BP921603
Clone id YMU001_000152_A03
Library
Length 485
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000152_A03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTGGACCACAAGAGTCCTCTTCTCGTGGCTCTGTTGAGAAACCATGGAATGGTAGACTAC
GTACGCAGGTTACTCCACCAACAGGAACAGGGAATGTATCACGAAAAGGAAAGGAAAAGG
TTGATGAACCTCCCTTTATGGTTGATGCATCATCAGGCTTTTCACATGTAGACATGGATT
CAGATGGTTCTGAACAAAGTCTTGATGAGGAATTTGGAATTCCAGCTGTCAGGACACCTG
GTGTAAGGAAAGTACAAGAAGATGCTAGAGGGCAAAGGAGTGACCCGGGACCGCGCAGAT
CTAATAGAGTCAGAAATCCAGTTCAGAAATTGACTTAAGATGGGTATCTAGCGCATCACC
GAGCCTACATGGCTAAGGTGATACAGGATGTGGAGCCCACGTGTTTTGAGGATGCAGTTG
GAAATGTGCATTGGGATGATGCAATGAATGAAGAGATGGCTGCATTAGGAGCAAATGACA
CATGG
■■Homology search results ■■ -
sp_hit_id Q9QZW9
Definition sp|Q9QZW9|MNX1_MOUSE Motor neuron and pancreas homeobox protein 1 OS=Mus musculus
Align length 83
Score (bit) 33.5
E-value 0.52
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921603|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_A03.
(485 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9QZW9|MNX1_MOUSE Motor neuron and pancreas homeobox protein ... 33 0.52
sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein ... 32 1.2
sp|Q62673|PLK1_RAT Serine/threonine-protein kinase PLK1 OS=Rattu... 32 1.2
sp|Q07832|PLK1_MOUSE Serine/threonine-protein kinase PLK1 OS=Mus... 32 1.2
sp|P53350|PLK1_HUMAN Serine/threonine-protein kinase PLK1 OS=Hom... 32 1.5
sp|A3N3D8|CYSI_ACTP2 Sulfite reductase [NADPH] hemoprotein beta-... 32 2.0
sp|P50219|MNX1_HUMAN Motor neuron and pancreas homeobox protein ... 31 2.6
sp|A8FD80|HSLU_BACP2 ATP-dependent hsl protease ATP-binding subu... 31 2.6
sp|Q8VSR0|CYSI_ACTPL Sulfite reductase [NADPH] hemoprotein beta-... 31 2.6
sp|Q8BTI8|SRRM2_MOUSE Serine/arginine repetitive matrix protein ... 31 3.4
sp|Q9HC57|WFDC1_HUMAN WAP four-disulfide core domain protein 1 O... 30 4.4
sp|Q2TA25|PLK1_BOVIN Serine/threonine-protein kinase PLK1 OS=Bos... 30 4.4
sp|Q9Y718|PGLR_PENDI Polygalacturonase OS=Penicillium digitatum ... 30 4.4
sp|Q6AXS8|TPGS2_RAT Tubulin polyglutamylase complex subunit 2 OS... 30 5.7
sp|Q5ZKN3|PHTF2_CHICK Putative homeodomain transcription factor ... 30 5.7
sp|P70459|ERF_MOUSE ETS domain-containing transcription factor E... 25 7.0
sp|P50548|ERF_HUMAN ETS domain-containing transcription factor E... 25 7.0
sp|Q66JT5|TPGS2_MOUSE Tubulin polyglutamylase complex subunit 2 ... 30 7.5
sp|Q82XP4|RUVB_NITEU Holliday junction ATP-dependent DNA helicas... 29 9.8
sp|Q6FKP2|PAN3_CANGA PAB-dependent poly(A)-specific ribonuclease... 29 9.8
sp|Q17Q06|EIF3C_AEDAE Eukaryotic translation initiation factor 3... 29 9.8

>sp|Q9QZW9|MNX1_MOUSE Motor neuron and pancreas homeobox protein 1
OS=Mus musculus GN=Mnx1 PE=2 SV=1
Length = 404

Score = 33.5 bits (75), Expect = 0.52
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Frame = +3

