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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921641
Clone id YMU001_000152_E01
Library
Length 590
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000152_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ACTCAGTCAGCAGGCATCTTAACATGCCCTCTAGACCTGTACCAATAACTACCTACCTCT
CATCAACCATAATCTTCACAAAGAAGGCATAGTGCAATTAGAATGCTTCGTGTGACCTTG
GCTTCATGTTTCTTGAAGGTCAATATCTTTCAAAATACAAGCCTTATGATCTCAAGGAAA
GGAATAAGCAAACCTGTTAGCAATGGACCTTTGTCTTCAGAAATTAACGTTCGTGTAATC
TGTCAAGCACACTCAAAGAAGTACTAAATCATAAAAGTAATAGAACAAATGCACTTTACA
GAAAACGTGTATAATGTTTATACCCTCTTAGACAAGCTTATGGTGAAATTTTCTGGAGAT
ATGCCTTTCCCTAAACCCGGCGAGTCTTTGTACTGGCAAAGTGAATGCATAGGATTGCTT
CTTCCAAGGAACTGGATGTCATAGGCAGCACGGGGTTGCTTTGTAGAGGATCCAAGGAGC
AGTAGCACTGAGGGCATGAAGGAAAGCGTCTGGAAAGCTCCTTGCAAAGCAGTAAGAAGG
GCCTGAATGGATTGTCTCAACTTTTCTCTCCTCTTCATCACCCTCTTGAC
■■Homology search results ■■ -
sp_hit_id Q11JM4
Definition sp|Q11JM4|GCH1_MESSB GTP cyclohydrolase 1 OS=Mesorhizobium sp. (strain BNC1)
Align length 84
Score (bit) 30.8
E-value 5.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921641|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_E01.
         (590 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q11JM4|GCH1_MESSB GTP cyclohydrolase 1 OS=Mesorhizobium sp. (...    31   5.3  
sp|Q9FLF7|MYST1_ARATH Probable MYST-like histone acetyltransfera...    30   9.0  

>sp|Q11JM4|GCH1_MESSB GTP cyclohydrolase 1 OS=Mesorhizobium sp.
           (strain BNC1) GN=folE PE=3 SV=1
          Length = 222

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
 Frame = -1

Query: 569 REKLRQSIQALLTALQGAFQTLSFMPSVLLLLGSSTKQPRAAYDIQFLGRSNPMHSLCQY 390
           RE L+++   ++ A Q  F      P+  L     T +  A Y+   L +  P HS C++
Sbjct: 55  REGLKETPARVVKAYQELFGGYDLCPAEEL---GRTFEEVAGYEDMVLVKDIPFHSHCEH 111

Query: 389 KDSPGLGK---GISPENFTISLSK 327
              P +GK   G  P+   + LSK
Sbjct: 112 HMVPIVGKAHVGYLPDGKVVGLSK 135


>sp|Q9FLF7|MYST1_ARATH Probable MYST-like histone acetyltransferase
           1 OS=Arabidopsis thaliana GN=HAG4 PE=2 SV=1
          Length = 445

 Score = 30.0 bits (66), Expect = 9.0
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = +1

Query: 160 SLMISRKGISKPVSNGPLSSEINVRVICQAHSKKY*IIKVIEQMHFTENVYNVY 321
           +L  S    SK    G L  E+  RV+CQ    KY  +KVIE+       +N Y
Sbjct: 41  ALTNSESDASKKRRMGVLPLEVGTRVMCQWRDGKYHPVKVIERRKNYNGGHNDY 94
tr_hit_id Q6AVD4
Definition tr|Q6AVD4|Q6AVD4_ORYSJ Os05g0251400 protein OS=Oryza sativa subsp. japonica
Align length 52
Score (bit) 40.4
E-value 0.075
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921641|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_E01.
         (590 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6AVD4|Q6AVD4_ORYSJ Os05g0251400 protein OS=Oryza sativa subs...    40   0.075
tr|A3B1X1|A3B1X1_ORYSJ Putative uncharacterized protein OS=Oryza...    40   0.075
tr|A2Y2F6|A2Y2F6_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.075
tr|Q9ZVS0|Q9ZVS0_ARATH F15k9.21 OS=Arabidopsis thaliana GN=F15K9...    39   0.22 
tr|Q5Q0J3|Q5Q0J3_ARATH Putative uncharacterized protein OS=Arabi...    39   0.22 
tr|Q5Q0J2|Q5Q0J2_ARATH Putative uncharacterized protein OS=Arabi...    39   0.22 
tr|B6PLN6|B6PLN6_BRAFL Putative uncharacterized protein (Fragmen...    34   5.4  
tr|B6LPK7|B6LPK7_BRAFL Putative uncharacterized protein (Fragmen...    34   5.4  
tr|Q5CHR2|Q5CHR2_CRYHO Putative uncharacterized protein OS=Crypt...    33   9.2  

>tr|Q6AVD4|Q6AVD4_ORYSJ Os05g0251400 protein OS=Oryza sativa subsp.
           japonica GN=OJ1171_H02.9 PE=2 SV=1
          Length = 286

 Score = 40.4 bits (93), Expect = 0.075
 Identities = 20/52 (38%), Positives = 32/52 (61%)
 Frame = -1

Query: 590 VKRVMKRREKLRQSIQALLTALQGAFQTLSFMPSVLLLLGSSTKQPRAAYDI 435
           V+R +K++EKL   + ++ +ALQ A   +  +  VLL+LG S  +P   YDI
Sbjct: 100 VRRRIKKQEKLMNGLSSVFSALQKALDEVPSIEGVLLILGGSLVRPLFVYDI 151


