BP921621
Clone id YMU001_000152_C01
Library
Length 545
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000152_C01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTGAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAG
GCGCAGCAGTTGACTAGACCATCTAGGGGTAAAGCACCGTTCCGGTGCGGGCTGCGAGAG
CGGTACCAAATCGAGGCAAACTCTGAATACTAGATGTAACGTGCAAGTAAAAGGAACGAA
GGAAAAGGGTCAACCAGTGAGACGATGAGGGATAAGCTTCACCGTCGAGAGGGGAACAGC
CCAGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGGTAAAGGAGGTAGGAGTGCAA
AGACAGGCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACT
GATCAAGCGCTCTTGCGCCGAAGATGAGCGGGACTAAGCGGTCTGCCGAAGCTGTGGGAT
GTCAAAAAACATCGGTAGGGGAGCGTTCCGCCCCAGATGGAAGCACCAGTGCGAGCAGGT
GTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGAAAACATTGGTGAGAATCCAA
TGCCC
■■Homology search results ■■ -
sp_hit_id Q8N819
Definition sp|Q8N819|PPMBL_HUMAN Probable protein phosphatase 1B-like OS=Homo sapiens
Align length 57
Score (bit) 32.3
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921621|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_C01.
(524 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8N819|PPMBL_HUMAN Probable protein phosphatase 1B-like OS=Ho... 32 1.4
sp|Q3UG20|MLL5_MOUSE Histone-lysine N-methyltransferase MLL5 OS=... 32 1.8
sp|Q80WV7|SRR2L_MOUSE SRRM2-like protein OS=Mus musculus GN=MNCb... 32 2.4
sp|Q566X8|DMX1B_DANRE Diencephalon/mesencephalon homeobox protei... 30 5.3
sp|P28329|CLAT_HUMAN Choline O-acetyltransferase OS=Homo sapiens... 30 7.0
sp|Q2U968|SEC16_ASPOR COPII coat assembly protein sec16 OS=Asper... 30 9.1

>sp|Q8N819|PPMBL_HUMAN Probable protein phosphatase 1B-like OS=Homo
sapiens PE=2 SV=2
Length = 430

Score = 32.3 bits (72), Expect = 1.4
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = +3

Query: 147 ILDVTCK*KERRKRVNQ*DDEG*ASPSRGEQPRSPAKAPK*PLSGKGGRSAKTGRRF 317
+L CK KER K + ++E A E PRS AP+ GG A G RF
Sbjct: 11 LLWTACKKKEREKEGREEEEEEEAGRRAPEGPRSLLTAPRRAQRPHGGAEASGGLRF 67


>sp|Q3UG20|MLL5_MOUSE Histone-lysine N-methyltransferase MLL5 OS=Mus
musculus GN=Mll5 PE=2 SV=2
Length = 1868

Score = 32.0 bits (71), Expect = 1.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3

Query: 363 SSALAPKMSGTKRSAEAVGCQKTSVGERSAPDGSTSASRCGRSGS 497
+ +LAP +S +A G + TS E +PD S S S+ + GS
Sbjct: 1320 AQSLAPSLSELMADPDAEGTEATSTSECPSPDTSQSPSKTSKPGS 1364


>sp|Q80WV7|SRR2L_MOUSE SRRM2-like protein OS=Mus musculus
GN=MNCb-4760 PE=2 SV=1
Length = 648

Score = 31.6 bits (70), Expect = 2.4
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +3

Query: 222 PSRGEQPRSPAKAPK*PLSGKGGRSA-KTGRRFA*KQPPLKECVIAH*SSALAPKMSGTK 398
P+RG+ +SP AP G+GGR+A T RR ++ + SSA AP+ G +
Sbjct: 354 PARGKDSQSPRSAPS--SQGRGGRAAGGTARRRRRRRRRRRSR-----SSANAPRRRGRR 406

Query: 399 RSAEAV--GCQKTSVGERSAPDGSTSA 473
R+ A G ++ G S+ D A
Sbjct: 407 RTKPAPPRGSSRSLSGAHSSSDSGGGA 433


>sp|Q566X8|DMX1B_DANRE Diencephalon/mesencephalon homeobox protein
1-B OS=Danio rerio GN=dmbx1b PE=2 SV=1
Length = 369

Score = 30.4 bits (67), Expect = 5.3
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +3

Query: 171 KERRKRVNQ*DDEG*ASPSRGEQPRSPAKAPK*PLSGKGGRSAKTGRRFA*KQPPLKECV 350
KE+ +R+ + EG + E P A+AP PL G+G SA + C
Sbjct: 130 KEQLQRLKEAGTEGAQDEGKEEAPPVEAQAPPSPLDGRGLTSAPS-------------CE 176

