| BP921604 |
| Clone id |
YMU001_000152_A04 |
| Library |
YMU01 |
| Length |
544 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000152_A04. |
| Accession |
BP921604 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
CAGAGGATCTTATGGAAAGTATACCATTTGTTCTGGATATTATTGGATGGACCTCCTTGC
TTGGCTCTTGTAATGCACATAACGATGTGACATTAGGAGAACGCTGCTTCGATAGGGTGC
TCGACAAAGGGGGTTGTGCGACTGCTTATACATTGATGTCTAGCATCTATGCCAGTGCAG
GTCTGGAAAAGGATGCAGCAAGAATACAAGACATGAGAAGGTTCTCAAGAGTATGGAAAA
AGCCTGCAAAGGCTTACATTGAGGTTGAGAATCAGGTACATTCCTTCCTGGTTGGAGATG
ACAGCCATCCACGATCAGATGATGTCTATGCTAAACTTAAATCCTTAAATGCAGCCAAGA
GAGGGGCTGAGTATCAACATTCCAATACCATAGTTGCAAAAGACAAAGTAGATTATAGTT
GTGGGCATTCGGAGAAACTAGCCATAGCCTTTGGGCTCATAAGCACTCCTCAAGGCACAA
CCATCCGGGTAGGCAAAAACTTGAGGGTATGTCCTGATTGCCATACAGCAGCAAAGTTCA
TTTC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9SHZ8 |
| Definition |
sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana |
| Align length |
189 |
| Score (bit) |
130.0 |
| E-value |
5.0e-30 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921604|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_A04.
(544 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protei... 130 5e-30
sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protei... 129 7e-30
sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containi... 128 2e-29
sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containi... 128 2e-29
sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protei... 127 3e-29
sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protei... 127 5e-29
sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protei... 127 5e-29
sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protei... 125 2e-28
sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containi... 124 2e-28
sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protei... 122 9e-28
sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protei... 122 1e-27
sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protei... 120 3e-27
sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protei... 119 7e-27
sp|Q9LFL5|PP390_ARATH Putative pentatricopeptide repeat-containi... 118 2e-26
sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protei... 118 2e-26
sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protei... 116 8e-26
sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protei... 115 1e-25
sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protei... 115 1e-25
sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containi... 115 1e-25
sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containi... 115 1e-25
sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protei... 114 2e-25
sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protei... 114 4e-25
sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protei... 113 7e-25
sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protei... 112 9e-25
sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protei... 111 2e-24
sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protei... 111 3e-24
sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protei... 110 3e-24
sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protei... 110 3e-24
sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containi... 110 3e-24
sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protei... 110 4e-24
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein
At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=2 SV=1
Length = 786
Score = 130 bits (326), Expect = 5e-30
Identities = 72/189 (38%), Positives = 112/189 (59%), Gaps = 9/189 (4%)
Frame = +3
Query: 3 EDLMESIPFVLDIIGWTSLLGSCNAHNDVTLGERCFDRVL----DKGGCATAYTLMSSIY 170
++ +E +P D++ W SLL +C H ++ LG+ +R+L + G AY+ ++++Y
Sbjct: 571 QEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSG---AYSALANLY 627
Query: 171 ASAGLEKDAARIQDMRRFSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLN 350
++ G ++AA+I+ + RV K+ ++IEV+++VH F V D +HP +++Y +K +
Sbjct: 628 SACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIW 687
Query: 351 AAKRGAEYQHSNTIVAKD-----KVDYSCGHSEKLAIAFGLISTPQGTTIRVGKNLRVCP 515
+ Y V D K HSEKLAIAFGLISTP TT+R+ KNLRVC
Sbjct: 688 DEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCN 747
