BP921608 |
Clone id |
YMU001_000152_A10 |
Library |
YMU01 |
Length |
534 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000152_A10. |
Accession |
BP921608 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2203Contig1 |
Sequence |
CGGATGGGCTGTAGCACCTCCCAATTTGAGCTGGGGTGTTCGGCAGGCGCATGCGTTCTT AACATTTGCAACAGCAACTCCCTTTCAATGGGCTTCGGTTGCTGCTTTGAAGGCACCAGA GAGCTTTTATAAGGAACTCACTGAAGACTACAGTTCCAAGAAAGACATACTGGTGAAAGG ATTGAAGGAAGTAGGGTGTGAGGTGTTTGAGCCATAGGGTACCTACTTTGTTATGGCAGA TCACACTCCTTTTGGTTTTGCATCCGATGTCGAGTTTTGCAAGTTTCTTATTGAGGAGGT CGGTGTTGCTGCCATTCCTCCGAGTGTTTTCTACACAAATCCTGACGATGGTAAGAATCT TGTTCGCTTCGCATTTTGTAAAGATACGGATACTTTGAAGCAAGCGGTAGAAAGAATGAA GCTCAAGTTAAAGAAGAAGGTTGTATCTCATGCATAATGAATACATCAAAGTTACAGGCA ATTACATGTAGAAACTTCCATGATGTTAAAGAAATCACAATCCACTATTGTGTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P77806 |
Definition |
sp|P77806|YBDL_ECOLI Aminotransferase ybdL OS=Escherichia coli (strain K12) |
Align length |
140 |
Score (bit) |
105.0 |
E-value |
1.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921608|Adiantum capillus-veneris mRNA, clone: YMU001_000152_A10. (534 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P77806|YBDL_ECOLI Aminotransferase ybdL OS=Escherichia coli (... 105 1e-22 sp|Q54KM6|KAT_DICDI Kynurenine--oxoglutarate transaminase OS=Dic... 94 3e-19 sp|O14209|YDT4_SCHPO Uncharacterized aminotransferase C6B12.04c ... 80 5e-15 sp|P47039|BNA3_YEAST Probable kynurenine--oxoglutarate transamin... 73 1e-12 sp|A0LEA5|DAPAT_SYNFM LL-diaminopimelate aminotransferase OS=Syn... 71 4e-12 sp|Q3AC10|DAPAT_CARHZ LL-diaminopimelate aminotransferase OS=Car... 70 5e-12 sp|P77434|YFDZ_ECOLI Uncharacterized aminotransferase yfdZ OS=Es... 70 6e-12 sp|Q8BTY1|KAT1_MOUSE Kynurenine--oxoglutarate transaminase 1 OS=... 69 1e-11 sp|P58350|AATB1_RHIME Aspartate aminotransferase B OS=Rhizobium ... 69 1e-11 sp|Q08415|KAT1_RAT Kynurenine--oxoglutarate transaminase 1, mito... 66 9e-11 sp|Q06191|AATB2_RHIME Aspartate aminotransferase B OS=Rhizobium ... 66 9e-11 sp|Q71RI9|KAT3_MOUSE Kynurenine--oxoglutarate transaminase 3 OS=... 63 1e-09 sp|Q58FK9|KAT3_RAT Kynurenine--oxoglutarate transaminase 3 OS=Ra... 62 2e-09 sp|Q0P5G4|KAT3_BOVIN Kynurenine--oxoglutarate transaminase 3 OS=... 62 2e-09 sp|O58489|AAT_PYRHO Aspartate aminotransferase OS=Pyrococcus hor... 62 2e-09 sp|Q6YP21|KAT3_HUMAN Kynurenine--oxoglutarate transaminase 3 OS=... 62 2e-09 sp|P16524|PATA_BACSU Putative aminotransferase A OS=Bacillus sub... 61 3e-09 sp|Q16773|KAT1_HUMAN Kynurenine--oxoglutarate transaminase 1 OS=... 61 3e-09 sp|O33822|AAT_THEAQ Aspartate aminotransferase OS=Thermus aquati... 59 2e-08 sp|Q2RK33|DAPAT_MOOTA LL-diaminopimelate aminotransferase OS=Moo... 58 3e-08 sp|O87320|AATC_RHIME Putative aminotransferase aatC OS=Rhizobium... 