Query: 351 IAH*SSALAPKMSGTKRSAE 410
+ + +P+ SG + AE
Sbjct: 177 LNEEVNVTSPEQSGAESGAE 196


>sp|P28329|CLAT_HUMAN Choline O-acetyltransferase OS=Homo sapiens
GN=CHAT PE=1 SV=3
Length = 748

Score = 30.0 bits (66), Expect = 7.0
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -1

Query: 473 RTGASIWGGTLPYRCFLTSHSFGRPLSPAHLRRKSA*SVSYYALFQGWLLLG 318
R AS+ G L Y+ L SHS + L + YY LF + L G
Sbjct: 233 RFAASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPG 284


>sp|Q2U968|SEC16_ASPOR COPII coat assembly protein sec16
OS=Aspergillus oryzae GN=sec16 PE=3 SV=1
Length = 1843

Score = 29.6 bits (65), Expect = 9.1
Identities = 35/116 (30%), Positives = 42/116 (36%), Gaps = 7/116 (6%)
Frame = +3

Query: 171 KERRKRVNQ*DDEG*ASPSRGEQPRSPAKAPK*PLSGKGGRSAKTGRRFA*KQPPLKECV 350
KE +K VN+ D AS SRG P A AP SG A + +PP
Sbjct: 1699 KELKKWVNKKDPNS-ASVSRGTPPPPKASAPSRSASGSTAPPAASMGLGLDSRPPSSAGA 1757

Query: 351 IAH*SSALAPK-------MSGTKRSAEAVGCQKTSVGERSAPDGSTSASRCGRSGS 497
SS+ AP M GT RSA T S P A+ + S
Sbjct: 1758 PPSLSSSPAPPSLAAPPPMLGTARSASTSAAMPTPPIGSSLPPPPRPATSLSNASS 1813


tr_hit_id A6N1H4
Definition tr|A6N1H4|A6N1H4_ORYSI Retrotransposon protein OS=Oryza sativa subsp. indica
Align length 114
Score (bit) 135.0
E-value 2.0e-30
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921621|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_C01.
(524 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6N1H4|A6N1H4_ORYSI Retrotransposon protein OS=Oryza sativa s... 135 2e-30
tr|B7FGU0|B7FGU0_MEDTR Putative uncharacterized protein OS=Medic... 124 2e-27
tr|Q5M9Z9|Q5M9Z9_TOBAC Putative uncharacterized protein orf106b ... 62 5e-18
tr|Q85WT3|Q85WT3_PINKO ORF46f OS=Pinus koraiensis PE=4 SV=1 87 4e-16
tr|A9PE47|A9PE47_POPTR Putative uncharacterized protein OS=Popul... 51 1e-13
tr|Q9RXQ4|Q9RXQ4_DEIRA Putative uncharacterized protein OS=Deino... 72 2e-11
tr|Q9RS75|Q9RS75_DEIRA Putative uncharacterized protein OS=Deino... 72 2e-11
tr|A7QCF1|A7QCF1_VITVI Chromosome undetermined scaffold_77, whol... 47 9e-11
tr|B3D9S7|B3D9S7_BURM1 Putative uncharacterized protein OS=Burkh... 61 3e-08
tr|A1IW39|A1IW39_9LAMI Putative uncharacterized protein ophh-69 ... 59 1e-07
tr|Q0JIM3|Q0JIM3_ORYSJ Photosystem I P700 chlorophyll A apoprote... 55 2e-06
tr|A7QY24|A7QY24_VITVI Chromosome undetermined scaffold_237, who... 38 1e-04
tr|A7PNG2|A7PNG2_VITVI Chromosome chr1 scaffold_22, whole genome... 44 0.005
tr|A1HM07|A1HM07_9FIRM Putative uncharacterized protein OS=Therm... 40 0.054
tr|A5B6Y9|A5B6Y9_VITVI Photosystem I P700 chlorophyll A apoprote... 38 0.27
tr|Q6AV58|Q6AV58_ORYSJ Putative uncharacterized protein OSJNBb01... 37 0.46
tr|A8LKH8|A8LKH8_DINSH H+transporting two-sector ATPase B/B' sub... 37 0.60
tr|B4VCZ2|B4VCZ2_9ACTO Putative uncharacterized protein OS=Strep... 36 1.0
tr|B1BE08|B1BE08_CLOBO Putative uncharacterized protein OS=Clost... 36 1.3
tr|B1BC32|B1BC32_CLOBO Putative uncharacterized protein OS=Clost... 36 1.3
tr|Q0MX19|Q0MX19_ARAHY Leucine rich protein OS=Arachis hypogaea ... 36 1.3
tr|B5GYY5|B5GYY5_STRCL Putative uncharacterized protein OS=Strep... 30 6.3
tr|B4VCZ3|B4VCZ3_9ACTO Putative uncharacterized protein OS=Strep... 30 6.3
tr|B5J1X7|B5J1X7_9RHOB ATP synthase B/B' CF(0) superfamily OS=Oc... 33 6.6
tr|B5GFB2|B5GFB2_9ACTO Predicted protein OS=Streptomyces sp. SPB... 30 8.1
tr|Q2CDQ4|Q2CDQ4_9RHOB FoF1 ATP synthase, subunit B OS=Oceanicol... 33 8.6
tr|A3JNA5|A3JNA5_9RHOB FoF1 ATP synthase, subunit B OS=Rhodobact... 33 8.6

