BP921581 |
Clone id |
YMU001_000151_G03 |
Library |
YMU01 |
Length |
380 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000151_G03. |
Accession |
BP921581 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AACCAGGCTCGAGCATACTCAGAGCGGGTGGGGAAGGCTGTAGAGGATTCCAGGCAGCAA AGCATTGCCTTGGAGCAAGCAAAACAGAAGTTTGCAGAGACAGAAAAAGATCTTACAACT TCTAAGGCTACTTTGCAGGAGGCTACCACTGAGCTTGAGAGGCAGAGGTCTAAGATAATG GAAGCAGAGACACAGCTTGAAAAAGAAAGGTTTGAGAGAAAAAGGCTCCAAGAGGAGCTT GCCGTATTAAACATGAAAGCTGGTCGACTCAATGTGCACCATGATAGTGGGCCTTTGGTT GAGAAGCTGCGCGAGGAAATAAAGGAGTACAAAGCCATACTTAAGTGTGGTATCTGCAAT GACCGCTCAAAGGAAGTGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7XU27 |
Definition |
sp|Q7XU27|BRE1A_ORYSJ E3 ubiquitin-protein ligase BRE1-like 1 OS=Oryza sativa subsp. japonica |
Align length |
126 |
Score (bit) |
102.0 |
E-value |
8.0e-22 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TZ49 |
Definition |
tr|A9TZ49|A9TZ49_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
126 |
Score (bit) |
140.0 |
E-value |
3.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921581|Adiantum capillus-veneris mRNA, clone: YMU001_000151_G03. (380 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TZ49|A9TZ49_PHYPA Predicted protein (Fragment) OS=Physcomit... 140 3e-32 tr|A9S3Z1|A9S3Z1_PHYPA Predicted protein OS=Physcomitrella paten... 138 2e-31 tr|A9TJ88|A9TJ88_PHYPA Predicted protein OS=Physcomitrella paten... 129 5e-29 tr|A9RK65|A9RK65_PHYPA Predicted protein OS=Physcomitrella paten... 127 4e-28 tr|A9TET1|A9TET1_PHYPA Predicted protein OS=Physcomitrella paten... 114 2e-24 tr|B8Q8A6|B8Q8A6_ORYSI SKIP interacting protein 20 OS=Oryza sati... 102 1e-20 tr|B8ASX7|B8ASX7_ORYSI Putative uncharacterized protein OS=Oryza... 102 1e-20 tr|A7PKF0|A7PKF0_VITVI Chromosome chr15 scaffold_19, whole genom... 98 2e-19 tr|A5ALF9|A5ALF9_VITVI Putative uncharacterized protein OS=Vitis... 96 7e-19 tr|A7P033|A7P033_VITVI Chromosome chr6 scaffold_3, whole genome ... 85 2e-15 tr|B8BIA7|B8BIA7_ORYSI Putative uncharacterized protein OS=Oryza... 81 2e-14 tr|B7EV99|B7EV99_ORYSJ cDNA clone:J033149F01, full insert sequen... 81 2e-14 tr|B6SHA4|B6SHA4_MAIZE Putative uncharacterized protein OS=Zea m... 74 3e-12 tr|B3H5S6|B3H5S6_ARATH Uncharacterized protein At1g55255.2 OS=Ar... 73 6e-12 tr|Q7PF85|Q7PF85_ANOGA AGAP007335-PA OS=Anopheles gambiae GN=AGA... 61 2e-08 tr|Q17ND4|Q17ND4_AEDAE Putative uncharacterized protein OS=Aedes... 61 3e-08 tr|B4PIX4|B4PIX4_DROYA GE20535 OS=Drosophila yakuba GN=GE20535 P... 61 3e-08 tr|B4NT10|B4NT10_DROSI GD17597 OS=Drosophila simulans GN=GD17597... 