BP921579 |
Clone id |
YMU001_000151_F12 |
Library |
YMU01 |
Length |
490 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000151_F12. |
Accession |
BP921579 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL328Contig1 |
Sequence |
GGACACCTGTCCGAGAGTTGTAGTAGCACAGCATTCCCATATCAGGTGCAACATCCACTT TGGTAAACTGATTGTATGTGGGCAGTGGTATCATATGCCCTTGACCCGTATGCTTCTCTG CCCAATTCTTAGTTCTCCAAAATTGTAGCTGCTTCTGCAACTTTTTCATTCTCTCCAATA AATCCTTCACATCGACAGCTTGATAATCACGTGCTTGGAGAGCCTCAACATCACAATCCT CCAGTGATAGAATTGCAACATCATCAGTCTGCACGATTTCATCTCTGCTCACTTCAGCGG CCAGCCTCCGAGACTTTCTTTTTGCTTTAGGCAGAACTTGTACAGATGCCGAATCAGACG GTTTCACGTCTAACACATTTATAGAGACCTTAGGTATGATTAGTTTGTACTCGACACTGA CAAAATCACTTTCACTTTTAGAGGATCTTGAAGGCTCTGAGAAAATGGGCCTTCCCTCCA CTGATTGTCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P70600 |
Definition |
sp|P70600|FAK2_RAT Protein tyrosine kinase 2 beta OS=Rattus norvegicus |
Align length |
89 |
Score (bit) |
33.1 |
E-value |
0.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A4Y1N6 |
Definition |
tr|A4Y1N6|A4Y1N6_SHEPC Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) |
Align length |
59 |
Score (bit) |
35.0 |
E-value |
1.9 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921579|Adiantum capillus-veneris mRNA, clone: YMU001_000151_F12. (490 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A4Y1N6|A4Y1N6_SHEPC Diguanylate cyclase/phosphodiesterase wit... 35 1.9 tr|A1RPZ8|A1RPZ8_SHESW Diguanylate cyclase/phosphodiesterase wit... 35 1.9 tr|A2UXT9|A2UXT9_SHEPU Diguanylate cyclase/phosphodiesterase wit... 35 1.9 tr|A3YB29|A3YB29_9GAMM Putative uncharacterized protein OS=Marin... 35 2.4 tr|Q7SYR8|Q7SYR8_XENLA Apacd-prov protein OS=Xenopus laevis GN=t... 34 3.2 tr|Q9XS93|Q9XS93_CANFA Tyrosine-protein kinase receptor OS=Canis... 34 4.2 tr|Q7ZXC0|Q7ZXC0_XENLA Apacd-prov protein (Fragment) OS=Xenopus ... 33 5.5 tr|B4JVF0|B4JVF0_DROGR GH22685 OS=Drosophila grimshawi GN=GH2268... 33 5.5 tr|A6S734|A6S734_BOTFB Predicted protein OS=Botryotinia fuckelia... 33 5.5 tr|B1YG20|B1YG20_EXIS2 Band 7 protein OS=Exiguobacterium sibiric... 33 7.1 tr|B4M4F6|B4M4F6_DROVI GJ10246 OS=Drosophila virilis GN=GJ10246 ... 33 7.1 tr|B5LEN7|B5LEN7_TRYBB ESAG2 type 8 (Fragment) OS=Trypanosoma br... 33 9.3 tr|B5LEN1|B5LEN1_TRYBB ESAG2 type 2 (Fragment) OS=Trypanosoma br... 33 9.3 tr|B4JX48|B4JX48_DROGR GH17882 OS=Drosophila grimshawi GN=GH1788... 33 9.3 tr|Q6C6J7|Q6C6J7_YARLI YALI0E09012p OS=Yarrowia lipolytica GN=YA... 33 9.3
>tr|A4Y1N6|A4Y1N6_SHEPC Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=Sputcn32_0133 PE=3 SV=1 Length = 1077
