BP921613 |
Clone id |
YMU001_000152_B04 |
Library |
YMU01 |
Length |
547 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000152_B04. |
Accession |
BP921613 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CAGTTTGTGCCGGGCTCATGGCATTAAATGTGTTGCTGCTGAGGAGTCTGTCGATTTGCT GATGCATGGGTTTTGCTTTCGGTTAAGACTTCATTATGATAGAGACCCAACTTTAGTACA CCCAACGACTGAGAATATTCCGGTGGCAAAGGCTTTGGCCAGTCTGCCTGATAAAGCTTC ATCTCGTCTGCTGCTAGACAAGAATTTGTCACTTCGAAGTTTGCATTCGAGTATGTTAGG TGGCTTGCAAGGGAGGTACCCTGCTTATGGACCAACAGTGAGACTGGCGAAGAGATGGAT AGGGTCACATCTGTTCTCTGATGTTTTGAGAGAAGAGGCAGTAGAGCTTTTGGTTGCTTT TTTATTTGTAAAACCTGCTCCATATTCGCCACCCTCGTCACGAATAATAGGATTTCTCAG GTTCCTCCTTTTGCTAAGGAATTATGACTGGGCTTTCTCACCCCTGGTTGTGGATATAAA TGGAGATTCACCGGAAAAGAGTATACTTTTATCATGGATGAGTTTGGCCAGACAAGGAAG ACAGGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6NRY2 |
Definition |
sp|Q6NRY2|NOL6_XENLA Nucleolar protein 6 OS=Xenopus laevis |
Align length |
169 |
Score (bit) |
99.0 |
E-value |
1.0e-20 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S747 |
Definition |
tr|A9S747|A9S747_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
155 |
Score (bit) |
145.0 |
E-value |
1.0e-33 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921613|Adiantum capillus-veneris mRNA, clone: YMU001_000152_B04. (532 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S747|A9S747_PHYPA Predicted protein OS=Physcomitrella paten... 145 1e-33 tr|A7PUU3|A7PUU3_VITVI Chromosome chr4 scaffold_32, whole genome... 136 6e-31 tr|A5C2I5|A5C2I5_VITVI Putative uncharacterized protein OS=Vitis... 134 3e-30 tr|Q0WVM5|Q0WVM5_ARATH Putative uncharacterized protein At1g6381... 133 7e-30 tr|Q9CAJ5|Q9CAJ5_ARATH Putative uncharacterized protein T12P18.1... 132 9e-30 tr|Q2QX79|Q2QX79_ORYSJ Nrap protein, expressed OS=Oryza sativa s... 123 5e-27 tr|Q2QX78|Q2QX78_ORYSJ Nrap protein, expressed OS=Oryza sativa s... 123 5e-27 tr|B8BNC8|B8BNC8_ORYSI Putative uncharacterized protein OS=Oryza... 123 5e-27 tr|Q3U5C6|Q3U5C6_MOUSE Putative uncharacterized protein (Fragmen... 97 5e-19 tr|A5PJU0|A5PJU0_BOVIN NOL6 protein OS=Bos taurus GN=NOL6 PE=2 SV=1 96 2e-18 tr|B4DF80|B4DF80_HUMAN cDNA FLJ58527, highly similar to Nucleola... 95 2e-18 tr|B3KPN5|B3KPN5_HUMAN cDNA FLJ31997 fis, clone NT2RP7009259, hi... 95 2e-18 tr|Q0IPU9|Q0IPU9_ORYSJ Os12g0166500 protein OS=Oryza sativa subs... 90 8e-17 tr|B3STT7|B3STT7_RAT Neuroprotective protein 1 OS=Rattus norvegi... 