>tr|A6N1H4|A6N1H4_ORYSI Retrotransposon protein OS=Oryza sativa
subsp. indica PE=4 SV=1
Length = 109

Score = 135 bits (339), Expect = 2e-30
Identities = 75/114 (65%), Positives = 80/114 (70%), Gaps = 2/114 (1%)
Frame = +1

Query: 13 MPLEPRASWFSPKCVEAQQLTRPSRGKAPFRCGLRE--RYQIEANSEY*M*RASKRNEGK 186
MPLEPRASWFSPKCVEAQQLT K F G + + N+ Y + G
Sbjct: 1 MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGCASGTKSRQTLNTRY-----DPKITGV 55

Query: 187 GSTSETMRDKLHRREGNSPDHQLRPLNDRSVVKEVGVQRQAGGLPRSSHP*KSA 348
S SETM DKLHRREGNSPDHQLRPLNDRSV+KEVGVQRQ GGLPRSSHP KSA
Sbjct: 56 RSASETMGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPLKSA 109


>tr|B7FGU0|B7FGU0_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=4 SV=1
Length = 102

Score = 124 bits (312), Expect = 2e-27
Identities = 70/110 (63%), Positives = 74/110 (67%), Gaps = 2/110 (1%)
Frame = +1

Query: 13 MPLEPRASWFSPKCVEAQQLTRPSRGKAPFRCGLRE--RYQIEANSEY*M*RASKRNEGK 186
MPLEPRASWFSPKCVEAQQLT K F G + + N+ Y
Sbjct: 1 MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYPW--------RV 52

Query: 187 GSTSETMRDKLHRREGNSPDHQLRPLNDRSVVKEVGVQRQAGGLPRSSHP 336
S SE M DKLHRREGNSPDHQLRPLNDRSV+KEVGVQRQ GGLPRSSHP
Sbjct: 53 KSASEAMGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHP 102


>tr|Q5M9Z9|Q5M9Z9_TOBAC Putative uncharacterized protein orf106b
OS=Nicotiana tabacum GN=orf106b PE=4 SV=1
Length = 106

Score = 62.0 bits (149), Expect(2) = 5e-18
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -3

Query: 222 VKLIPHRLTG*PFSFVPFTCTLHLVFRVCLDLVPLSQPAPERCFTPR 82
+KLIPHRLT P P +LVFRVCLDLVPLS+PAP+ CFTPR
Sbjct: 1 MKLIPHRLTSRPCP--PLILRSYLVFRVCLDLVPLSRPAPKPCFTPR 45



Score = 52.8 bits (125), Expect(2) = 5e-18
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -1

Query: 74 VNCCASTHFGENQLALGSSGISPL 3
VNCCASTHFGENQLALG+SGISPL
Sbjct: 48 VNCCASTHFGENQLALGASGISPL 71


>tr|Q85WT3|Q85WT3_PINKO ORF46f OS=Pinus koraiensis PE=4 SV=1
Length = 46

Score = 87.4 bits (215), Expect = 4e-16
Identities = 42/46 (91%), Positives = 42/46 (91%)
Frame = +1

Query: 13 MPLEPRASWFSPKCVEAQQLTRPSRGKAPFRCGLRERYQIEANSEY 150
MPLEPRASWFSPKCVEAQQLT PSRGKA FR G RERYQIEANSEY
Sbjct: 1 MPLEPRASWFSPKCVEAQQLTGPSRGKALFRYGPRERYQIEANSEY 46


