bits (71), Expect = 1.6
Identities = 26/106 (24%), Positives = 46/106 (43%)
Frame = -1

Query: 373 LDVKPSDSASVQVLPKAKRKSRRLAAEVSRDEIVQTDDVAILSLEDCDVEALQARDYQAV 194
+D+KP S V KR+S R+ + + RD A+ D A+
Sbjct: 723 MDMKPGVSYVVPTKAADKRRSARIGSYIERDV----------------TPAIMEDDELAL 766

Query: 193 DVKDLLERMKKLQKQLQFWRTKNWAEKHTGQGHMIPLPTYNQFTKV 56
D++DLL ++ K + F +KN + ++ L T+ + TK+
Sbjct: 767 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI--LLTHGRITKI 810


>sp|Q8CWX7|UVRB_STRMU UvrABC system protein B OS=Streptococcus
mutans GN=uvrB PE=3 SV=1
Length = 663

Score = 30.8 bits (68), Expect = 3.5
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -1

Query: 265 DDVAILSLEDCDVEALQARDYQAVDVKDLLERMKKLQKQLQ 143
D +AI D +V A +A DY A+ + E +KKLQKQ+Q
Sbjct: 599 DLIAITKANDSEV-AEEAVDYNAMTKSERQEAIKKLQKQMQ 638


>sp|Q7M3Y8|TPM_TURCO Tropomyosin (Fragments) OS=Turbo cornutus PE=1
SV=1
Length = 146

Score = 30.8 bits (68), Expect = 3.5
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = -1

Query: 355 DSASVQVLPKAKRKSRRLAAEVSRDEIVQTDDVAILSLEDCDVEALQARDYQAVDVKDLL 176
+ AS + A+RK ++ R E + + SLE + EA Q D ++DL
Sbjct: 44 EEASKYIAEDAERKLAITEVDLERAE-ARLEAAEAKSLEISEQEASQREDSYEETIRDLT 102

Query: 175 ERMK---KLQKQLQFWRTKNWAEK 113
+R+K KLQK++ + AEK
Sbjct: 103 QRLKTVSKLQKEVDRLEDELLAEK 126


>sp|Q9UQP3|TENN_HUMAN Tenascin-N OS=Homo sapiens GN=TNN PE=1 SV=2
Length = 1299

Score = 30.8 bits (68), Expect = 3.5
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Frame = -1

Query: 421 VSVEYKLIIPKVSINVLDVKPS----DSASVQVLPKAKRKSRRLAAEVSRDEIVQTDDVA 254
VS YK+ +PK ++ +D P D AS+ L +A+ + + R + Q
Sbjct: 42 VSHTYKIDVPKSALVQVDADPQPLSDDGASLLALGEAREEQNIIFRHNIRLQTPQ----- 96

Query: 253 ILSLEDCDVEALQARDYQAVDVKDLLERMKKLQKQL 146
+DC++ A V+DLL R+KKL++++
Sbjct: 97 ----KDCEL---------AGSVQDLLARVKKLEEEM 119


>sp|Q3URD3|SLMAP_MOUSE Sarcolemmal membrane-associated protein
OS=Mus musculus GN=Slmap PE=1 SV=2
Length = 845

Score = 30.4 bits (67), Expect = 4.5
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1

Query: 289 SRDEIVQTDDVAILSLEDCDVEALQARDYQAVDVKDLLERMKKLQKQLQFWR 134
+RD+++ D IL L EA+ RD D L E +KK++ +L+ WR
Sbjct: 590 TRDKLLSAQD-EILLLRQAAAEAVSERD---TDFVSLQEELKKVRAELEGWR 637


>sp|Q7T019|DZIP1_DANRE Zinc finger protein Dzip1 OS=Danio rerio
GN=dzip1 PE=2 SV=2
Length = 898

Score = 30.4 bits (67), Expect = 4.5
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = -1

Query: 217 QARDYQAVDVKDLLERMKKLQKQLQFWR 134
Q +DY A K+L++R ++ ++QL+ W+
Sbjct: 272 QQKDYTAKQEKELIQRQEEFKRQLEIWK 299


>sp|Q28623|SLMAP_RABIT Sarcolemmal membrane-associated protein
OS=Oryctolagus cuniculus GN=SLMAP PE=1 SV=2
Length = 771