89 2e-16 tr|A6R1N1|A6R1N1_AJECN Predicted protein OS=Ajellomyces capsulat... 84 6e-15 tr|B3SA13|B3SA13_TRIAD Putative uncharacterized protein (Fragmen... 80 5e-14 tr|Q2U597|Q2U597_ASPOR Nucleolar RNA-associated protein OS=Asper... 80 9e-14 tr|B8NV94|B8NV94_ASPFL Pre-rRNA processing protein Utp22 OS=Aspe... 80 9e-14 tr|Q014L6|Q014L6_OSTTA Nucleolar RNA-associated family protein /... 79 2e-13 tr|Q0CBE8|Q0CBE8_ASPTN Putative uncharacterized protein OS=Asper... 79 2e-13 tr|B6HEW6|B6HEW6_PENCH Pc20g08360 protein OS=Penicillium chrysog... 78 2e-13 tr|A1CJ23|A1CJ23_ASPCL Pre-rRNA processing protein Utp22 OS=Aspe... 78 3e-13 tr|Q5B7M5|Q5B7M5_EMENI Putative uncharacterized protein OS=Emeri... 77 4e-13 tr|A4S0N1|A4S0N1_OSTLU Predicted protein OS=Ostreococcus lucimar... 77 6e-13 tr|A7S7H5|A7S7H5_NEMVE Predicted protein OS=Nematostella vectens... 77 6e-13 tr|Q0TXJ2|Q0TXJ2_PHANO Putative uncharacterized protein OS=Phaeo... 77 7e-13 tr|B6M2S0|B6M2S0_BRAFL Putative uncharacterized protein OS=Branc... 76 9e-13 tr|B2VXG7|B2VXG7_PYRTR Pre-rRNA processing protein Utp22 OS=Pyre... 75 2e-12 tr|B6M2R0|B6M2R0_BRAFL Putative uncharacterized protein OS=Branc... 75 3e-12 tr|A7F082|A7F082_SCLS1 Putative uncharacterized protein OS=Scler... 75 3e-12
>tr|A9S747|A9S747_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163204 PE=4 SV=1 Length = 1111
Score = 145 bits (367), Expect = 1e-33 Identities = 70/155 (45%), Positives = 96/155 (61%) Frame = +2
Query: 8 IKCVAAEESVDLLMHGFCFRLRLHYDRDPTLVHPTTENIPVAKALASLPDKAXXXXXXXX 187 + CVAAE+++D+++ G+ FRL L YD+DPT +A+ S D+ Sbjct: 724 VGCVAAEDAIDIIVEGYVFRLLLMYDKDPT------------RAMTSKDDEQLGTVSPAH 771
Query: 188 XXXXXXXHSSMLGGLQGRYPAYGPTVRLAKRWIGSHLFSDVLREEAVELLVAFLFVKPAP 367 H+S++ GL G YPA+GPTVRLAKRW SH FS L EE +ELLVA++FV+P+P Sbjct: 772 DLLLQSSHASLIQGLHGVYPAFGPTVRLAKRWTWSHFFSGALSEEVIELLVAYVFVRPSP 831
Query: 368 YSPPSSRIIGXXXXXXXXXNYDWAFSPLVVDINGD 472 Y PP+SR+ G N++WA PLVVD+NGD Sbjct: 832 YLPPASRVTGFLRFLQLLVNHEWALEPLVVDVNGD 866
>tr|A7PUU3|A7PUU3_VITVI Chromosome chr4 scaffold_32, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024923001 PE=4 SV=1 Length = 1083
Score = 136 bits (343), Expect = 6e-31 Identities = 82/179 (45%), Positives = 108/179 (60%), Gaps = 3/179 (1%) Frame = +2