Query: 81 TGTGNVSRKGKEKVDEPPFMVDASSGFSHVDM-DSDGSEQSLD-EEFGIPAVRTPGVRKV 254
TG G K +E++ PP D +SG D+ DSD E D EE P G
Sbjct: 320 TGKGGSEEKTEEELMGPPVSGDKASGRRLRDLRDSDPDEDEDDEEEDNFPYSNGAGAHAA 379

Query: 255 QEDARGQRSDPGPRRSNRVRNPV 323
D + P PR P+
Sbjct: 380 SSDCSSEDDSPPPRLGGPGHQPL 402


>sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2
OS=Homo sapiens GN=SRRM2 PE=1 SV=2
Length = 2752

Score = 32.3 bits (72), Expect = 1.2
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +3

Query: 147 ASSGFSHVDMDSDGSEQSLDEEFGIPAVRTPGVRKVQEDARGQRSDPGPRRSNRVRNPVQ 326
+SS S S S S P+ PG + + + A ++ PG RRS R P+
Sbjct: 2624 SSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPID 2683

Query: 327 KL 332
L
Sbjct: 2684 SL 2685


>sp|Q62673|PLK1_RAT Serine/threonine-protein kinase PLK1 OS=Rattus
norvegicus GN=Plk1 PE=2 SV=1
Length = 603

Score = 32.3 bits (72), Expect = 1.2
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1

Query: 374 SHVGSVMR*IPILSQFLNWISDSIRSARSRVTPLPSSIFLYFPYTR 237
SH S+M+ I +L+ F N++S+ + A + +TP PY R
Sbjct: 467 SHPNSLMKKITLLNYFRNYMSEHLLKAGANITPREGDELARLPYLR 512


>sp|Q07832|PLK1_MOUSE Serine/threonine-protein kinase PLK1 OS=Mus
musculus GN=Plk1 PE=2 SV=2
Length = 603

Score = 32.3 bits (72), Expect = 1.2
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1

Query: 374 SHVGSVMR*IPILSQFLNWISDSIRSARSRVTPLPSSIFLYFPYTR 237
SH S+M+ I +L+ F N++S+ + A + +TP PY R
Sbjct: 467 SHPNSLMKKITLLNYFRNYMSEHLLKAGANITPREGDELARLPYLR 512


>sp|P53350|PLK1_HUMAN Serine/threonine-protein kinase PLK1 OS=Homo
sapiens GN=PLK1 PE=1 SV=1
Length = 603

Score = 32.0 bits (71), Expect = 1.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1

Query: 374 SHVGSVMR*IPILSQFLNWISDSIRSARSRVTPLPSSIFLYFPYTR 237
SH S+M+ I +L F N++S+ + A + +TP PY R
Sbjct: 467 SHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLR 512


>sp|A3N3D8|CYSI_ACTP2 Sulfite reductase [NADPH] hemoprotein
beta-component OS=Actinobacillus pleuropneumoniae
serotype 5b (strain L20) GN=cysI PE=3 SV=1
Length = 588

Score = 31.6 bits (70), Expect = 2.0
Identities = 23/65 (35%), Positives = 30/65 (46%)
Frame = +3

Query: 240 GVRKVQEDARGQRSDPGPRRSNRVRNPVQKLT*DGYLAHHRAYMAKVIQDVEPTCFEDAV 419
GV K Q D G RSD R++ RVR VQ +T DG+ A M + P F +
Sbjct: 296 GVVKTQRDF-GNRSD---RKNARVRYTVQNMTLDGFRAEVERCMNIKFEPTRPYEFTERG 351

Query: 420 GNVHW 434
+ W
Sbjct: 352 DRIGW 356


>sp|P50219|MNX1_HUMAN Motor neuron and pancreas homeobox protein 1
OS=Homo sapiens GN=MNX1 PE=1 SV=2
Length = 403

Score = 31.2 bits (69), Expect = 2.6
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +3

Query: 84 GTGNVSRKGKEKVDEPPFMVDASSGFSHVDM-DSDGSE-QSLDEEFGIPAVRTPGVRKVQ 257
G G G E++ PP D SG D+ DSD E + D+E P V
Sbjct: 323 GKGGAEEPGAEELLGPPAPGDKGSGXRLRDLRDSDPEEDEDEDDEDHFPYSNGASVHAAS 382