>tr|A9PE47|A9PE47_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 59

Score = 51.2 bits (121), Expect(2) = 1e-13
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +2

Query: 80 HLGVKHRSGAGCESGTKSRQTLNTRCNVQVKGTK 181
HLGVKH GAG ESGTKSRQTLNTR ++++ G K
Sbjct: 23 HLGVKHCFGAGRESGTKSRQTLNTRYDLKITGVK 56



Score = 48.9 bits (115), Expect(2) = 1e-13
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1

Query: 13 MPLEPRASWFSPKCVEAQQLT 75
MPLEPRASWFSPKCVEAQQLT
Sbjct: 1 MPLEPRASWFSPKCVEAQQLT 21


>tr|Q9RXQ4|Q9RXQ4_DEIRA Putative uncharacterized protein
OS=Deinococcus radiodurans GN=DR_0254 PE=4 SV=1
Length = 139

Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/49 (69%), Positives = 36/49 (73%)
Frame = -1

Query: 398 LSPAHLRRKSA*SVSYYALFQGWLLLGKPPACLCTPTSFTTERSFRGLS 252
LSP H RR VSYYALF+GWLLL +PP CLC TS TTERSFR LS
Sbjct: 91 LSPDHFRRIVTRPVSYYALFEGWLLLSQPPGCLCDDTSLTTERSFRDLS 139


>tr|Q9RS75|Q9RS75_DEIRA Putative uncharacterized protein
OS=Deinococcus radiodurans GN=DR_2252 PE=4 SV=1
Length = 133

Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/49 (69%), Positives = 36/49 (73%)
Frame = -1

Query: 398 LSPAHLRRKSA*SVSYYALFQGWLLLGKPPACLCTPTSFTTERSFRGLS 252
LSP H RR VSYYALF+GWLLL +PP CLC TS TTERSFR LS
Sbjct: 85 LSPDHFRRIVTRPVSYYALFEGWLLLSQPPGCLCDDTSLTTERSFRDLS 133


>tr|A7QCF1|A7QCF1_VITVI Chromosome undetermined scaffold_77, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00035369001 PE=4 SV=1
Length = 235

Score = 46.6 bits (109), Expect(2) = 9e-11
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = -1

Query: 74 VNCCASTHFGENQLALGSSGISPL 3
VN CASTHFGENQLALGSS ISPL
Sbjct: 57 VNRCASTHFGENQLALGSSDISPL 80



Score = 43.5 bits (101), Expect(2) = 9e-11
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = -3

Query: 150 VFRVCLDLVPLSQPAPERCFTPR 82
+FRVCLDLVPLS+PA ++CFTPR
Sbjct: 32 MFRVCLDLVPLSRPALKQCFTPR 54


>tr|B3D9S7|B3D9S7_BURM1 Putative uncharacterized protein
OS=Burkholderia multivorans (strain ATCC 17616 / 249)
GN=BMULJ_05092 PE=4 SV=1
Length = 123

Score = 61.2 bits (147), Expect = 3e-08
Identities = 36/81 (44%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = -1

Query: 515 TQADILASASSTPARTGASIWGGTLPYR-CFLTSHSFGRPLSPAHLRRKSA*SVSYYALF 339
T I S +S+ S GTL Y C S + L+P HL R++ SVSYYA F
Sbjct: 43 THVSIRTSDTSSTLYKAPSQAYGTLSYHACKHASAASVYGLAPLHLPRRTTRSVSYYAFF 102

Query: 338 QGWLLLGKPPACLCTPTSFTT 276
+GWLLL +PP C PTSF T
Sbjct: 103 KGWLLLSQPPDCFSLPTSFPT 123


>tr|A1IW39|A1IW39_9LAMI Putative uncharacterized protein ophh-69
(Fragment) OS=Phillyrea latifolia GN=ophh-69 PE=2 SV=1
Length = 166

Score = 59.3 bits (142), Expect = 1e-07
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = +3

Query: 387 SGTKRSAEAVGCQKTSVGERSAPDGSTSASRCGRSGSENVGLSNEN 524
+G + AVGC+ TSVGERSA +GS AS GRSGSENVGLSN N
Sbjct: 100 AGDVQGCRAVGCKNTSVGERSALEGSPRASSGGRSGSENVGLSNAN 145



Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3

Query: 411 AVGCQKTSVGERSAPDGSTSASRCGRSGSENVGLSNEN 524
AVGC+ TSVGERSA +GS S GRSGSENVGLSN N
Sbjct: 3 AVGCKNTSVGERSALEGSPRVSSGGRSGSENVGLSNAN 40