Query: 5 GIKCVAAEESVDLLMHGFCFRLRLHYDRDPTLVHPTTENIPVAKALASLPDKAXXXXXXX 184 G+ C A EE+VD+ M G+ FRLR+ ++R +L++ + + K ++S+ + Sbjct: 702 GMICTATEENVDVFMSGYAFRLRILHERGLSLLNRQNGSNQL-KHISSVDKELFTRGQ-- 758
Query: 185 XXXXXXXXHSSMLGGLQGRYPAYGPTVRLAKRWIGSHLFSDVLREEAVELLVAFLFVKPA 364 HSSM+ GLQG YP YGP VRLAKRW+ SHLFS L EEAVELLVA+LF+KP Sbjct: 759 --------HSSMINGLQGCYPIYGPVVRLAKRWVASHLFSACLVEEAVELLVAYLFLKPL 810
Query: 365 PYSPPSSRIIGXXXXXXXXXNYDWAFSPLVVDINGD---SPEKSILLSWMSLARQGRQE 532 P+ P SRI G YDW FS LVVDIN D S EK I ++ S +R+G +E Sbjct: 811 PFYVPCSRISGFLRFLRLLSEYDWNFSALVVDINSDLSPSDEKEINENFTS-SRKGYEE 868
>tr|A5C2I5|A5C2I5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009031 PE=4 SV=1 Length = 1040
Score = 134 bits (337), Expect = 3e-30 Identities = 81/179 (45%), Positives = 107/179 (59%), Gaps = 3/179 (1%) Frame = +2
Query: 5 GIKCVAAEESVDLLMHGFCFRLRLHYDRDPTLVHPTTENIPVAKALASLPDKAXXXXXXX 184 G+ C A EE+VD+ M G+ FRLR+ ++R +L++ + + K ++S+ + Sbjct: 673 GMICTATEENVDVFMSGYAFRLRILHERGLSLLNRQNGSNQL-KHISSVDKELFTRGQ-- 729
Query: 185 XXXXXXXXHSSMLGGLQGRYPAYGPTVRLAKRWIGSHLFSDVLREEAVELLVAFLFVKPA 364 HSSM+ GLQG YP YGP VRLAKRW+ SHLFS L EEAVELLVA+LF+KP Sbjct: 730 --------HSSMINGLQGCYPIYGPVVRLAKRWVASHLFSACLVEEAVELLVAYLFLKPL 781
Query: 365 PYSPPSSRIIGXXXXXXXXXNYDWAFSPLVVDINGD---SPEKSILLSWMSLARQGRQE 532 P+ P S I G YDW FS LVVDIN D S EK I ++ S +R+G +E Sbjct: 782 PFYVPCSXISGFLRFLRLLSEYDWNFSALVVDINSDLSPSDEKEINENFTS-SRKGYEE 839
>tr|Q0WVM5|Q0WVM5_ARATH Putative uncharacterized protein At1g63810 OS=Arabidopsis thaliana GN=At1g63810 PE=2 SV=1 Length = 1053
Score = 133 bits (334), Expect = 7e-30 Identities = 78/179 (43%), Positives = 104/179 (58%), Gaps = 3/179 (1%) Frame = +2
Query: 5 GIKCVAAEESVDLLMHGFCFRLRLHYDRDPTLVHPTTENIPVAKALASLPDKAXXXXXXX 184 GI C A E++VD+ + G+ FRLR+ ++R +LV PV S DK Sbjct: 672 GIPCTATEDNVDVFIGGYAFRLRILHERGLSLVKREIGVDPVKHV--SSTDKMLFIRSQ- 728
Query: 185 XXXXXXXXHSSMLGGLQGRYPAYGPTVRLAKRWIGSHLFSDVLREEAVELLVAFLFVKPA 364 H+SM+ GLQGR+P Y P RLAKRW+ +HLFS L EEA+ELLVA+LF+ P Sbjct: 729 --------HASMINGLQGRFPVYAPVARLAKRWVSAHLFSGCLAEEAIELLVAYLFLTPL 780
Query: 365 PYSPPSSRIIGXXXXXXXXXNYDWAFSPLVVDINGD---SPEKSILLSWMSLARQGRQE 532 P PSSRI G +Y+W F PL+VDIN D + EK I ++MS +R+G +E Sbjct: 781 PLGVPSSRINGFLRFLRLLADYEWMFYPLIVDINNDFGRNDEKEINDNFMS-SRKGYEE 838