Score = 35.0 bits (79), Expect = 1.9 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +1
Query: 91 SYALDPYASLPNS*FSKIVAASATFSFSPINPSHRQLDNHVLGEPQHHNPPVIELQHHQ 267 S+AL A++ N IV A INP+ Q+ + L E + HNP ++ + HQ Sbjct: 505 SHALSRAAAVFNYSAEGIVVTDAENHIELINPAFTQITGYTLNEIKGHNPSILSAKRHQ 563
>tr|A1RPZ8|A1RPZ8_SHESW Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) OS=Shewanella sp. (strain W3-18-1) GN=Sputw3181_3939 PE=3 SV=1 Length = 1077
Score = 35.0 bits (79), Expect = 1.9 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +1
Query: 91 SYALDPYASLPNS*FSKIVAASATFSFSPINPSHRQLDNHVLGEPQHHNPPVIELQHHQ 267 S+AL A++ N IV A INP+ Q+ + L E + HNP ++ + HQ Sbjct: 505 SHALSRAAAVFNYSAEGIVVTDAENHIELINPAFTQITGYTLNEIKGHNPSILSAKRHQ 563
>tr|A2UXT9|A2UXT9_SHEPU Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) OS=Shewanella putrefaciens 200 GN=Sput200DRAFT_0638 PE=3 SV=1 Length = 1077
Score = 35.0 bits (79), Expect = 1.9 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +1
Query: 91 SYALDPYASLPNS*FSKIVAASATFSFSPINPSHRQLDNHVLGEPQHHNPPVIELQHHQ 267 S+AL A++ N IV A INP+ Q+ + L E + HNP ++ + HQ Sbjct: 505 SHALSRAAAVFNYSAEGIVVTDAENHIELINPAFTQITGYTLNEIKGHNPSILSAKRHQ 563
>tr|A3YB29|A3YB29_9GAMM Putative uncharacterized protein OS=Marinomonas sp. MED121 GN=MED121_08703 PE=4 SV=1 Length = 82
Score = 34.7 bits (78), Expect = 2.4 Identities = 22/61 (36%), Positives = 36/61 (59%) Frame = -1
Query: 325 AKRKSRRLAAEVSRDEIVQTDDVAILSLEDCDVEALQARDYQAVDVKDLLERMKKLQKQL 146 +K S+ + A+V + D + ++S ED DV+A Y+ V +L ERM+KL++QL Sbjct: 21 SKLPSKEIQAQVQQLAKSTLDKMDLVSREDFDVQAAMLAKYRE-RVIELEERMQKLEQQL 79
Query: 145 Q 143 Q Sbjct: 80 Q 80
>tr|Q7SYR8|Q7SYR8_XENLA Apacd-prov protein OS=Xenopus laevis GN=txndc9 PE=2 SV=1 Length = 226
Score = 34.3 bits (77), Expect = 3.2 Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 2/95 (2%) Frame = -1
Query: 298 AEVSRDEIVQTDDVAILSLEDCDVEALQARDYQAVDV--KDLLERMKKLQKQLQFWRTKN 125 A+V ++++QT + L D ++E L D +++ + LE +KK+QKQ Q W +K Sbjct: 11 AKVMENQLLQTAKIMEEQL-DAELEKLDKTDEDEMELLKERRLEALKKVQKQKQEWLSK- 68
Query: 124 WAEKHTGQGHMIPLPTYNQFTKVDVAPDMGMLCYY 20 G G +P+ +F + +V ++C++ Sbjct: 69 ------GHGEYREIPSEREFFQ-EVKESKNVVCHF 96
>tr|Q9XS93|Q9XS93_CANFA Tyrosine-protein kinase receptor OS=Canis familiaris GN=c-kit PE=2 SV=1 Length = 978
Score = 33.9 bits (76), Expect = 4.2 Identities = 28/106 (26%), Positives = 48/106 (45%) Frame = -1
Query: 373 LDVKPSDSASVQVLPKAKRKSRRLAAEVSRDEIVQTDDVAILSLEDCDVEALQARDYQAV 194 +D+KP DS V KR+SRR+ + + RD A+ D A+ Sbjct: 724 MDMKPGDSYVVPTKAD-KRRSRRIGSYIERDV----------------TPAIMEDDELAL 766