61 3e-08 tr|B4MML7|B4MML7_DROWI GK17536 OS=Drosophila willistoni GN=GK175... 61 3e-08 tr|B4LH60|B4LH60_DROVI GJ13313 OS=Drosophila virilis GN=GJ13313 ... 61 3e-08 tr|B4KWC6|B4KWC6_DROMO GI12042 OS=Drosophila mojavensis GN=GI120... 61 3e-08 tr|B4IZH4|B4IZH4_DROGR GH17039 OS=Drosophila grimshawi GN=GH1703... 61 3e-08 tr|B4HUJ1|B4HUJ1_DROSE GM13896 OS=Drosophila sechellia GN=GM1389... 61 3e-08 tr|B3NC92|B3NC92_DROER GG14111 OS=Drosophila erecta GN=GG14111 P... 61 3e-08 tr|B3M3M0|B3M3M0_DROAN GF10444 OS=Drosophila ananassae GN=GF1044... 61 3e-08 tr|B0W6W5|B0W6W5_CULQU Putative uncharacterized protein OS=Culex... 61 3e-08 tr|Q6ZN99|Q6ZN99_HUMAN cDNA FLJ16291 fis, clone OCBBF2020048, mo... 61 3e-08 tr|B4E313|B4E313_HUMAN cDNA FLJ59150, highly similar to Ubiquiti... 61 3e-08 tr|B4DMM1|B4DMM1_HUMAN cDNA FLJ58265, highly similar to Ubiquiti... 61 3e-08 tr|B4DFU2|B4DFU2_HUMAN cDNA FLJ58158, highly similar to Ubiquiti... 61 3e-08
>tr|A9TZ49|A9TZ49_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_152947 PE=4 SV=1 Length = 852
Score = 140 bits (353), Expect = 3e-32 Identities = 66/126 (52%), Positives = 91/126 (72%) Frame = +1
Query: 1 NQARAYSERVGKAVEDSRQQSIALEQAKQKFAETEKDLTTSKATLQEATTELERQRSKIM 180 +Q R+Y E+ GK ++DSRQ +ALE K K E EK L ++KA L+ A +E + K++ Sbjct: 685 DQIRSYLEQTGKVMDDSRQHILALEALKHKTVEIEKQLVSTKAALEAANRRIEGRGQKLV 744
Query: 181 EAETQLEKERFERKRLQEELAVLNMKAGRLNVHHDSGPLVEKLREEIKEYKAILKCGICN 360 EA+ QL+KERFE++R+Q+EL LN K RL HH+ G +E+L+EEIKEYKAILKCG+C+ Sbjct: 745 EAQQQLDKERFEKRRVQDELEALNNKVARLRSHHEGGSAIERLQEEIKEYKAILKCGVCH 804
Query: 361 DRSKEV 378 D KEV Sbjct: 805 DHPKEV 810
>tr|A9S3Z1|A9S3Z1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_208452 PE=4 SV=1 Length = 846
Score = 138 bits (347), Expect = 2e-31 Identities = 61/126 (48%), Positives = 96/126 (76%) Frame = +1
Query: 1 NQARAYSERVGKAVEDSRQQSIALEQAKQKFAETEKDLTTSKATLQEATTELERQRSKIM 180 +QAR+Y E++GK +++ RQ ++++E ++K AETEK+L + K +L+ +E + K+ Sbjct: 679 DQARSYIEQIGKVMDNGRQHTLSMETLRRKTAETEKELLSVKTSLEATNKRIEDRGHKLA 738
Query: 181 EAETQLEKERFERKRLQEELAVLNMKAGRLNVHHDSGPLVEKLREEIKEYKAILKCGICN 360 EA+ QL+KERFE++R+Q+EL LN K RL HH+ GP +E+L+E+IKEYKAILKC +C+ Sbjct: 739 EAQQQLDKERFEKRRVQDELEALNNKLSRLRSHHERGPAIERLQEDIKEYKAILKCSVCH 798
Query: 361 DRSKEV 378 DR+K+V Sbjct: 799 DRAKDV 804
>tr|A9TJ88|A9TJ88_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_222810 PE=4 SV=1 Length = 844
Score = 129 bits (325), Expect = 5e-29 Identities = 62/122 (50%), Positives = 89/122 (72%) Frame = +1