>tr|Q9CAJ5|Q9CAJ5_ARATH Putative uncharacterized protein T12P18.17 OS=Arabidopsis thaliana GN=T12P18.17 PE=4 SV=1 Length = 1026
Score = 132 bits (333), Expect = 9e-30 Identities = 78/183 (42%), Positives = 108/183 (59%), Gaps = 7/183 (3%) Frame = +2
Query: 5 GIKCVAAEESVDLLMHGFCFRLRLHYDRDPTLVHPTTE----NIPVAKALASLPDKAXXX 172 GI C A E++VD+ + G+ FRLR+ ++R +LV +E + K ++S DK Sbjct: 654 GIPCTATEDNVDVFIGGYAFRLRILHERGLSLVKRESEFSSFGVDPVKHVSST-DKMLFI 712
Query: 173 XXXXXXXXXXXXHSSMLGGLQGRYPAYGPTVRLAKRWIGSHLFSDVLREEAVELLVAFLF 352 H+SM+ GLQGR+P Y P RLAKRW+ +HLFS L EEA+ELLVA+LF Sbjct: 713 RSQ---------HASMINGLQGRFPVYAPVARLAKRWVSAHLFSGCLAEEAIELLVAYLF 763
Query: 353 VKPAPYSPPSSRIIGXXXXXXXXXNYDWAFSPLVVDINGD---SPEKSILLSWMSLARQG 523 + P P PSSRI G +Y+W F PL+VDIN D + EK I ++MS +R+G Sbjct: 764 LTPLPLGVPSSRINGFLRFLRLLADYEWMFYPLIVDINNDFGRNDEKEINDNFMS-SRKG 822
Query: 524 RQE 532 +E Sbjct: 823 YEE 825
>tr|Q2QX79|Q2QX79_ORYSJ Nrap protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g06910 PE=4 SV=2 Length = 892
Score = 123 bits (309), Expect = 5e-27 Identities = 64/156 (41%), Positives = 88/156 (56%) Frame = +2
Query: 5 GIKCVAAEESVDLLMHGFCFRLRLHYDRDPTLVHPTTENIPVAKALASLPDKAXXXXXXX 184 G+ A+E+ V++L G+ F L++ ++R L + KA Sbjct: 658 GMFVTASEDEVNVLTSGYSFLLKIFHERGLLLQKRDGDG------------KAQNVPSED 705
Query: 185 XXXXXXXXHSSMLGGLQGRYPAYGPTVRLAKRWIGSHLFSDVLREEAVELLVAFLFVKPA 364 HSSM+ GL GRY YGP VRLAKRWI +HLFS + EEAVELLVA+LF+KP Sbjct: 706 KELFLRSQHSSMINGLHGRYQVYGPVVRLAKRWISAHLFSSFISEEAVELLVAYLFLKPY 765
Query: 365 PYSPPSSRIIGXXXXXXXXXNYDWAFSPLVVDINGD 472 P++ PSSR+ G ++DW FSP+++DIN D Sbjct: 766 PFNVPSSRVAGFLRFLRLLSSFDWTFSPMIIDINND 801
>tr|Q2QX78|Q2QX78_ORYSJ Nrap protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g06910 PE=4 SV=2 Length = 1036
Score = 123 bits (309), Expect = 5e-27 Identities = 64/156 (41%), Positives = 88/156 (56%) Frame = +2
Query: 5 GIKCVAAEESVDLLMHGFCFRLRLHYDRDPTLVHPTTENIPVAKALASLPDKAXXXXXXX 184 G+ A+E+ V++L G+ F L++ ++R L + KA Sbjct: 658 GMFVTASEDEVNVLTSGYSFLLKIFHERGLLLQKRDGDG------------KAQNVPSED 705
Query: 185 XXXXXXXXHSSMLGGLQGRYPAYGPTVRLAKRWIGSHLFSDVLREEAVELLVAFLFVKPA 364 HSSM+ GL GRY YGP VRLAKRWI +HLFS + EEAVELLVA+LF+KP Sbjct: 706 KELFLRSQHSSMINGLHGRYQVYGPVVRLAKRWISAHLFSSFISEEAVELLVAYLFLKPY 765