Score = 30.0 bits (66), Expect = 5.9
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1

Query: 289 SRDEIVQTDDVAILSLEDCDVEALQARDYQAVDVKDLLERMKKLQKQLQFWR 134
+RDE++ D IL L +A RD D+ L E +KK++ +L+ WR
Sbjct: 515 TRDELLSARD-EILLLHQAAEKAASERD---TDIASLQEELKKVRAELERWR 562


>sp|Q08156|KIT_CHICK Mast/stem cell growth factor receptor OS=Gallus
gallus GN=KIT PE=2 SV=1
Length = 960

Score = 30.0 bits (66), Expect = 5.9
Identities = 31/106 (29%), Positives = 51/106 (48%)
Frame = -1

Query: 373 LDVKPSDSASVQVLPKAKRKSRRLAAEVSRDEIVQTDDVAILSLEDCDVEALQARDYQAV 194
+D+KP S +V PKA +K R + + D+ DV + LED D A+
Sbjct: 707 MDMKPGVSYAVP--PKADKK-RPVKSGSYTDQ-----DVTLSMLED---------DELAL 749

Query: 193 DVKDLLERMKKLQKQLQFWRTKNWAEKHTGQGHMIPLPTYNQFTKV 56
DV+DLL ++ K + F +KN + ++ L T+ + TK+
Sbjct: 750 DVEDLLSFSYQVAKGMSFLASKNCIHRDLAARNI--LLTHGRITKI 793


tr_hit_id A4Y1N6
Definition tr|A4Y1N6|A4Y1N6_SHEPC Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
Align length 59
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921579|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_F12.
(490 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4Y1N6|A4Y1N6_SHEPC Diguanylate cyclase/phosphodiesterase wit... 35 1.9
tr|A1RPZ8|A1RPZ8_SHESW Diguanylate cyclase/phosphodiesterase wit... 35 1.9
tr|A2UXT9|A2UXT9_SHEPU Diguanylate cyclase/phosphodiesterase wit... 35 1.9
tr|A3YB29|A3YB29_9GAMM Putative uncharacterized protein OS=Marin... 35 2.4
tr|Q7SYR8|Q7SYR8_XENLA Apacd-prov protein OS=Xenopus laevis GN=t... 34 3.2
tr|Q9XS93|Q9XS93_CANFA Tyrosine-protein kinase receptor OS=Canis... 34 4.2
tr|Q7ZXC0|Q7ZXC0_XENLA Apacd-prov protein (Fragment) OS=Xenopus ... 33 5.5
tr|B4JVF0|B4JVF0_DROGR GH22685 OS=Drosophila grimshawi GN=GH2268... 33 5.5
tr|A6S734|A6S734_BOTFB Predicted protein OS=Botryotinia fuckelia... 33 5.5
tr|B1YG20|B1YG20_EXIS2 Band 7 protein OS=Exiguobacterium sibiric... 33 7.1
tr|B4M4F6|B4M4F6_DROVI GJ10246 OS=Drosophila virilis GN=GJ10246 ... 33 7.1
tr|B5LEN7|B5LEN7_TRYBB ESAG2 type 8 (Fragment) OS=Trypanosoma br... 33 9.3
tr|B5LEN1|B5LEN1_TRYBB ESAG2 type 2 (Fragment) OS=Trypanosoma br... 33 9.3
tr|B4JX48|B4JX48_DROGR GH17882 OS=Drosophila grimshawi GN=GH1788... 33 9.3
tr|Q6C6J7|Q6C6J7_YARLI YALI0E09012p OS=Yarrowia lipolytica GN=YA... 33 9.3

>tr|A4Y1N6|A4Y1N6_SHEPC Diguanylate cyclase/phosphodiesterase with
PAS/PAC sensor(S) OS=Shewanella putrefaciens (strain
CN-32 / ATCC BAA-453) GN=Sputcn32_0133 PE=3 SV=1
Length = 1077

Score = 35.0 bits (79), Expect = 1.9
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1