Query: 258 EDARGQRSDPGPRRSNR 308
D + P PR S++
Sbjct: 383 SDCSSEDDSPPPRPSHQ 399


>sp|A8FD80|HSLU_BACP2 ATP-dependent hsl protease ATP-binding subunit
hslU OS=Bacillus pumilus (strain SAFR-032) GN=hslU PE=3
SV=1
Length = 466

Score = 31.2 bits (69), Expect = 2.6
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 17/110 (15%)
Frame = +3

Query: 54 RLRTQVTP-------PTGTGNVSRKGK-EKVDEPPFMVDASSGFSHVDMDSDGSEQSLDE 209
+L+ +V P PTG G + K+ PF+ ++ F+ V E + +
Sbjct: 45 KLKDEVVPKNILMIGPTGVGKTEIARRIAKISGAPFIKVEATKFTEVGYVGRDVESMVRD 104

Query: 210 --EFGIPAVRTPGVRKVQEDARGQRSD-------PGPRRSNRVRNPVQKL 332
E I V+ ++ VQE+A Q + PG ++S V+NP + L
Sbjct: 105 LVETAIRIVKEDKMKDVQEEAEKQANKRLVHLLVPGKKKSQSVKNPFEML 154


>sp|Q8VSR0|CYSI_ACTPL Sulfite reductase [NADPH] hemoprotein
beta-component OS=Actinobacillus pleuropneumoniae
GN=cysI PE=3 SV=1
Length = 588

Score = 31.2 bits (69), Expect = 2.6
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +3

Query: 240 GVRKVQEDARGQRSDPGPRRSNRVRNPVQKLT*DGYLAHHRAYMAKVIQDVEPTCFEDAV 419
GV K Q D G RSD R++ RVR +Q +T DG+ A M + P F +
Sbjct: 296 GVVKTQRDF-GNRSD---RKNARVRYTIQNMTLDGFRAEVERCMNIKFEPTRPYEFTERG 351

Query: 420 GNVHW 434
+ W
Sbjct: 352 DRIGW 356


>sp|Q8BTI8|SRRM2_MOUSE Serine/arginine repetitive matrix protein 2
OS=Mus musculus GN=Srrm2 PE=1 SV=2
Length = 2703

Score = 30.8 bits (68), Expect = 3.4
Identities = 22/109 (20%), Positives = 41/109 (37%)
Frame = +3

Query: 6 PQESSSRGSVEKPWNGRLRTQVTPPTGTGNVSRKGKEKVDEPPFMVDASSGFSHVDMDSD 185
P+E+ G ++P + + + + + + + S +SS S S
Sbjct: 2540 PKEAIREGRPQEPTPAKRKRRSSSSSSSSSSSSSSSSS---------SSSSSSSSSSSSS 2590

Query: 186 GSEQSLDEEFGIPAVRTPGVRKVQEDARGQRSDPGPRRSNRVRNPVQKL 332
S S P+ PG + + + A ++ PG R S R P+ L
Sbjct: 2591 SSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERGSRSPRKPIDSL 2639


tr_hit_id A5AIJ8
Definition tr|A5AIJ8|A5AIJ8_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 47
Score (bit) 56.2
E-value 8.0e-07
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921603|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_A03.
(485 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5AIJ8|A5AIJ8_VITVI Putative uncharacterized protein OS=Vitis... 56 8e-07
tr|A5BEI8|A5BEI8_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-06
tr|A5ART6|A5ART6_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-06
tr|A5BLV0|A5BLV0_VITVI Putative uncharacterized protein OS=Vitis... 54 3e-06
tr|Q8L700|Q8L700_ARATH Putative uncharacterized protein (Putativ... 50 6e-05
tr|O22175|O22175_ARATH Putative retroelement pol polyprotein OS=... 50 6e-05
tr|A5BPL3|A5BPL3_VITVI Putative uncharacterized protein OS=Vitis... 48 3e-04
tr|A5BA39|A5BA39_VITVI Putative uncharacterized protein OS=Vitis... 47 4e-04
tr|A5CBQ4|A5CBQ4_VITVI Putative uncharacterized protein OS=Vitis... 47 5e-04
tr|A5B7X7|A5B7X7_VITVI Putative uncharacterized protein OS=Vitis... 47 5e-04
tr|Q9ZPU4|Q9ZPU4_ARATH Putative retroelement pol polyprotein OS=... 45 0.001
tr|Q01M93|Q01M93_ORYSA OSIGBa0146N20.7 protein OS=Oryza sativa G... 45 0.001
tr|A5BVX7|A5BVX7_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002
tr|A5AHP9|A5AHP9_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002
tr|A5BNR5|A5BNR5_VITVI Putative uncharacterized protein OS=Vitis... 44 0.003
tr|A5B919|A5B919_VITVI Putative uncharacterized protein OS=Vitis... 44 0.004
tr|Q01J50|Q01J50_ORYSA OSIGBa0145M07.7 protein OS=Oryza sativa G... 44 0.005
tr|A5BZM8|A5BZM8_VITVI Putative uncharacterized protein OS=Vitis... 44 0.005
tr|A5ARV9|A5ARV9_VITVI Putative uncharacterized protein OS=Vitis... 44 0.005
tr|A5BHT9|A5BHT9_VITVI Putative uncharacterized protein OS=Vitis... 43 0.007
tr|Q0KIU3|Q0KIU3_SOLDE Integrase core domain containing protein ... 42 0.012
tr|Q9SJ99|Q9SJ99_ARATH Putative retroelement pol polyprotein OS=... 42 0.015
tr|A5AVY9|A5AVY9_VITVI Putative uncharacterized protein OS=Vitis... 42 0.015
tr|O81903|O81903_ARATH Putative transposable element OS=Arabidop... 42 0.020
tr|Q9FL75|Q9FL75_ARATH Retroelement pol polyprotein-like OS=Arab... 41 0.026
tr|O65452|O65452_ARATH LTR retrotransposon like protein OS=Arabi... 41 0.026
tr|A5BI31|A5BI31_VITVI Putative uncharacterized protein OS=Vitis... 41 0.026
tr|A5ALK4|A5ALK4_VITVI Putative uncharacterized protein OS=Vitis... 41 0.026
tr|A5AE14|A5AE14_VITVI Putative uncharacterized protein OS=Vitis... 41 0.026
tr|Q9ZVE4|Q9ZVE4_ARATH Putative retroelement pol polyprotein OS=... 41 0.033

>tr|A5AIJ8|A5AIJ8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_031733 PE=4 SV=1
Length = 1322

Score = 56.2 bits (134), Expect = 8e-07
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +3

Query: 345 YLAHHRAYMAKVIQDVEPTCFEDAVGNVHWDDAMNEEMAALGANDTW 485
Y HR++ A V QD+EPT + +A + HW +AM E+AAL AN TW
Sbjct: 818 YSPQHRSFTAAVSQDIEPTSYAEAASHSHWQEAMQSELAALEANHTW 864


>tr|A5BEI8|A5BEI8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_043423 PE=4 SV=1
Length = 1059

Score = 54.7 bits (130), Expect = 2e-06
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3

Query: 345 YLAHHRAYMAKVIQDVEPTCFEDAVGNVHWDDAMNEEMAALGANDTW 485
Y HR++ V QD+EPT + +A + HW +AM E+AAL AN TW
Sbjct: 910 YSPQHRSFTTAVSQDIEPTSYAEAASHSHWQEAMQSELAALEANHTW 956


>tr|A5ART6|A5ART6_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_028058 PE=4 SV=1
Length = 1125

Score = 54.7 bits (130), Expect = 2e-06
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3

Query: 345 YLAHHRAYMAKVIQDVEPTCFEDAVGNVHWDDAMNEEMAALGANDTW 485
Y HR++ A V QD+EPT + +A + HW +AM E+A L AN TW
Sbjct: 613 YSPQHRSFTAAVSQDIEPTSYAEATSHSHWQEAMQSELATLEANHTW 659


>tr|A5BLV0|A5BLV0_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_033389 PE=4 SV=1
Length = 1279

Score = 54.3 bits (129), Expect = 3e-06
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3

Query: 345 YLAHHRAYMAKVIQDVEPTCFEDAVGNVHWDDAMNEEMAALGANDTW 485
Y HR++ A V QD+EPT + + + HW +AM E+AAL AN TW
Sbjct: 795 YSPQHRSFTAAVSQDIEPTSYAEXASHSHWQEAMQSELAALEANHTW 841