58 3e-08 sp|Q55128|AAT_SYNY3 Aspartate aminotransferase OS=Synechocystis ... 56 9e-08 sp|Q9X0Y2|AAT_THEMA Aspartate aminotransferase OS=Thermotoga mar... 56 1e-07 sp|Q3MDN5|DAPT2_ANAVT LL-diaminopimelate aminotransferase 2 OS=A... 54 6e-07 sp|Q8YP73|DAPT2_ANASP LL-diaminopimelate aminotransferase 2 OS=A... 53 8e-07 sp|Q60317|AAT1_METJA Probable aspartate aminotransferase 1 OS=Me... 53 8e-07 sp|Q972A2|AAT_SULTO Aspartate aminotransferase OS=Sulfolobus tok... 51 4e-06 sp|Q02635|AATA_RHIME Aspartate aminotransferase A OS=Rhizobium m... 46 1e-04 sp|Q7T3E5|KAT3_DANRE Kynurenine--oxoglutarate transaminase 3 OS=... 45 3e-04 sp|Q6LX26|Y1527_METMP Uncharacterized aminotransferase MMP1527 O... 44 4e-04
>sp|P77806|YBDL_ECOLI Aminotransferase ybdL OS=Escherichia coli (strain K12) GN=ybdL PE=1 SV=1 Length = 386
Score = 105 bits (262), Expect = 1e-22 Identities = 59/140 (42%), Positives = 80/140 (57%) Frame = +2
Query: 2 GWAVAPPNLSWGVRQAHAFLTFATATPFQWASVAALKAPESFYKELTEDYSSKKDILVKG 181 G+ VAP +S +R+ H +LTF+ TP Q A L+A Y L + Y K+DILV Sbjct: 246 GYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNA 305
Query: 182 LKEVGCEVFEP*GTYFVMADHTPFGFASDVEFCKFLIEEVGVAAIPPSVFYTNPDDGKNL 361 L E E+ GTYF++ D++ DVEFC++L +E GVAAIP SVF +P K L Sbjct: 306 LNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHK-L 364
Query: 362 VRFAFCKDTDTLKQAVERMK 421 +R F K TL A ER++ Sbjct: 365 IRLCFAKKESTLLAAAERLR 384
>sp|Q54KM6|KAT_DICDI Kynurenine--oxoglutarate transaminase OS=Dictyostelium discoideum GN=ccbl PE=3 SV=1 Length = 435
Score = 94.4 bits (233), Expect = 3e-19 Identities = 56/165 (33%), Positives = 81/165 (49%), Gaps = 20/165 (12%) Frame = +2
Query: 2 GWAVAPPNLSWGVRQAHAFLTFATATPFQWASVAALKAP--ESFYKELTEDYSSKKDILV 175 GW + P N+ + H ++ F+ TP Q A AL+ P + ++KEL Y +K+D L+ Sbjct: 272 GWCIGPSNIIGAIANTHQYVPFSVPTPTQEAVAIALEQPNIKDYFKELATMYQNKRDTLL 331
Query: 176 KGLKEVGCEVFEP*GTYFVMADHTPFGFASDV----------------EFCKFLIEEVGV 307 L + G + P GTYF+M D + D ++L E GV Sbjct: 332 NSLTQAGLDPVIPQGTYFIMGDTSSIHLQGDQGKDTSITGMGLHLRDWNIARYLTTEYGV 391
Query: 308 AAIPPSVFYTNPDD--GKNLVRFAFCKDTDTLKQAVERMKLKLKK 436 IPPS FY + +N VRF FCKD TL++A + + LKLKK Sbjct: 392 TTIPPSAFYCDDHQKIPENFVRFTFCKDDLTLQKAHDNL-LKLKK 435
>sp|O14209|YDT4_SCHPO Uncharacterized aminotransferase C6B12.04c OS=Schizosaccharomyces pombe GN=SPAC6B12.04c PE=2 SV=1 Length = 421
Score = 80.5 bits (197), Expect = 5e-15 Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 17/161 (10%) Frame = +2
Query: 2 GWAVAPPNLSWGVRQAHAFLTFATATPFQWASVAALKAPE--SFYKELTEDYSSKKDILV 175 GW + +L AH + FA +P Q A A E ++Y+E Y + +IL Sbjct: 259 GWLIGDESLIKYSAAAHTRICFAVNSPCQEALAIAFGEAEKHNYYEEYKSSYKKRFEILA 318
Query: 176 KGLKEVGCEVFEP*GTYFVMADHTPFGFASDVEF-------------CKFLIEEVGVAAI 316 K ++ P G+Y+ MA+ + D F C ++++E+GVA I Sbjct: 319 KAFDQLEIPYTIPDGSYYTMANFSKLKLPKDYPFPEEIANRPRDFKLCYWILKEIGVATI 378
