BP921658
Clone id YMU001_000152_F06
Library
Length 158
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000152_F06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGCTGGTTTATACCATTGATGGGGCGGGCATCGCTCATACCAGTGTATGACATACTCTGG
GTTTGTCTTGTTGAAATCTTTCAGTAGTGCAATTTCTGCAGAATCCTCACTCTACTTTAG
CCTCTTTGCTAGGCTGTCAATGTATCCAGAATATGCAC
■■Homology search results ■■ -
sp_hit_id Q8LQJ8
Definition sp|Q8LQJ8|FTSH5_ORYSJ Cell division protease ftsH homolog 5, mitochondrial OS=Oryza sativa subsp. japonica
Align length 42
Score (bit) 34.3
E-value 0.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921658|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_F06.
(158 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8LQJ8|FTSH5_ORYSJ Cell division protease ftsH homolog 5, mit... 34 0.20
sp|Q8LQJ9|FTSH4_ORYSJ Cell division protease ftsH homolog 4, mit... 33 0.45

>sp|Q8LQJ8|FTSH5_ORYSJ Cell division protease ftsH homolog 5,
mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH5
PE=3 SV=1
Length = 715

Score = 34.3 bits (77), Expect = 0.20
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = -3

Query: 150 SGYIDSLAKRLK*SEDSAEIALLKDFNKTNPEYVIHWYERCP 25
S Y+ S A+R++ + +E +LLK+ +++PE VI +E P
Sbjct: 51 SSYVGSFARRMRQMDSPSEASLLKEIYRSDPERVIQIFESQP 92


>sp|Q8LQJ9|FTSH4_ORYSJ Cell division protease ftsH homolog 4,
mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH4
PE=3 SV=1
Length = 709

Score = 33.1 bits (74), Expect = 0.45
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = -3

Query: 150 SGYIDSLAKRLK*SEDSAEIALLKDFNKTNPEYVIHWYERCP 25
S ++ SLA+R++ + +E +LLK+ K++PE VI +E P
Sbjct: 51 SSFVGSLARRVQNLDVPSEASLLKEIYKSDPERVIQIFESQP 92


tr_hit_id A9T7X2
Definition tr|A9T7X2|A9T7X2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 52
Score (bit) 36.6
E-value 0.64
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921658|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_F06.
(158 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9T7X2|A9T7X2_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.64
tr|A9RRD9|A9RRD9_PHYPA Predicted protein OS=Physcomitrella paten... 36 0.84
tr|B8Q955|B8Q955_TRIMO FtsH-like protein (Fragment) OS=Triticum ... 35 2.5
tr|B8AAS6|B8AAS6_ORYSI Putative uncharacterized protein OS=Oryza... 34 3.2
tr|A2WRN7|A2WRN7_ORYSI Putative uncharacterized protein OS=Oryza... 33 7.1

>tr|A9T7X2|A9T7X2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_192442 PE=4 SV=1
Length = 687

Score = 36.6 bits (83), Expect = 0.64
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 8/52 (15%)
Frame = -3

Query: 150 SGYIDSLAKRLK*SEDSA-------EIALLKDFNKTNPEYVIHWYERCP-PH 19
S Y + A+RL+ SE + +++LLK N+ +PE VI W+E P PH
Sbjct: 20 SSYTSNYARRLEQSEAGSKLDSEVKQVSLLKQLNRVDPESVIRWFESRPLPH 71


>tr|A9RRD9|A9RRD9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_177441 PE=4 SV=1
Length = 677

Score = 36.2 bits (82), Expect = 0.84
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 7/49 (14%)
Frame = -3

Query: 150 SGYIDSLAKRLK*SE-------DSAEIALLKDFNKTNPEYVIHWYERCP 25
S Y + A+RL+ +E + +++LLK NK +PE VI W+E P
Sbjct: 20 SSYTSNYARRLEHAEGGSKLGSEDKQVSLLKQLNKVDPESVIQWFESRP 68


>tr|B8Q955|B8Q955_TRIMO FtsH-like protein (Fragment) OS=Triticum
monococcum PE=4 SV=1
Length = 80

Score = 34.7 bits (78), Expect = 2.5
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = -3

Query: 150 SGYIDSLAKRLK*SEDSAEIALLKDFNKTNPEYVIHWYERCP 25
S Y+ S A+RL+ + ++ +LLK+ ++NPE V+ +E P
Sbjct: 9 SSYVGSFARRLRDFDTPSDASLLKEIYRSNPERVVQIFESQP 50


>tr|B8AAS6|B8AAS6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_02523 PE=4 SV=1
Length = 702

Score = 34.3 bits (77), Expect = 3.2
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = -3

Query: 150 SGYIDSLAKRLK*SEDSAEIALLKDFNKTNPEYVIHWYERCP 25
S Y+ S A+R++ + +E +LLK+ +++PE VI +E P
Sbjct: 44 SSYVGSFARRMRQMDSPSEASLLKEIYRSDPERVIQIFESQP 85


>tr|A2WRN7|A2WRN7_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_02522 PE=4 SV=1
Length = 709

Score = 33.1 bits (74), Expect = 7.1
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = -3

Query: 150 SGYIDSLAKRLK*SEDSAEIALLKDFNKTNPEYVIHWYERCP 25
S ++ SLA+R++ + +E +LLK+ K++PE VI +E P
Sbjct: 51 SSFVGSLARRVQNLDVPSEASLLKEIYKSDPERVIQIFESQP 92