>tr|Q8L700|Q8L700_ARATH Putative uncharacterized protein (Putative
retroelement pol polyprotein) (At2g23330) OS=Arabidopsis
thaliana GN=At2g23330 PE=2 SV=1
Length = 776

Score = 50.1 bits (118), Expect = 6e-05
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +3

Query: 330 LT*DGYLAHHRAYMAKVIQDVEPTCFEDAVGNVHWDDAMNEEMAALGANDTW 485
LT GY A+H A+MA ++ EP F+DA+ W +AM++E+ AL AN TW
Sbjct: 245 LTNSGYSANHIAFMAAILDSNEPKHFKDAILIKEWCEAMSKEIDALEANHTW 296


>tr|O22175|O22175_ARATH Putative retroelement pol polyprotein
OS=Arabidopsis thaliana GN=At2g23330 PE=2 SV=1
Length = 1496

Score = 50.1 bits (118), Expect = 6e-05
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +3

Query: 330 LT*DGYLAHHRAYMAKVIQDVEPTCFEDAVGNVHWDDAMNEEMAALGANDTW 485
LT GY A+H A+MA ++ EP F+DA+ W +AM++E+ AL AN TW
Sbjct: 965 LTNSGYSANHIAFMAAILDSNEPKHFKDAILIKEWCEAMSKEIDALEANHTW 1016


>tr|A5BPL3|A5BPL3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_028741 PE=4 SV=1
Length = 1262

Score = 47.8 bits (112), Expect = 3e-04
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3

Query: 285 PGPRRSNRVRNPVQK-LT*DGYLAHHRAYMAKVIQDVEPTCFEDAVGNVHWDDAMNEEMA 461
P P+ + P+ + D + H+R ++A +I +P F++A+ +V W +M+EE+
Sbjct: 770 PSPQHPSGTPYPIAHYINCDNFSVHYRKFLAAIISSNDPKSFKEAIKDVGWXKSMHEEIL 829

Query: 462 ALGANDTW 485
AL N TW
Sbjct: 830 ALEENGTW 837


>tr|A5BA39|A5BA39_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_041694 PE=4 SV=1
Length = 1099

Score = 47.4 bits (111), Expect = 4e-04
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3

Query: 285 PGPRRSNRVRNPVQK-LT*DGYLAHHRAYMAKVIQDVEPTCFEDAVGNVHWDDAMNEEMA 461
P P+ + P+ + D + H+R ++A +I +P F++A+ +V W +M+EE+
Sbjct: 552 PSPQHPSGTPYPIAHYINCDNFSVHYRKFLATIISSNDPKSFKEAMKDVGWQKSMHEEIR 611

Query: 462 ALGANDTW 485
AL N TW
Sbjct: 612 ALEENGTW 619


>tr|A5CBQ4|A5CBQ4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_013115 PE=4 SV=1
Length = 1178

Score = 47.0 bits (110), Expect = 5e-04
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3

Query: 285 PGPRRSNRVRNPVQK-LT*DGYLAHHRAYMAKVIQDVEPTCFEDAVGNVHWDDAMNEEMA 461
P P+ + P+ + D + H+R ++A +I +P F++A+ +V W +M+EE+
Sbjct: 631 PXPQHPSGTPYPIAHYINCDNFSVHYRKFLATIISSNDPKSFKEAMKDVGWQKSMHEEIR 690

Query: 462 ALGANDTW 485
AL N TW
Sbjct: 691 ALEENGTW 698


>tr|A5B7X7|A5B7X7_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_017631 PE=4 SV=1
Length = 1191

Score = 47.0 bits (110), Expect = 5e-04
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3

Query: 285 PGPRRSNRVRNPVQK-LT*DGYLAHHRAYMAKVIQDVEPTCFEDAVGNVHWDDAMNEEMA 461
P P+ + P+ + D + H+R ++A +I +P F++A+ +V W +M+EE+
Sbjct: 626 PFPQHPSSTPYPIAHYINCDNFSVHYRKFLAAIISSNDPKSFKEAMKDVSWQKSMHEEIR 685

Query: 462 ALGANDTW 485
AL N TW
Sbjct: 686 ALEENGTW 693