Query: 193 DVKDLLERMKKLQKQLQFWRTKNWAEKHTGQGHMIPLPTYNQFTKV 56 D++DLL ++ K + F +KN + ++ L T+ + TK+ Sbjct: 767 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI--LLTHGRITKI 810
>tr|Q7ZXC0|Q7ZXC0_XENLA Apacd-prov protein (Fragment) OS=Xenopus laevis GN=apacd-prov PE=2 SV=1 Length = 263
Score = 33.5 bits (75), Expect = 5.5 Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Frame = -1
Query: 298 AEVSRDEIVQTDDVAILSLEDCDVEALQARDYQAVDV--KDLLERMKKLQKQLQFWRTKN 125 A+V ++++QT + L D ++E L D +++ + LE +KK QKQ Q W +K Sbjct: 48 AKVMENQLLQTAKIMEEQL-DAELEKLDKTDEDEMELLKERRLEALKKAQKQKQEWLSK- 105
Query: 124 WAEKHTGQGHMIPLPTYNQFTKVDVAPDMGMLCYY 20 G G +P+ +F + +V ++C++ Sbjct: 106 ------GHGEYREIPSEREFFQ-EVKESKNVVCHF 133
>tr|B4JVF0|B4JVF0_DROGR GH22685 OS=Drosophila grimshawi GN=GH22685 PE=4 SV=1 Length = 335
Score = 33.5 bits (75), Expect = 5.5 Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 3/104 (2%) Frame = -1
Query: 346 SVQVLPKAKRKSRRLAAEVSRDEIVQTDDVAILSLEDCDVEALQARDYQAVDVKDLLERM 167 S+Q + +++S L S+D ++Q+ ++ + RD A++ KDLL+ M Sbjct: 180 SLQSYAQKEQRSSHLDRRASKDALLQSRHYIFTEARSVSLDRFKRRDDLAIESKDLLKIM 239
Query: 166 KK---LQKQLQFWRTKNWAEKHTGQGHMIPLPTYNQFTKVDVAP 44 +K + + + + +E G+ +PL + V VAP Sbjct: 240 RKQSTIAEPARIYHPAKLSEPIRGRRLSVPLSI--NYQTVHVAP 281
>tr|A6S734|A6S734_BOTFB Predicted protein OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_08609 PE=4 SV=1 Length = 428
Score = 33.5 bits (75), Expect = 5.5 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 9/116 (7%) Frame = -1
Query: 364 KPSDSASVQVLPKAKRKSRRLAAEVSRDEIVQTDDV--------AILSLEDCDVEALQA- 212 K DSA + P + KS R+ EV +E DD A S ++ + EA +A Sbjct: 167 KRFDSAEPESEPVTEEKSERV--EVGEEEESSDDDAPEEVTTNEAAKSAKEKEKEATKAI 224
Query: 211 RDYQAVDVKDLLERMKKLQKQLQFWRTKNWAEKHTGQGHMIPLPTYNQFTKVDVAP 44 + +A K E+ L++Q + K + +GQ M+P Q +KV++ P Sbjct: 225 EEQEAASKKKRQEKAANLKRQAEISNKKRKLDVASGQDEMLPPA---QKSKVEITP 277
>tr|B1YG20|B1YG20_EXIS2 Band 7 protein OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=Exig_2958 PE=3 SV=1 Length = 290
Score = 33.1 bits (74), Expect = 7.1 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 8/77 (10%) Frame = -1
Query: 259 VAILSLEDCDVEALQARDYQAVDVKDLLERMKKLQKQL-----QFWRTKNWAEKH---TG 104 +A E VEA A D + ++ + L + K+LQK L Q+ K W K +G Sbjct: 212 IAKAEAERLRVEAKGAADARLIEAQGLAKAQKELQKTLTEEMIQYEAVKKWDGKSPLVSG 271
Query: 103 QGHMIPLPTYNQFTKVD 53 G M+ LP +Q T + Sbjct: 272 SGSMVQLPIPDQQTTTE 288
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