Query: 91 SYALDPYASLPNS*FSKIVAASATFSFSPINPSHRQLDNHVLGEPQHHNPPVIELQHHQ 267
S+AL A++ N IV A INP+ Q+ + L E + HNP ++ + HQ
Sbjct: 505 SHALSRAAAVFNYSAEGIVVTDAENHIELINPAFTQITGYTLNEIKGHNPSILSAKRHQ 563


>tr|A1RPZ8|A1RPZ8_SHESW Diguanylate cyclase/phosphodiesterase with
PAS/PAC sensor(S) OS=Shewanella sp. (strain W3-18-1)
GN=Sputw3181_3939 PE=3 SV=1
Length = 1077

Score = 35.0 bits (79), Expect = 1.9
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1

Query: 91 SYALDPYASLPNS*FSKIVAASATFSFSPINPSHRQLDNHVLGEPQHHNPPVIELQHHQ 267
S+AL A++ N IV A INP+ Q+ + L E + HNP ++ + HQ
Sbjct: 505 SHALSRAAAVFNYSAEGIVVTDAENHIELINPAFTQITGYTLNEIKGHNPSILSAKRHQ 563


>tr|A2UXT9|A2UXT9_SHEPU Diguanylate cyclase/phosphodiesterase with
PAS/PAC sensor(S) OS=Shewanella putrefaciens 200
GN=Sput200DRAFT_0638 PE=3 SV=1
Length = 1077

Score = 35.0 bits (79), Expect = 1.9
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1

Query: 91 SYALDPYASLPNS*FSKIVAASATFSFSPINPSHRQLDNHVLGEPQHHNPPVIELQHHQ 267
S+AL A++ N IV A INP+ Q+ + L E + HNP ++ + HQ
Sbjct: 505 SHALSRAAAVFNYSAEGIVVTDAENHIELINPAFTQITGYTLNEIKGHNPSILSAKRHQ 563


>tr|A3YB29|A3YB29_9GAMM Putative uncharacterized protein
OS=Marinomonas sp. MED121 GN=MED121_08703 PE=4 SV=1
Length = 82

Score = 34.7 bits (78), Expect = 2.4
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = -1

Query: 325 AKRKSRRLAAEVSRDEIVQTDDVAILSLEDCDVEALQARDYQAVDVKDLLERMKKLQKQL 146
+K S+ + A+V + D + ++S ED DV+A Y+ V +L ERM+KL++QL
Sbjct: 21 SKLPSKEIQAQVQQLAKSTLDKMDLVSREDFDVQAAMLAKYRE-RVIELEERMQKLEQQL 79

Query: 145 Q 143
Q
Sbjct: 80 Q 80


>tr|Q7SYR8|Q7SYR8_XENLA Apacd-prov protein OS=Xenopus laevis
GN=txndc9 PE=2 SV=1
Length = 226

Score = 34.3 bits (77), Expect = 3.2
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = -1

Query: 298 AEVSRDEIVQTDDVAILSLEDCDVEALQARDYQAVDV--KDLLERMKKLQKQLQFWRTKN 125
A+V ++++QT + L D ++E L D +++ + LE +KK+QKQ Q W +K
Sbjct: 11 AKVMENQLLQTAKIMEEQL-DAELEKLDKTDEDEMELLKERRLEALKKVQKQKQEWLSK- 68

Query: 124 WAEKHTGQGHMIPLPTYNQFTKVDVAPDMGMLCYY 20
G G +P+ +F + +V ++C++
Sbjct: 69 ------GHGEYREIPSEREFFQ-EVKESKNVVCHF 96


>tr|Q9XS93|Q9XS93_CANFA Tyrosine-protein kinase receptor OS=Canis
familiaris GN=c-kit PE=2 SV=1
Length = 978

Score = 33.9 bits (76), Expect = 4.2
Identities = 28/106 (26%), Positives = 48/106 (45%)
Frame = -1

Query: 373 LDVKPSDSASVQVLPKAKRKSRRLAAEVSRDEIVQTDDVAILSLEDCDVEALQARDYQAV 194
+D+KP DS V KR+SRR+ + + RD A+ D A+
Sbjct: 724 MDMKPGDSYVVPTKAD-KRRSRRIGSYIERDV----------------TPAIMEDDELAL 766