Query: 516 DCHTAAKFI 542
DCHTA KFI
Sbjct: 748 DCHTAIKFI 756
>sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein
At3g47530 OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1
Length = 591
Score = 129 bits (325), Expect = 7e-30
Identities = 70/185 (37%), Positives = 107/185 (57%), Gaps = 7/185 (3%)
Frame = +3
Query: 9 LMESIPFVLDIIGWTSLLGSCNAHNDVTLGERCFDRVLD-KGGCATAYTLMSSIYASAGL 185
L++S+ D W +LLG+C H DV LGER +++ K A Y L+ + Y++ G
Sbjct: 377 LIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGK 436
Query: 186 EKDAARIQDMRRFSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNAAKRG 365
+ ++ + + R+ KP + IE++ VH F+V D SHPR +++Y L +N +
Sbjct: 437 WEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKI 496
Query: 366 AEY-----QHSNTIVAKDKVDYSCG-HSEKLAIAFGLISTPQGTTIRVGKNLRVCPDCHT 527
A Y + + ++++ Y+ HSEKLAIAFG++ TP GTTIRV KNLR C DCH
Sbjct: 497 AGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHN 556
Query: 528 AAKFI 542
AKF+
Sbjct: 557 FAKFV 561
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing
protein At2g01510 OS=Arabidopsis thaliana GN=PCMP-H36
PE=3 SV=1
Length = 825
Score = 128 bits (321), Expect = 2e-29
Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 7/187 (3%)
Frame = +3
Query: 3 EDLMESIPFVLDIIGWTSLLGSCNAHNDVTLGERCFDRV--LDKGGCATAYTLMSSIYAS 176
E LM+ +PF D I W+S+L +C H + +L ER +++ ++K A AY MS+IYA+
Sbjct: 609 EKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAA 668
Query: 177 AGLEKDAARIQDMRRFSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNAA 356
AG + ++ R + K PA +++EV +++H F D +HP D++ K+ L A
Sbjct: 669 AGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAE 728
Query: 357 KRGAEYQHSNTIVAKD-----KVDYSCGHSEKLAIAFGLISTPQGTTIRVGKNLRVCPDC 521
Y+ + V +D K++ HSE+LA+AF LISTP+G I V KNLR C DC
Sbjct: 729 IEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDC 788
Query: 522 HTAAKFI 542
H A K I
Sbjct: 789 HAAIKLI 795
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing
protein At1g68930 OS=Arabidopsis thaliana GN=PCMP-H22
PE=3 SV=1
Length = 743
Score = 128 bits (321), Expect = 2e-29
Identities = 75/183 (40%), Positives = 105/183 (57%), Gaps = 6/183 (3%)
Frame = +3
Query: 12 MESIPFVLDIIGWTSLLGSCNAHNDVTLGERCFDRVLDKGGCATA-YTLMSSIYASAGLE 188
+ +PF D IGWT+LL +C ++ +G+ + +++ A YTL+SSIYAS G
Sbjct: 531 INGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKW 590
Query: 189 KDAARIQDMRRFSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNAAKRGA 368
A+++ R V K+P +++I+ + ++HSF D+S P D +YAKL+ LN
Sbjct: 591 DSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDN 650
Query: 369 EYQHSNTIVAKD-----KVDYSCGHSEKLAIAFGLISTPQGTTIRVGKNLRVCPDCHTAA 533
Y+ + V D KV HSE+LAIAFGLI P G IRVGKNLRVC DCH A
Sbjct: 651 GYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNAT 710
Query: 534 KFI 542
K I
Sbjct: 711 KHI 713
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein
At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 127 bits (320), Expect = 3e-29
Identities = 75/185 (40%), Positives = 107/185 (57%), Gaps = 6/185 (3%)
Frame = +3
Query: 6 DLMESIPFVLDIIGWTSLLGSCNAHNDVTLGERCFDRVLD-KGGCATAYTLMSSIYASAG 182
+ ++S+P +++ W +LLG+C H D L E ++L + + Y L+S++YAS
Sbjct: 381 EYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQ 440
Query: 183 LEKDAARIQDMRRFSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNAAKR 362
D +I+ V K P + +EV N+VH FL+GD SHP+SD +YAKLK + R
Sbjct: 441 RWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLR 500
Query: 363 GAEY--QHSNTIV---AKDKVDYSCGHSEKLAIAFGLISTPQGTTIRVGKNLRVCPDCHT 527
Y Q SN V ++K + HSEK+AIAF LISTP+ + I V KNLRVC DCH
Sbjct: 501 SEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHL 560
Query: 528 AAKFI 542
A K +
Sbjct: 561 AIKLV 565
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein
At1g25360 OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 127 bits (318), Expect = 5e-29
Identities = 72/190 (37%), Positives = 107/190 (56%), Gaps = 10/190 (5%)
Frame = +3
Query: 3 EDLMESIPFVLDIIGWTSLLGSCNAHNDVTLG----ERCFDRVLDKGGCATAYTLMSSIY 170
E ++ES+PF W +LL C H ++ LG ++ F + + G Y L+S+++
Sbjct: 574 ESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDG---TYMLLSNMH 630
Query: 171 ASAGLEKDAARIQDMRRFSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLN 350