Query: 317 PPSVFYTNPDD--GKNLVRFAFCKDTDTLKQAVERMKLKLK 433 PP+ FYT+ D +N +RFAFCK +TL++A R++ KLK Sbjct: 379 PPTEFYTDEDAPVAENYLRFAFCKTFETLEEAARRLQ-KLK 418
>sp|P47039|BNA3_YEAST Probable kynurenine--oxoglutarate transaminase BNA3 OS=Saccharomyces cerevisiae GN=BNA3 PE=1 SV=1 Length = 444
Score = 72.8 bits (177), Expect = 1e-12 Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 17/144 (11%) Frame = +2
Query: 44 QAHAFLTFATATPFQWASVAALK--APESFYKELTEDYSSKKDILVKGLKEVGCEVFEP* 217 +AH + FA+ +P Q A ++ +++++ ++Y +K I E+G P Sbjct: 296 KAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPE 355
Query: 218 GTYFVMADHTPFGFASDVEFCK-------------FLIEEVGVAAIPPSVFYTNPDD--G 352 GTYFV+ D + D + + +LI E+GV AIPP+ FY + Sbjct: 356 GTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAA 415
Query: 353 KNLVRFAFCKDTDTLKQAVERMKL 424 +NL+RFA CKD L+ AVER+KL Sbjct: 416 ENLLRFAVCKDDAYLENAVERLKL 439
>sp|A0LEA5|DAPAT_SYNFM LL-diaminopimelate aminotransferase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=dapL PE=1 SV=1 Length = 388
Score = 70.9 bits (172), Expect = 4e-12 Identities = 43/140 (30%), Positives = 71/140 (50%) Frame = +2
Query: 2 GWAVAPPNLSWGVRQAHAFLTFATATPFQWASVAALKAPESFYKELTEDYSSKKDILVKG 181 G+AV ++ G+ Q + + QWA + AL+ + E+ Y + DIL++G Sbjct: 250 GFAVGNADILAGLGQVKSNIDSGAFNAVQWAGITALEGDQGCVVEMQRIYKERLDILIEG 309
Query: 182 LKEVGCEVFEP*GTYFVMADHTPFGFASDVEFCKFLIEEVGVAAIPPSVFYTNPDDGKNL 361 LK +G P T++V TP G++S +F L+ E G+ A P S F G+ Sbjct: 310 LKRIGLHPEVPRATFYVWCP-TPPGYSSK-DFSSLLLREAGIVATPGSGFGA---PGEGY 364
Query: 362 VRFAFCKDTDTLKQAVERMK 421 +R A D + +++AVERM+ Sbjct: 365 IRMALTVDKERVREAVERMR 384
>sp|Q3AC10|DAPAT_CARHZ LL-diaminopimelate aminotransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dapL PE=3 SV=1 Length = 390
Score = 70.5 bits (171), Expect = 5e-12 Identities = 42/145 (28%), Positives = 77/145 (53%) Frame = +2
Query: 2 GWAVAPPNLSWGVRQAHAFLTFATATPFQWASVAALKAPESFYKELTEDYSSKKDILVKG 181 GWAV + + + + Q+A + AL+ P+ KEL + Y+ ++D++++ Sbjct: 248 GWAVGNAKAIDALGRLKSNIDSGVFQAIQYAGIKALEGPQDVVKELCDLYAQRRDLVIET 307
Query: 182 LKEVGCEVFEP*GTYFVMADHTPFGFASDVEFCKFLIEEVGVAAIPPSVFYTNPDDGKNL 361 L ++G + +P GT+++ A P GF S F ++LIE+ GV P + + TN G+ Sbjct: 308 LNKLGWNLSKPKGTFYIWAP-VPKGFTS-ASFAEYLIEKAGVVITPGNGYGTN---GEGY 362
Query: 362 VRFAFCKDTDTLKQAVERMKLKLKK 436 R + T LK+A++R++ L K Sbjct: 363 FRISLTIPTSRLKEALQRIEQHLGK 387
>sp|P77434|YFDZ_ECOLI Uncharacterized aminotransferase yfdZ OS=Escherichia coli (strain K12) GN=yfdZ PE=2 SV=1 Length = 412
Score = 70.1 bits (170), Expect = 6e-12 Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 1/141 (0%) Frame = +2
Query: 2 GWAVAPPNLSWGVRQAHAFLTFATATPFQWASVAALKAPESFYKELTEDYSSKKDILVKG 181 G+ V L + + ++ + T TP Q A++AAL+ + +++ E Y ++D+LVKG Sbjct: 254 GFMVGNKTLVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKG 313