Query: 365 PYSPPSSRIIGXXXXXXXXXNYDWAFSPLVVDINGD 472 P++ PSSR+ G ++DW FSP+++DIN D Sbjct: 766 PFNVPSSRVAGFLRFLRLLSSFDWTFSPMIIDINND 801
>tr|B8BNC8|B8BNC8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37603 PE=4 SV=1 Length = 1021
Score = 123 bits (309), Expect = 5e-27 Identities = 64/156 (41%), Positives = 88/156 (56%) Frame = +2
Query: 5 GIKCVAAEESVDLLMHGFCFRLRLHYDRDPTLVHPTTENIPVAKALASLPDKAXXXXXXX 184 G+ A+E+ V++L G+ F L++ ++R L + KA Sbjct: 643 GMFVTASEDEVNVLTSGYSFLLKIFHERGLLLQKRDGDG------------KAQNVPSED 690
Query: 185 XXXXXXXXHSSMLGGLQGRYPAYGPTVRLAKRWIGSHLFSDVLREEAVELLVAFLFVKPA 364 HSSM+ GL GRY YGP VRLAKRWI +HLFS + EEAVELLVA+LF+KP Sbjct: 691 KELFLRSQHSSMINGLHGRYQVYGPVVRLAKRWISAHLFSSFISEEAVELLVAYLFLKPY 750
Query: 365 PYSPPSSRIIGXXXXXXXXXNYDWAFSPLVVDINGD 472 P++ PSSR+ G ++DW FSP+++DIN D Sbjct: 751 PFNVPSSRVAGFLRFLRLLSSFDWTFSPMIIDINND 786
>tr|Q3U5C6|Q3U5C6_MOUSE Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Nol6 PE=2 SV=1 Length = 740
Score = 97.1 bits (240), Expect = 5e-19 Identities = 51/157 (32%), Positives = 82/157 (52%) Frame = +2
Query: 2 HGIKCVAAEESVDLLMHGFCFRLRLHYDRDPTLVHPTTENIPVAKALASLPDKAXXXXXX 181 H ++C A D+L GF FR+R+ Y R+P ++ + + + + SL D Sbjct: 367 HRLQCCATATHTDVLKDGFVFRIRVAYQREPQIL----KEVRSPEGMVSLRDTPASLRLE 422
Query: 182 XXXXXXXXXHSSMLGGLQGRYPAYGPTVRLAKRWIGSHLFSDVLREEAVELLVAFLFVKP 361 +S L GLQ +YPAY RLAKRW+ + L + +E+++LL A LF+ P Sbjct: 423 RDTKLLPLL-TSALHGLQQQYPAYSGVARLAKRWVRAQLLGEGFTDESLDLLAASLFLHP 481
Query: 362 APYSPPSSRIIGXXXXXXXXXNYDWAFSPLVVDINGD 472 P++PPS +G +DW +PL+V++NG+ Sbjct: 482 EPFTPPSVPQVGFLRFLYLVSTFDWKNNPLIVNLNGE 518
>tr|A5PJU0|A5PJU0_BOVIN NOL6 protein OS=Bos taurus GN=NOL6 PE=2 SV=1 Length = 1146
Score = 95.5 bits (236), Expect = 2e-18 Identities = 52/157 (33%), Positives = 80/157 (50%) Frame = +2
Query: 2 HGIKCVAAEESVDLLMHGFCFRLRLHYDRDPTLVHPTTENIPVAKALASLPDKAXXXXXX 181 HG+ C A D+L GF FR+R+ Y R+P ++ T + SL D Sbjct: 773 HGLPCRATATHTDVLKDGFVFRIRVAYQREPQILKETRS----PAGMISLRDTPASLRLE 828
Query: 182 XXXXXXXXXHSSMLGGLQGRYPAYGPTVRLAKRWIGSHLFSDVLREEAVELLVAFLFVKP 361 +S L GLQ ++PA+ RLAKRW+ + L L +E+++L+ A LF+ P Sbjct: 829 RDTRQLPLL-TSALHGLQQQHPAFSGVARLAKRWVRAQLLGGELTDESLDLVAAALFLHP 887
Query: 362 APYSPPSSRIIGXXXXXXXXXNYDWAFSPLVVDINGD 472 P+SPPSS +G +DW +PL+V++N + Sbjct: 888 EPFSPPSSPQVGFLRFLFLISTFDWKNNPLIVNLNNE 924
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