A+ G ++ AR++ + R V K+ A ++IE+E QVH+FLV D SHP ++ VY L+ L
Sbjct: 631 AATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLG 690
Query: 351 AAKRGAEYQHSNTIVAKD------KVDYSCGHSEKLAIAFGLISTPQGTTIRVGKNLRVC 512
R Y + V D K D HSEK+A+AFGL+ P GTTIR+ KNLR C
Sbjct: 691 KEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTC 750
Query: 513 PDCHTAAKFI 542
DCH +F+
Sbjct: 751 GDCHNFFRFL 760
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic OS=Arabidopsis thaliana
GN=PCMP-H81 PE=2 SV=2
Length = 890
Score = 127 bits (318), Expect = 5e-29
Identities = 74/185 (40%), Positives = 108/185 (58%), Gaps = 7/185 (3%)
Frame = +3
Query: 9 LMESIPFVLDIIG-WTSLLGSCNAHNDVTLGERCFDRVLD-KGGCATAYTLMSSIYASAG 182
LM +P + G W+SLLG+ HN++ +GE ++ + A+ Y L+++IY+SAG
Sbjct: 676 LMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAG 735
Query: 183 LEKDAARIQDMRRFSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNAAKR 362
L A ++ + V K+P ++IE ++VH F+ GD SHP+S+ + L++L R
Sbjct: 736 LWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMR 795
Query: 363 GAEYQHSNTIVAK-----DKVDYSCGHSEKLAIAFGLISTPQGTTIRVGKNLRVCPDCHT 527
Y + V +K CGHSEKLAIAFG+++T GT IRV KNLRVC DCH
Sbjct: 796 KEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHL 855
Query: 528 AAKFI 542
A KFI
Sbjct: 856 ATKFI 860
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein
At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 125 bits (313), Expect = 2e-28
Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 6/184 (3%)
Frame = +3
Query: 9 LMESIPFVLDIIGWTSLLGSCNAHNDVTLGERCFDRVLD-KGGCATAYTLMSSIYASAGL 185
++E++P W ++L +C H LG ++++ K + AY L+S++YA +G
Sbjct: 654 VIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGD 713
Query: 186 EKDAARIQDMRRFSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNAAKRG 365
++ A+++ + V K+P ++IEV+N+ +SFL GD SHP D +Y KL+ L+ +
Sbjct: 714 WQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKD 773
Query: 366 AEYQHSNTIVAKD-----KVDYSCGHSEKLAIAFGLISTPQGTTIRVGKNLRVCPDCHTA 530
Y+ + V +D K HSE+LAIAFGLI+TP+G+ + + KNLRVC DCH
Sbjct: 774 LGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLV 833
Query: 531 AKFI 542
K I
Sbjct: 834 IKLI 837
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing
protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32
PE=3 SV=1
Length = 715
Score = 124 bits (312), Expect = 2e-28
Identities = 69/172 (40%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Frame = +3
Query: 48 WTSLLGSCNAHNDVTLGERCFDRV--LDKGGCATAYTLMSSIYASAGLEKDAARIQDMRR 221
W++LL SC+ H ++ L E+ +++ +D AY LM ++YAS G K+ A+++ R
Sbjct: 515 WSTLLSSCSVHKNLELAEKVAEKIFTVDSENMG-AYVLMCNMYASNGRWKEMAKLRLRMR 573
Query: 222 FSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNAAKRGAEYQHSNTIVAK 401
+ KKPA ++IE++N+ H F+ GD SHP D + LK++ Y + V
Sbjct: 574 KKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLH 633
Query: 402 D-----KVDYSCGHSEKLAIAFGLISTPQGTTIRVGKNLRVCPDCHTAAKFI 542
D K + GHSE+LA+AFG+I+T GTTIRV KN+R+C DCH A KFI
Sbjct: 634 DVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFI 685
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial OS=Arabidopsis thaliana
GN=PCMP-H34 PE=2 SV=1
Length = 659
Score = 122 bits (307), Expect = 9e-28
Identities = 73/186 (39%), Positives = 102/186 (54%), Gaps = 7/186 (3%)
Frame = +3
Query: 6 DLMESIPFVLDIIGWTSLLGSCNAHNDVTLGERCFDRV--LDKGGCATAYTLMSSIYASA 179
DL++ + D I W+SLL +C H +V L E R+ LD C Y L+S IYA A
Sbjct: 445 DLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGY-YMLLSHIYADA 503
Query: 180 GLEKDAARIQDMRRFSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNAAK 359
G KD R++ + + + K P + +E+ +VH FL+GD+ HP+ + +Y L LN
Sbjct: 504 GRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKL 563
Query: 360 RGAEYQHSNTIVAKD-----KVDYSCGHSEKLAIAFGLISTPQGTTIRVGKNLRVCPDCH 524
A Y + + V D K HSEKLAIAFG+++T G+T+ V KNLRVC DCH
Sbjct: 564 LEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCH 623
Query: 525 TAAKFI 542
K I
Sbjct: 624 NVIKLI 629
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9T938 |
| Definition |
tr|A9T938|A9T938_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
186 |
| Score (bit) |
149.0 |
| E-value |
7.0e-35 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921604|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_A04.