Query: 182 LKEVGCEVFEP*GTYFVMAD-HTPFGFASDVEFCKFLIEEVGVAAIPPSVFYTNPDDGKN 358 L E G V P + +V A P+ +EF K L+ E V P F D G Sbjct: 314 LHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGF---GDYGDT 370
Query: 359 LVRFAFCKDTDTLKQAVERMK 421 VRFA ++ D ++QA+ +K Sbjct: 371 HVRFALIENRDRIRQAIRGIK 391
>sp|Q8BTY1|KAT1_MOUSE Kynurenine--oxoglutarate transaminase 1 OS=Mus musculus GN=Ccbl1 PE=2 SV=1 Length = 424
Score = 69.3 bits (168), Expect = 1e-11 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 20/159 (12%) Frame = +2
Query: 2 GWAVAPPNLSWGVRQAHAFLTFATATPFQWASVAALKA-------PESFYKELTEDYSSK 160 GW + P N+ +R H F T Q A + P S++ +L + Sbjct: 257 GWVMGPDNIMKHLRTVHQNSIFHCPTQAQAAVAQCFEREQQHFGQPSSYFLQLPQAMGLN 316
Query: 161 KDILVKGLKEVGCEVFEP*GTYFVMADHTPFGFAS-----------DVEFCKFLIEEVGV 307 +D +++ L+ VG + P G+YF++AD + F + D F K++I+ G+ Sbjct: 317 RDHMIQSLQSVGLKPLIPQGSYFLIADISDFKSSMPDLPGAMDEPYDTRFAKWMIKNKGL 376
Query: 308 AAIPPSVFYTNP--DDGKNLVRFAFCKDTDTLKQAVERM 418 +AIP S FY+ P D + +RF F KD TL+ +R+ Sbjct: 377 SAIPVSTFYSQPHHKDFDHYIRFCFVKDKATLQAMDKRL 415
>sp|P58350|AATB1_RHIME Aspartate aminotransferase B OS=Rhizobium meliloti GN=aatB PE=3 SV=1 Length = 410
Score = 68.9 bits (167), Expect = 1e-11 Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 10/149 (6%) Frame = +2
Query: 2 GWAVAPPNLSWGVRQAHAFLTFATATPFQWASVAALKAPESFYKELTEDYSSKKDILVKG 181 G+A P L + + T ++ Q ASVAAL P+ F KE TE + ++D++V G Sbjct: 259 GYAGGPRELIKAMAVVQSQATSCPSSISQAASVAALNGPQDFLKERTESFQRRRDLVVNG 318
Query: 182 LKEV-GCEVFEP*GTYF-------VMADHTPFG--FASDVEFCKFLIEEVGVAAIPPSVF 331 L + G + P G ++ V+ TP G +D +FC +L+E+ VA +P S F Sbjct: 319 LNAIDGLDCRVPEGAFYTFSGCAGVLGKVTPSGKRIKTDTDFCAYLLEDAHVAVVPGSAF 378
Query: 332 YTNPDDGKNLVRFAFCKDTDTLKQAVERM 418 +P R ++ LK+A+ER+ Sbjct: 379 GLSP-----FFRISYATSEAELKEALERI 402
>sp|Q08415|KAT1_RAT Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus GN=Ccbl1 PE=2 SV=1 Length = 457
Score = 66.2 bits (160), Expect = 9e-11 Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%) Frame = +2
Query: 2 GWAVAPPNLSWGVRQAHAFLTFATATPFQWASVAALKA-------PESFYKELTEDYSSK 160 GW + P N+ +R H F T Q A + P S++ +L + Sbjct: 291 GWVMGPDNIMKHLRTVHQNSIFHCPTQAQAAVAQCFEREQQHFGQPSSYFLQLPQAMELN 350
Query: 161 KDILVKGLKEVGCEVFEP*GTYFVMADHTPFGFAS-----------DVEFCKFLIEEVGV 307 +D +++ L+ VG +++ G+YF++AD + F D F K++I+ +G+ Sbjct: 351 RDHMIRSLQSVGLKLWISQGSYFLIADISDFKSKMPDLPGAEDEPYDRRFAKWMIKNMGL 410
Query: 308 AAIPPSVFYTNPD--DGKNLVRFAFCKDTDTLKQAVERMK 421 IP S F++ P D + +RF F KD TL+ ER++ Sbjct: 411 VGIPVSTFFSRPHQKDFDHYIRFCFVKDKATLQAMDERLR 450
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SBL0 |
Definition |
tr|A9SBL0|A9SBL0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
149 |
Score (bit) |
240.0 |
E-value |
3.0e-62 |
Report |
|