Query: 4 QARAYSERVGKAVEDSRQQSIALEQAKQKFAETEKDLTTSKATLQEATTELERQRSKIME 183 QAR + KA ++SRQQS A+E AK+K E EK+L+++ + L A LE + K++ Sbjct: 678 QARMLIHELAKATDESRQQSSAMESAKRKAVEMEKELSSANSALAAANQVLEERGQKLLN 737
Query: 184 AETQLEKERFERKRLQEELAVLNMKAGRLNVHHDSGPLVEKLREEIKEYKAILKCGICND 363 + QLEKERFE++R+QEEL VLN+K+ RLN HD GP+VE L+EE+ +YKAIL+C +C+D Sbjct: 738 VKLQLEKERFEKRRVQEELDVLNVKSARLNSLHDGGPMVELLQEELNDYKAILQCSVCHD 797
Query: 364 RS 369 R+ Sbjct: 798 RN 799
>tr|A9RK65|A9RK65_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_115788 PE=4 SV=1 Length = 884
Score = 127 bits (318), Expect = 4e-28 Identities = 64/125 (51%), Positives = 83/125 (66%) Frame = +1
Query: 4 QARAYSERVGKAVEDSRQQSIALEQAKQKFAETEKDLTTSKATLQEATTELERQRSKIME 183 QA + + KA +++RQQS A+E AK+K E EK L++ K L A LE + + Sbjct: 718 QASTFIAHLEKATDENRQQSSAMESAKRKAVEAEKQLSSVKLALDAAHKLLEERGQNFLN 777
Query: 184 AETQLEKERFERKRLQEELAVLNMKAGRLNVHHDSGPLVEKLREEIKEYKAILKCGICND 363 QLEKERF ++R +EEL VLNMK RL HDSGP V++LREEI+ Y+AILKC +C D Sbjct: 778 VNLQLEKERFNKRRAREELEVLNMKITRLQTPHDSGPTVDRLREEIRNYEAILKCSVCQD 837
Query: 364 RSKEV 378 RSKEV Sbjct: 838 RSKEV 842
>tr|A9TET1|A9TET1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_144430 PE=4 SV=1 Length = 884
Score = 114 bits (285), Expect = 2e-24 Identities = 55/125 (44%), Positives = 86/125 (68%), Gaps = 2/125 (1%) Frame = +1
Query: 1 NQARAYSERVGKAVEDSRQQSIALEQAKQKFAETEKDLTTSKATLQEATTELERQRSKIM 180 +QARA+ GKA+++SR QS A+E AK+K E EK+L ++K+ L A LE + +++ Sbjct: 715 DQARAFIHEHGKAIDESRHQSSAMESAKRKAVEMEKELASAKSALAAADKLLEERGQRLL 774
Query: 181 EAETQLEKE--RFERKRLQEELAVLNMKAGRLNVHHDSGPLVEKLREEIKEYKAILKCGI 354 QL KE RFE++R QE+L ++NMK RL+ HD G E+L+E++ +Y+AIL+C + Sbjct: 775 NVNLQLGKESFRFEKRRAQEDLKIVNMKTARLHSLHDVGSTAERLQEQVNDYRAILQCNV 834
Query: 355 CNDRS 369 C+DR+ Sbjct: 835 CHDRN 839
>tr|B8Q8A6|B8Q8A6_ORYSI SKIP interacting protein 20 OS=Oryza sativa subsp. indica GN=SIP20 PE=2 SV=1 Length = 340
Score = 102 bits (253), Expect = 1e-20 Identities = 49/126 (38%), Positives = 77/126 (61%) Frame = +1
Query: 1 NQARAYSERVGKAVEDSRQQSIALEQAKQKFAETEKDLTTSKATLQEATTELERQRSKIM 180 +Q + +S+RVGK ED QQS++L ++K + +D +L + R ++ Sbjct: 173 DQLKMWSDRVGKLQEDGWQQSVSLSNYQRKLVDVHRDAQKLMQSLDGIQANVGSSRLEVA 232
Query: 181 EAETQLEKERFERKRLQEELAVLNMKAGRLNVHHDSGPLVEKLREEIKEYKAILKCGICN 360 + +LEKERF +KR++++L V++ KA L ++EKLR E+KEY+ ILKCGIC+ Sbjct: 233 DLLIELEKERFSKKRIEDDLEVMSRKASSLRAKARESAVLEKLRHEVKEYRGILKCGICH 292
Query: 361 DRSKEV 378 DR KEV Sbjct: 293 DRQKEV 298
>tr|B8ASX7|B8ASX7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16895 PE=4 SV=1 Length = 884