(544 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9T938|A9T938_PHYPA Predicted protein OS=Physcomitrella paten... 149 7e-35
tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea... 149 7e-35
tr|A7P2L5|A7P2L5_VITVI Chromosome chr1 scaffold_5, whole genome ... 148 2e-34
tr|Q5W963|Q5W963_PHYPA PPR1106-17 OS=Physcomitrella patens PE=2 ... 145 2e-33
tr|A9T5P5|A9T5P5_PHYPA Predicted protein OS=Physcomitrella paten... 145 2e-33
tr|B3U1U3|B3U1U3_ISOEN Pentatricopeptide repeat protein (Fragmen... 143 5e-33
tr|A7P7A8|A7P7A8_VITVI Chromosome chr9 scaffold_7, whole genome ... 141 2e-32
tr|A7QPS9|A7QPS9_VITVI Chromosome chr10 scaffold_138, whole geno... 140 6e-32
tr|A7P4F3|A7P4F3_VITVI Chromosome chr4 scaffold_6, whole genome ... 140 6e-32
tr|A5B2K7|A5B2K7_VITVI Putative uncharacterized protein OS=Vitis... 140 6e-32
tr|Q5W965|Q5W965_PHYPA PPR868-14 OS=Physcomitrella patens PE=2 SV=1 139 7e-32
tr|A9SDQ1|A9SDQ1_PHYPA Predicted protein OS=Physcomitrella paten... 139 7e-32
tr|A9T8E9|A9T8E9_PHYPA Predicted protein OS=Physcomitrella paten... 139 1e-31
tr|B6SSC4|B6SSC4_MAIZE Pentatricopeptide repeat protein PPR868-1... 139 1e-31
tr|Q6L4I3|Q6L4I3_ORYSJ Os05g0212100 protein OS=Oryza sativa subs... 138 2e-31
tr|A7QRN2|A7QRN2_VITVI Chromosome undetermined scaffold_151, who... 138 2e-31
tr|A7PPB6|A7PPB6_VITVI Chromosome chr8 scaffold_23, whole genome... 138 2e-31
tr|A2Y1K2|A2Y1K2_ORYSI Putative uncharacterized protein OS=Oryza... 137 5e-31
tr|A7R0D7|A7R0D7_VITVI Chromosome chr6 scaffold_305, whole genom... 136 6e-31
tr|A5BJS3|A5BJS3_VITVI Putative uncharacterized protein OS=Vitis... 136 8e-31
tr|Q2QU89|Q2QU89_ORYSJ Os12g0270200 protein OS=Oryza sativa subs... 135 1e-30
tr|B8YEK4|B8YEK4_ORYSJ Pentatricopeptide repeat protein OS=Oryza... 135 1e-30
tr|B8YEK3|B8YEK3_ORYSJ Pentatricopeptide repeat protein OS=Oryza... 135 1e-30
tr|B8AZL5|B8AZL5_ORYSI Putative uncharacterized protein OS=Oryza... 135 1e-30
tr|A9U4W7|A9U4W7_PHYPA Predicted protein OS=Physcomitrella paten... 135 1e-30
tr|A3B1G2|A3B1G2_ORYSJ Putative uncharacterized protein OS=Oryza... 135 1e-30
tr|A9RJW2|A9RJW2_PHYPA Predicted protein OS=Physcomitrella paten... 135 1e-30
tr|A7PX41|A7PX41_VITVI Chromosome chr12 scaffold_36, whole genom... 135 1e-30
tr|A7PWA0|A7PWA0_VITVI Chromosome chr8 scaffold_34, whole genome... 135 1e-30
tr|A7PPB5|A7PPB5_VITVI Chromosome chr8 scaffold_23, whole genome... 135 2e-30
>tr|A9T938|A9T938_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_192787 PE=4 SV=1
Length = 804
Score = 149 bits (377), Expect = 7e-35
Identities = 79/186 (42%), Positives = 113/186 (60%), Gaps = 6/186 (3%)
Frame = +3
Query: 3 EDLMESIPFVLDIIGWTSLLGSCNAHNDVTLGERCFDRVLD-KGGCATAYTLMSSIYASA 179
ED++ +IP W +LL +C H +V +GER + L + A Y +S+IYA+A
Sbjct: 589 EDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAA 648
Query: 180 GLEKDAARIQDMRRFSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNAAK 359
G+ +D A+++ + V K+P +++IE+ +VHSF+ D SHPR+ ++YA+L++L
Sbjct: 649 GMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQM 708
Query: 360 RGAEYQHSNTIVAKDKVDYS-----CGHSEKLAIAFGLISTPQGTTIRVGKNLRVCPDCH 524
+ Y V D D C HSEKLAIA+GLISTP GT IR+ KNLRVC DCH
Sbjct: 709 KSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCH 768
Query: 525 TAAKFI 542
TA KFI
Sbjct: 769 TATKFI 774
>tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 370
Score = 149 bits (377), Expect = 7e-35
Identities = 79/171 (46%), Positives = 112/171 (65%), Gaps = 6/171 (3%)
Frame = +3
Query: 48 WTSLLGSCNAHNDVTLGERCFDRVLD-KGGCATAYTLMSSIYASAGLEKDAARIQDMRRF 224
W SLLG+C H ++ L ER +++++ Y L+S+IYA+AG DA +++ M +
Sbjct: 170 WGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKD 229
Query: 225 SRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNAAKRGAEYQHSNTIVAKD 404
V K+P ++IEV+N+VH F+VGD SHP+ +++Y L++L + A Y + V D
Sbjct: 230 RSVKKEPGCSWIEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHD 289
Query: 405 ----KVDYSCG-HSEKLAIAFGLISTPQGTTIRVGKNLRVCPDCHTAAKFI 542
+ ++ G HSEKLAIAFG+ISTP GTTIRV KNLRVC DCHTA KFI
Sbjct: 290 VEEEQKEWILGHHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFI 340
>tr|A7P2L5|A7P2L5_VITVI Chromosome chr1 scaffold_5, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00030099001
PE=4 SV=1
Length = 896
Score = 148 bits (374), Expect = 2e-34
Identities = 81/186 (43%), Positives = 116/186 (62%), Gaps = 7/186 (3%)
Frame = +3
Query: 6 DLMESIPFVLDIIG-WTSLLGSCNAHNDVTLGERCFDRVLD-KGGCATAYTLMSSIYASA 179
+L+ ++P D +G W+SLLG+C H +V LGE +L + A+ Y L+S+IY+SA
Sbjct: 681 ELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSA 740
Query: 180 GLEKDAARIQDMRRFSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNAAK 359
GL A ++ R V K+P ++IE ++VH F+ GD SHP+S+ ++ L++L+
Sbjct: 741 GLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKM 800
Query: 360 RGAEYQHSNTIVAK-----DKVDYSCGHSEKLAIAFGLISTPQGTTIRVGKNLRVCPDCH 524
R Y + V +K + CGHSEKLAIAFG+++TP GTTIRV KNLRVC DCH
Sbjct: 801 RKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCH 860
Query: 525 TAAKFI 542
A KFI
Sbjct: 861 AATKFI 866
>tr|Q5W963|Q5W963_PHYPA PPR1106-17 OS=Physcomitrella patens PE=2 SV=2
Length = 1106
Score = 145 bits (365), Expect = 2e-33
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 6/186 (3%)
Frame = +3
Query: 3 EDLMESIPFVLDIIGWTSLLGSCNAHNDVTLGERCFDRVLDKGGCATA-YTLMSSIYASA 179
E L+ +PF D W +LLG+C H ++ L E + L A Y L+S++YA+A
Sbjct: 891 ETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAA 950
Query: 180 GLEKDAARIQDMRRFSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNAAK 359
G D A+I+ + + K+P +++IEV+N +H F+ D SHP + ++YA+LK L+
Sbjct: 951 GRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEM 1010