>tr|A3B1X1|A3B1X1_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_017043 PE=4 SV=1
          Length = 314

 Score = 40.4 bits (93), Expect = 0.075
 Identities = 20/52 (38%), Positives = 32/52 (61%)
 Frame = -1

Query: 590 VKRVMKRREKLRQSIQALLTALQGAFQTLSFMPSVLLLLGSSTKQPRAAYDI 435
           V+R +K++EKL   + ++ +ALQ A   +  +  VLL+LG S  +P   YDI
Sbjct: 142 VRRRIKKQEKLMNGLSSVFSALQKALDEVPSIEGVLLILGGSLVRPLFVYDI 193


>tr|A2Y2F6|A2Y2F6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_19184 PE=4 SV=1
          Length = 272

 Score = 40.4 bits (93), Expect = 0.075
 Identities = 20/52 (38%), Positives = 32/52 (61%)
 Frame = -1

Query: 590 VKRVMKRREKLRQSIQALLTALQGAFQTLSFMPSVLLLLGSSTKQPRAAYDI 435
           V+R +K++EKL   + ++ +ALQ A   +  +  VLL+LG S  +P   YDI
Sbjct: 100 VRRRIKKQEKLMNGLSSVFSALQKALDEVPSIEGVLLILGGSLVRPLFVYDI 151


>tr|Q9ZVS0|Q9ZVS0_ARATH F15k9.21 OS=Arabidopsis thaliana GN=F15K9.21
           PE=4 SV=1
          Length = 275

 Score = 38.9 bits (89), Expect = 0.22
 Identities = 21/57 (36%), Positives = 35/57 (61%)
 Frame = -1

Query: 590 VKRVMKRREKLRQSIQALLTALQGAFQTLSFMPSVLLLLGSSTKQPRAAYDIQFLGR 420
           VK  +K+ EKL ++I +L +ALQ   +    +  V+L+LG S  +P+ AY++ F  R
Sbjct: 91  VKNEIKKLEKLMKTISSLRSALQLMIREAPGIQKVVLILGGSPLRPQNAYELLFTQR 147


>tr|Q5Q0J3|Q5Q0J3_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana GN=At1g03180 PE=2 SV=1
          Length = 265

 Score = 38.9 bits (89), Expect = 0.22
 Identities = 21/57 (36%), Positives = 35/57 (61%)
 Frame = -1

Query: 590 VKRVMKRREKLRQSIQALLTALQGAFQTLSFMPSVLLLLGSSTKQPRAAYDIQFLGR 420
           VK  +K+ EKL ++I +L +ALQ   +    +  V+L+LG S  +P+ AY++ F  R
Sbjct: 93  VKNEIKKLEKLMKTISSLRSALQLMIREAPGIQKVVLILGGSPLRPQNAYELLFTQR 149


>tr|Q5Q0J2|Q5Q0J2_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana GN=At1g03180 PE=2 SV=1
          Length = 251

 Score = 38.9 bits (89), Expect = 0.22
 Identities = 21/57 (36%), Positives = 35/57 (61%)
 Frame = -1

Query: 590 VKRVMKRREKLRQSIQALLTALQGAFQTLSFMPSVLLLLGSSTKQPRAAYDIQFLGR 420
           VK  +K+ EKL ++I +L +ALQ   +    +  V+L+LG S  +P+ AY++ F  R
Sbjct: 79  VKNEIKKLEKLMKTISSLRSALQLMIREAPGIQKVVLILGGSPLRPQNAYELLFTQR 135


>tr|B6PLN6|B6PLN6_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_252642 PE=4 SV=1
          Length = 239

 Score = 34.3 bits (77), Expect = 5.4
 Identities = 18/49 (36%), Positives = 31/49 (63%)
 Frame = -1

Query: 575 KRREKLRQSIQALLTALQGAFQTLSFMPSVLLLLGSSTKQPRAAYDIQF 429
           KR + +   ++ LL  L+  F +L+F+P VL+L+G++   P+ AY I F
Sbjct: 67  KRCKHVVDCMEELLPHLEDLF-SLTFVPQVLILIGATAVSPKEAYIINF 114


>tr|B6LPK7|B6LPK7_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_210512 PE=4 SV=1
          Length = 237

 Score = 34.3 bits (77), Expect = 5.4
 Identities = 18/49 (36%), Positives = 31/49 (63%)
 Frame = -1

Query: 575 KRREKLRQSIQALLTALQGAFQTLSFMPSVLLLLGSSTKQPRAAYDIQF 429
           KR + +   ++ LL  L+  F +L+F+P VL+L+G++   P+ AY I F
Sbjct: 65  KRCKHVVDCMEELLPHLEDLF-SLTFVPQVLILIGATAVSPKEAYIINF 112


>tr|Q5CHR2|Q5CHR2_CRYHO Putative uncharacterized protein
            OS=Cryptosporidium hominis GN=Chro.30470 PE=4 SV=1
          Length = 1085

 Score = 33.5 bits (75), Expect = 9.2
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = +1

Query: 121  ASCFLKVNIFQNTSLMISRKGISKPVSNGPLSSEINVRV--ICQAHSKKY*IIKVIEQMH 294
            +S  +  N F   SL I          N  L  E+N  +  + ++H  K  + K++E M+
Sbjct: 934  SSLSIVANNFVVVSLSIRSVEFLAGTLNRILDKELNQSISKVLKSHKSKSYVNKILENMN 993

Query: 295  FTENVYNVYTLLDKLMV 345
            F +NV+    LL K+ +
Sbjct: 994  FVDNVFETKFLLSKISI 1010