Query: 193 DVKDLLERMKKLQKQLQFWRTKNWAEKHTGQGHMIPLPTYNQFTKV 56
D++DLL ++ K + F +KN + ++ L T+ + TK+
Sbjct: 767 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI--LLTHGRITKI 810


>tr|Q7ZXC0|Q7ZXC0_XENLA Apacd-prov protein (Fragment) OS=Xenopus
laevis GN=apacd-prov PE=2 SV=1
Length = 263

Score = 33.5 bits (75), Expect = 5.5
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = -1

Query: 298 AEVSRDEIVQTDDVAILSLEDCDVEALQARDYQAVDV--KDLLERMKKLQKQLQFWRTKN 125
A+V ++++QT + L D ++E L D +++ + LE +KK QKQ Q W +K
Sbjct: 48 AKVMENQLLQTAKIMEEQL-DAELEKLDKTDEDEMELLKERRLEALKKAQKQKQEWLSK- 105

Query: 124 WAEKHTGQGHMIPLPTYNQFTKVDVAPDMGMLCYY 20
G G +P+ +F + +V ++C++
Sbjct: 106 ------GHGEYREIPSEREFFQ-EVKESKNVVCHF 133


>tr|B4JVF0|B4JVF0_DROGR GH22685 OS=Drosophila grimshawi GN=GH22685
PE=4 SV=1
Length = 335

Score = 33.5 bits (75), Expect = 5.5
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Frame = -1

Query: 346 SVQVLPKAKRKSRRLAAEVSRDEIVQTDDVAILSLEDCDVEALQARDYQAVDVKDLLERM 167
S+Q + +++S L S+D ++Q+ ++ + RD A++ KDLL+ M
Sbjct: 180 SLQSYAQKEQRSSHLDRRASKDALLQSRHYIFTEARSVSLDRFKRRDDLAIESKDLLKIM 239

Query: 166 KK---LQKQLQFWRTKNWAEKHTGQGHMIPLPTYNQFTKVDVAP 44
+K + + + + +E G+ +PL + V VAP
Sbjct: 240 RKQSTIAEPARIYHPAKLSEPIRGRRLSVPLSI--NYQTVHVAP 281


>tr|A6S734|A6S734_BOTFB Predicted protein OS=Botryotinia fuckeliana
(strain B05.10) GN=BC1G_08609 PE=4 SV=1
Length = 428

Score = 33.5 bits (75), Expect = 5.5
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Frame = -1

Query: 364 KPSDSASVQVLPKAKRKSRRLAAEVSRDEIVQTDDV--------AILSLEDCDVEALQA- 212
K DSA + P + KS R+ EV +E DD A S ++ + EA +A
Sbjct: 167 KRFDSAEPESEPVTEEKSERV--EVGEEEESSDDDAPEEVTTNEAAKSAKEKEKEATKAI 224

Query: 211 RDYQAVDVKDLLERMKKLQKQLQFWRTKNWAEKHTGQGHMIPLPTYNQFTKVDVAP 44
+ +A K E+ L++Q + K + +GQ M+P Q +KV++ P
Sbjct: 225 EEQEAASKKKRQEKAANLKRQAEISNKKRKLDVASGQDEMLPPA---QKSKVEITP 277


>tr|B1YG20|B1YG20_EXIS2 Band 7 protein OS=Exiguobacterium sibiricum
(strain DSM 17290 / JCM 13490 / 255-15) GN=Exig_2958
PE=3 SV=1
Length = 290

Score = 33.1 bits (74), Expect = 7.1
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = -1

Query: 259 VAILSLEDCDVEALQARDYQAVDVKDLLERMKKLQKQL-----QFWRTKNWAEKH---TG 104
+A E VEA A D + ++ + L + K+LQK L Q+ K W K +G
Sbjct: 212 IAKAEAERLRVEAKGAADARLIEAQGLAKAQKELQKTLTEEMIQYEAVKKWDGKSPLVSG 271

Query: 103 QGHMIPLPTYNQFTKVD 53
G M+ LP +Q T +
Sbjct: 272 SGSMVQLPIPDQQTTTE 288