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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921628
Clone id YMU001_000152_C08
Library
Length 579
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000152_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GAAGAGGTACTGCATGGAAAGCTCAAAAGGAGAAAGATTGATGCAGCCATTGTGTGTTGT
GGCAACACTCACTACTGGAAAGTTCAGATTTACGGTTACGTCTTGGATTTGAGAGATTCA
GCAGGTTCTCTCACACCAAGGGTTATGGAGATTTGCAGGGAGTTAATTGCCAGCTTATGT
TTGTAAATTTTCCTGGTTATAAGCCTCTTGTAATTACACCCGGTTGAGAACATCCTTTTG
GATGAAAGGGTGAGTTTTTAATGGTTTCATATGTTAGTTCTTTGCTTAGCCCGCCTGCCG
GGCACACACTGTAAAATAAAGCTTGTCACAGGCAGGCTAATGCCCAGATTTGTATGATTG
TATGTGGTGCTTCACATTTGCGCATGGCAGCTTTCCAAAGCGCTTTCAAGTACCATTTGG
CTAAGTCCATTTCAGCATACATGTAGATGCTGACTATATAAGAATGCCTTTAGGGGCAGG
TGGTGGAATGAGGGGGGACCTCTCAAACGTAACAAATGGACAATCGTTTTGCACAAGTGA
AAATTGAACCAGAGAAATGAAGCAGTCACCTCATGCTCT
■■Homology search results ■■ -
sp_hit_id Q8YRC9
Definition sp|Q8YRC9|THIG_ANASP Bifunctional protein goxB/thiG OS=Anabaena sp. (strain PCC 7120)
Align length 51
Score (bit) 30.8
E-value 5.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921628|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_C08.
         (579 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8YRC9|THIG_ANASP Bifunctional protein goxB/thiG OS=Anabaena ...    31   5.1  
sp|P53306|GPI1_YEAST Phosphatidylinositol N-acetylglucosaminyltr...    30   6.7  

>sp|Q8YRC9|THIG_ANASP Bifunctional protein goxB/thiG OS=Anabaena sp.
           (strain PCC 7120) GN=goxB/thiG PE=3 SV=1
          Length = 652

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -2

Query: 578 EHEVTASFLWFNFHLCKTIV----HLLRLRGPPSFHHLPLKAFLYSQHLHV 438
           EH V A+  W N  L   +      +LRLR P S   LPLK  L+ +++++
Sbjct: 196 EHYVLATGAWANELLPLPVTPRKGQMLRLRVPESVPELPLKRVLFGKNIYI 246


>sp|P53306|GPI1_YEAST Phosphatidylinositol
           N-acetylglucosaminyltransferase subunit GPI1
           OS=Saccharomyces cerevisiae GN=GPI1 PE=1 SV=1
          Length = 609

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -1

Query: 198 NQENLQT*AGN*LPANLHNPWCERTC*ISQIQDVTVNLNFPVVSVATTHNGCINLSPFEL 19
           +QENL+    N + A     WC  TC    +  +   L F + S+A+  +  +N S F+L
Sbjct: 159 SQENLRGTMLNSVAA-----WCSSTCIYKMVAKIGFYLTFVICSIASLVSSLLNYSHFQL 213
tr_hit_id B0JHD1
Definition tr|B0JHD1|B0JHD1_MICAN 2-octaprenyl-6-methoxyphenol hydroxylase OS=Microcystis aeruginosa (strain NIES-843)
Align length 74
Score (bit) 36.6
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921628|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_C08.
         (579 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0JHD1|B0JHD1_MICAN 2-octaprenyl-6-methoxyphenol hydroxylase ...    37   1.0  
tr|Q118Y7|Q118Y7_TRIEI TPR repeat OS=Trichodesmium erythraeum (s...    34   6.7  
tr|A8YBA2|A8YBA2_MICAE Genome sequencing data, contig C269 OS=Mi...    33   8.8  

>tr|B0JHD1|B0JHD1_MICAN 2-octaprenyl-6-methoxyphenol hydroxylase
           OS=Microcystis aeruginosa (strain NIES-843) GN=MAE_24610
           PE=4 SV=1
          Length = 403

 Score = 36.6 bits (83), Expect = 1.0
 Identities = 21/74 (28%), Positives = 33/74 (44%)
 Frame = -1

Query: 564 CFISLVQFSLVQNDCPFVTFERSPLIPPPAPKGILI*SASTCMLKWT*PNGT*KRFGKLP 385
           C    ++  L +ND  F  F       P  P GIL    + C + WT P+G  K+  ++P
Sbjct: 188 CVAFTIKHQLDRNDTAFERFW------PTGPMGILPLQGNRCQIVWTNPHGEAKKLQEMP 241

Query: 384 CANVKHHIQSYKSG 343
            A     +++Y  G
Sbjct: 242 EAEFIKKLEAYTGG 255


>tr|Q118Y7|Q118Y7_TRIEI TPR repeat OS=Trichodesmium erythraeum (strain
            IMS101) GN=Tery_0481 PE=4 SV=1
          Length = 3145

 Score = 33.9 bits (76), Expect = 6.7
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +3

Query: 129  SHTKGYGDLQGVNCQLMFVNFPGYKPLVITP 221
            +H  G+G + G+N  L  +  PGYKPL++TP
Sbjct: 2766 NHHTGWG-IYGINLTLQLLQTPGYKPLLLTP 2795


>tr|A8YBA2|A8YBA2_MICAE Genome sequencing data, contig C269
           OS=Microcystis aeruginosa PCC 7806 GN=IPF_4515 PE=4 SV=1
          Length = 401

 Score = 33.5 bits (75), Expect = 8.8
 Identities = 20/74 (27%), Positives = 32/74 (43%)
 Frame = -1

Query: 564 CFISLVQFSLVQNDCPFVTFERSPLIPPPAPKGILI*SASTCMLKWT*PNGT*KRFGKLP 385
           C    ++  L +ND  F  F       P  P GIL    + C + WT P+   K+  ++P
Sbjct: 188 CVAFTIKHQLDRNDTAFERFW------PTGPMGILPLQGNRCQIVWTNPHQEAKKLQEMP 241

Query: 384 CANVKHHIQSYKSG 343
            A     +++Y  G
Sbjct: 242 EAEFIDKLEAYTGG 255