BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921644|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_E04.
         (307 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P20334|TNR9_MOUSE Tumor necrosis factor receptor superfamily ...    29   6.4  
sp|P21949|MBHL_AZOVI Uptake hydrogenase large subunit OS=Azotoba...    29   6.4  

>sp|P20334|TNR9_MOUSE Tumor necrosis factor receptor superfamily
           member 9 OS=Mus musculus GN=Tnfrsf9 PE=1 SV=1
          Length = 256

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 110 CRPSLFARAYNSACKAC*GDGFDS 181
           C+P  F R YN  CK+C    F S
Sbjct: 31  CQPGTFCRKYNPVCKSCPPSTFSS 54


>sp|P21949|MBHL_AZOVI Uptake hydrogenase large subunit
           OS=Azotobacter vinelandii GN=hoxG PE=3 SV=1
          Length = 602

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +3

Query: 42  ARHLRIPTSLHCARHL*FLVLNVAGHHSSHGLTILHAKHARAMDLILPLHALR 200
           A  +RIP + H  R+L    L V  H       I+H  H  A+D + P++AL+
Sbjct: 92  ALDIRIPYNAHLIRNLMDKTLQVHDH-------IVHFYHLHALDWVNPVNALK 137

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921644|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_E04.
         (307 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7T327|A7T327_NEMVE Predicted protein OS=Nematostella vectens...    37   0.38 
tr|B7U381|B7U381_HRSV Glycoprotein (Fragment) OS=Human respirato...    35   1.5  
tr|A7T8H2|A7T8H2_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   5.5  
tr|B5LB75|B5LB75_HRSV Truncated attachment glycoprotein (Fragmen...    33   9.4  
tr|A4H6T2|A4H6T2_LEIBR Putative uncharacterized protein OS=Leish...    33   9.4  

>tr|A7T327|A7T327_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g143825 PE=4 SV=1
          Length = 244

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 24/59 (40%), Positives = 29/59 (49%)
 Frame = +3

Query: 33  LHCARHLRIPTSLHCARHL*FLVLNVAGHHSSHGLTILHAKHARAMDLILPLHALRFRY 209
           LHC RHL +   LHC RH   LVL    H   H L + +  H R   L+L  H  R R+
Sbjct: 95  LHCMRHLVLQYHLHCMRH---LVLQYHLHRMQH-LVLQYHLH-RMQHLVLQYHLHRMRH 148



 Score = 35.8 bits (81), Expect = 1.1
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
 Frame = +3

Query: 33  LHCARHLRIPTSLHCARHL*FLVLNVAGHHSSHGLTILHAKHARAMDLILPLHALR---F 203
           LHC RHL +   LHC RH   LVL    H   H +   H    + + L   LH ++    
Sbjct: 35  LHCMRHLVLQYHLHCMRH---LVLQYHLHRMQHLVLQYHLHRMQHLVLQYHLHCMQHLVL 91

Query: 204 RYH 212
           +YH
Sbjct: 92  QYH 94



 Score = 32.7 bits (73), Expect = 9.4
 Identities = 22/59 (37%), Positives = 29/59 (49%)
 Frame = +3

Query: 33  LHCARHLRIPTSLHCARHL*FLVLNVAGHHSSHGLTILHAKHARAMDLILPLHALRFRY 209
           LHC +HL +   LHC RH   LVL    H   H L + +  H R   L+L  H  R ++
Sbjct: 23  LHCMQHLVLQYHLHCMRH---LVLQYHLHCMRH-LVLQYHLH-RMQHLVLQYHLHRMQH 76


>tr|B7U381|B7U381_HRSV Glycoprotein (Fragment) OS=Human respiratory
           syncytial virus GN=G PE=4 SV=1
          Length = 107

 Score = 35.4 bits (80), Expect = 1.5
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
 Frame = +3

Query: 15  HRIPTSLHCARHLRIPT--------SLHCARHL*FLVLNVAGHHSSHGLTILH--AKHAR 164
           H+ PT +HCARH  I T        ++HCARH      N    H+S  + +L+   KH +
Sbjct: 31  HQYPT-IHCARHNHIKTHRKRHQHLTIHCARH------NHIKTHNSTAIPLLNHPRKHNQ 83

Query: 165 AMDLILPLHALRFRYHTRSSV 227
                  + AL  ++H ++ V
Sbjct: 84  LHTNTHSIRALHIKFHPKTLV 104


>tr|A7T8H2|A7T8H2_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g150215 PE=4 SV=1
          Length = 96

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 33  LHCARHLRIPTSLHCARHL*FLVLNVAGH--HSSHGLTILHAKH 158
           L+CA HL+     HCA HL ++      H  H +H L  +H +H
Sbjct: 33  LYCAHHLKYVHDEHCAHHLKYVHDERCAHHLHCAHHLKYVHDEH 76


>tr|B5LB75|B5LB75_HRSV Truncated attachment glycoprotein (Fragment)
           OS=Human respiratory syncytial virus B PE=4 SV=1
          Length = 118

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
 Frame = +3

Query: 15  HRIPTSLHCARHLRIPT--------SLHCARHL*FLVLNVAGHHSSHGLTILH--AKHAR 164
           H+ PT +HCARH  I T        ++HCARH      N    H+   + +L+   KH +
Sbjct: 31  HQHPT-IHCARHNYIKTHRKRHQHLTIHCARH------NHIKTHNPTAIPLLNHPRKHTQ 83

Query: 165 AMDLILPLHALRFRYHTRSSV 227
                  + AL  ++H ++ V
Sbjct: 84  LHTNTHSIRALHIKFHLKTLV 104


>tr|A4H6T2|A4H6T2_LEIBR Putative uncharacterized protein
           OS=Leishmania braziliensis GN=LbrM12_V2.0190 PE=4 SV=1
          Length = 427

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
 Frame = +3

Query: 12  AHRIPTSLHCARHLRIPTSLHCA---RHL*FLVLNVAGHHSS----HGLTILHAKHARAM 170
           AHR+   LH  + LR P  LHC+     L FL L      SS    HG+ +  +   R  
Sbjct: 24  AHRLLLCLHVVKVLRAPDQLHCSDSVNPLVFLALGGVTSSSSCSVEHGVPVEESLFTRLY 83

Query: 171 DLILPLH-ALRFRYHTR 218
           + ++    ALR   +TR
Sbjct: 84  ETVVEYESALRLENYTR 100