Query: 360 RGAEY----QHSNTIVAKDKVDYS-CGHSEKLAIAFGLISTPQGTTIRVGKNLRVCPDCH 524
A Y QH + K + S C HSE+LAIA+GLI TP GT IR+ KNLR+C DCH
Sbjct: 1011 EEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCH 1070
Query: 525 TAAKFI 542
TA+KFI
Sbjct: 1071 TASKFI 1076
>tr|A9T5P5|A9T5P5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_191892 PE=4 SV=1
Length = 905
Score = 145 bits (365), Expect = 2e-33
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 6/186 (3%)
Frame = +3
Query: 3 EDLMESIPFVLDIIGWTSLLGSCNAHNDVTLGERCFDRVLDKGGCATA-YTLMSSIYASA 179
E L+ +PF D W +LLG+C H ++ L E + L A Y L+S++YA+A
Sbjct: 690 ETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAA 749
Query: 180 GLEKDAARIQDMRRFSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNAAK 359
G D A+I+ + + K+P +++IEV+N +H F+ D SHP + ++YA+LK L+
Sbjct: 750 GRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEM 809
Query: 360 RGAEY----QHSNTIVAKDKVDYS-CGHSEKLAIAFGLISTPQGTTIRVGKNLRVCPDCH 524
A Y QH + K + S C HSE+LAIA+GLI TP GT IR+ KNLR+C DCH
Sbjct: 810 EEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCH 869
Query: 525 TAAKFI 542
TA+KFI
Sbjct: 870 TASKFI 875
>tr|B3U1U3|B3U1U3_ISOEN Pentatricopeptide repeat protein (Fragment)
OS=Isoetes engelmannii GN=PPR PE=4 SV=1
Length = 155
Score = 143 bits (361), Expect = 5e-33
Identities = 71/153 (46%), Positives = 104/153 (67%), Gaps = 6/153 (3%)
Frame = +3
Query: 48 WTSLLGSCNAHNDVTLGERCFDRVLDKGGC-ATAYTLMSSIYASAGLEKDAARIQDMRRF 224
W +LL +C + V LG RCF++V+ A AY LMS IY+ +GL ++A +I ++R++
Sbjct: 1 WRTLLAACRTYGHVELGRRCFNQVVPIDPYHAGAYVLMSGIYSDSGLWEEALKIDELRQY 60
Query: 225 SRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNAAKRGAEYQHSNTIVA-- 398
+ WKKPAKA+IEV+ +VH F+VG+ SHP+ +++ LKSLN+ + A Y + ++
Sbjct: 61 ACAWKKPAKAWIEVDKKVHEFVVGEKSHPQIEEICTMLKSLNSRMKEAGYTPKHNLILQQ 120
Query: 399 ---KDKVDYSCGHSEKLAIAFGLISTPQGTTIR 488
++K D CGH EKLAIAFG+ISTP GTTIR
Sbjct: 121 MSNEEKEDVLCGHCEKLAIAFGIISTPPGTTIR 153
>tr|A7P7A8|A7P7A8_VITVI Chromosome chr9 scaffold_7, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034388001
PE=4 SV=1
Length = 487
Score = 141 bits (356), Expect = 2e-32
Identities = 75/171 (43%), Positives = 108/171 (63%), Gaps = 6/171 (3%)
Frame = +3
Query: 48 WTSLLGSCNAHNDVTLGERCFDRVLD-KGGCATAYTLMSSIYASAGLEKDAARIQDMRRF 224
W +LL SC H +V LGE +R+++ + A Y ++S+IYA AG + A+++ +
Sbjct: 287 WGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTD 346
Query: 225 SRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNAAKRGAEYQHSNTIVAKD 404
R+ K A ++IEV+N+VH+FL GD SHP SD++Y++L+ + + A Y S V D
Sbjct: 347 RRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHD 406
Query: 405 -----KVDYSCGHSEKLAIAFGLISTPQGTTIRVGKNLRVCPDCHTAAKFI 542
K + C HSE+LAIAFGLISTP GT + + KNLR+C DCH A KFI
Sbjct: 407 VEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFI 457