Score = 102 bits (253), Expect = 1e-20 Identities = 49/126 (38%), Positives = 77/126 (61%) Frame = +1
Query: 1 NQARAYSERVGKAVEDSRQQSIALEQAKQKFAETEKDLTTSKATLQEATTELERQRSKIM 180 +Q + +S+RVGK ED QQS++L ++K + +D +L + R ++ Sbjct: 717 DQLKMWSDRVGKLQEDGWQQSVSLSNYQRKLVDVHRDAQKLMQSLDGIQANVGSSRLEVA 776
Query: 181 EAETQLEKERFERKRLQEELAVLNMKAGRLNVHHDSGPLVEKLREEIKEYKAILKCGICN 360 + +LEKERF +KR++++L V++ KA L ++EKLR E+KEY+ ILKCGIC+ Sbjct: 777 DLLIELEKERFSKKRIEDDLEVMSRKASSLRAKARESAVLEKLRHEVKEYRGILKCGICH 836
Query: 361 DRSKEV 378 DR KEV Sbjct: 837 DRQKEV 842
>tr|A7PKF0|A7PKF0_VITVI Chromosome chr15 scaffold_19, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019139001 PE=4 SV=1 Length = 878
Score = 97.8 bits (242), Expect = 2e-19 Identities = 47/126 (37%), Positives = 81/126 (64%) Frame = +1
Query: 1 NQARAYSERVGKAVEDSRQQSIALEQAKQKFAETEKDLTTSKATLQEATTELERQRSKIM 180 +Q + S++V K ED Q L +++ + + ++ +L+E+ +++++ R + Sbjct: 711 DQLKMCSDQVQKLAEDRLQSLGTLANFQKRLLDVTRLSQQARESLEESQSKVDKSRVSLG 770
Query: 181 EAETQLEKERFERKRLQEELAVLNMKAGRLNVHHDSGPLVEKLREEIKEYKAILKCGICN 360 E + +LEKERFE+KR +EEL V+ KA RL + +V+KLR+E++EY+ ILKCGIC+ Sbjct: 771 ELQIELEKERFEKKRTEEELEVVRRKASRLRAQTEGSSIVDKLRQELREYRDILKCGICH 830
Query: 361 DRSKEV 378 +R KEV Sbjct: 831 ERPKEV 836
>tr|A5ALF9|A5ALF9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024412 PE=4 SV=1 Length = 256
Score = 96.3 bits (238), Expect = 7e-19 Identities = 46/125 (36%), Positives = 80/125 (64%) Frame = +1
Query: 1 NQARAYSERVGKAVEDSRQQSIALEQAKQKFAETEKDLTTSKATLQEATTELERQRSKIM 180 +Q + S++V K ED Q L +++ + + ++ +L+E+ +++++ R + Sbjct: 98 DQLKMCSDQVQKLAEDRLQSLGTLANFQKRLLDVTRLSQQARESLEESQSKVDKSRVSLG 157
Query: 181 EAETQLEKERFERKRLQEELAVLNMKAGRLNVHHDSGPLVEKLREEIKEYKAILKCGICN 360 E + +LEKERFE+KR +EEL V+ KA RL + +V+KLR+E++EY+ ILKCGIC+ Sbjct: 158 ELQIELEKERFEKKRTEEELEVVRRKASRLRAQTEGSSIVDKLRQELREYRDILKCGICH 217
Query: 361 DRSKE 375 +R KE Sbjct: 218 ERPKE 222
>tr|A7P033|A7P033_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024749001 PE=4 SV=1 Length = 1652
Score = 84.7 bits (208), Expect = 2e-15 Identities = 47/116 (40%), Positives = 74/116 (63%), Gaps = 1/116 (0%) Frame = +1
Query: 34 KAVEDSRQQSIALEQAKQKFAETEKDLTTSKATLQEATTELERQRSKIMEAETQLEKERF 213 K ++ R +++LE AK + A+ EK+L K+ L + E E+ + K E + +L+ ER Sbjct: 1497 KYTQEDRHLAVSLETAKWELADAEKELKWLKSALASSEKEYEQIQRKKEEVQMELDNERS 1556
Query: 214 ERKRLQEELAVLNMKAGRLNVHHDSGPL-VEKLREEIKEYKAILKCGICNDRSKEV 378 ER +L+EEL LN + ++ +SG ++KL++EIK+ KAILKCG+C DR KEV Sbjct: 1557 ERLKLEEELKELNREIAEMS--SESGEAAIQKLQDEIKDGKAILKCGVCFDRPKEV 1610
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