>tr|A7QPS9|A7QPS9_VITVI Chromosome chr10 scaffold_138, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00003060001
PE=4 SV=1
Length = 933
Score = 140 bits (352), Expect = 6e-32
Identities = 80/188 (42%), Positives = 116/188 (61%), Gaps = 9/188 (4%)
Frame = +3
Query: 6 DLMESIPFVLDIIGWTSLLGSCNAHNDVTLGERCFDRVL----DKGGCATAYTLMSSIYA 173
+L+ +PF + W +LLG+ H DV LG R + + +K G + L+++IYA
Sbjct: 719 ELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSG---THVLLANIYA 775
Query: 174 SAGLEKDAARIQDMRRFSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNA 353
SAG ++ A ++ + R S+V K+P ++IEV+++V++FLVGD SH RS ++YAKL L+
Sbjct: 776 SAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSD 835
Query: 354 AKRGAEYQHS-----NTIVAKDKVDYSCGHSEKLAIAFGLISTPQGTTIRVGKNLRVCPD 518
A Y + + +K HSEKLA+AFGLI+TPQG IRV KNLRVC D
Sbjct: 836 LMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVD 895
Query: 519 CHTAAKFI 542
CHTA K+I
Sbjct: 896 CHTAFKYI 903
>tr|A7P4F3|A7P4F3_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032129001
PE=4 SV=1
Length = 612
Score = 140 bits (352), Expect = 6e-32
Identities = 77/186 (41%), Positives = 113/186 (60%), Gaps = 6/186 (3%)
Frame = +3
Query: 3 EDLMESIPFVLDIIGWTSLLGSCNAHNDVTLGERCFDRVLD-KGGCATAYTLMSSIYASA 179
ED++ S+P ++I W +LLG C + D G+R +L+ + +Y ++++Y+S
Sbjct: 397 EDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSDHSGSYVYLANVYSSM 456
Query: 180 GLEKDAARIQDMRRFSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNAAK 359
G DAA+ + R + V K P ++IEV+N VH F +GD SHP S+ +Y+ ++ L
Sbjct: 457 GRLDDAAKCRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKIYSMIRELMWKM 516
Query: 360 RGAEYQHSNTIVA-----KDKVDYSCGHSEKLAIAFGLISTPQGTTIRVGKNLRVCPDCH 524
+ A Y+ +V ++K D HSEKLAIAFGLIST +GTTIRV KNLR+C DCH
Sbjct: 517 KLAGYKPKTDLVVHSIDEEEKEDALSIHSEKLAIAFGLISTSEGTTIRVVKNLRICNDCH 576
Query: 525 TAAKFI 542
AAK I
Sbjct: 577 DAAKII 582
>tr|A5B2K7|A5B2K7_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_023708 PE=4 SV=1
Length = 906
Score = 140 bits (352), Expect = 6e-32
Identities = 80/188 (42%), Positives = 116/188 (61%), Gaps = 9/188 (4%)
Frame = +3
Query: 6 DLMESIPFVLDIIGWTSLLGSCNAHNDVTLGERCFDRVL----DKGGCATAYTLMSSIYA 173
+L+ +PF + W +LLG+ H DV LG R + + +K G + L+++IYA
Sbjct: 692 ELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSG---THVLLANIYA 748
Query: 174 SAGLEKDAARIQDMRRFSRVWKKPAKAYIEVENQVHSFLVGDDSHPRSDDVYAKLKSLNA 353
SAG ++ A ++ + R S+V K+P ++IEV+++V++FLVGD SH RS ++YAKL L+
Sbjct: 749 SAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSD 808
Query: 354 AKRGAEYQHS-----NTIVAKDKVDYSCGHSEKLAIAFGLISTPQGTTIRVGKNLRVCPD 518
A Y + + +K HSEKLA+AFGLI+TPQG IRV KNLRVC D
Sbjct: 809 LMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVD 868
Query: 519 CHTAAKFI 542
CHTA K+I
Sbjct: 869 CHTAFKYI 876
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