NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921667
Clone id YMU001_000152_G04
Library
Length 558
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000152_G04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATGGTTGGAGACCTTATGAAGTCCATTTCTCTTCTGATATACAAGCCAGAGGAAGGTGCA
ATTGAAGAATGTGCTAGAGATTTCAATGCAAATTGGATGTCTGCTGTAGAGATTTTGGAT
GATGACATATATCTTGGTGCTGAAAACAATTTCAATTTGTTTACGGTGAGGAAGAATAGT
GATGCGGCCAGTGATGAGGAACGGAACAAGCTTGAAGTTGTTGGCGAATATCATCTGGGA
GAGTTTGTGAACCGTTTTCGGCATGGTTCCCTCGTCATGCGTCTTCCTGATATTGAAGCA
AGTCAGATACCCACAGTGATCTTTGGCACGGTGAACGGTGTGATTGGAGTGATTGCGTCT
TTACCACAAGAACAATATACTTTCCTGTCGAAGCTTCAGCAAAATCTTGTCAAAGTGATC
AAGGGTGTTGGTGGCCTCAGCCATGAGCAATGGCGCTCCTTCAGCAATGAGCGAAAGACG
GTTGATGCAAAGAATTTTCTTGATGGTGACCTTATTGAGTCGTTCTTGGATTTGAACAGG
CGCAGAATGGAGGAAATA
■■Homology search results ■■ -
sp_hit_id Q6QNU4
Definition sp|Q6QNU4|DDB1_SOLLC DNA damage-binding protein 1 OS=Solanum lycopersicum
Align length 186
Score (bit) 324.0
E-value 2.0e-88
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921667|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_G04.
         (558 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6QNU4|DDB1_SOLLC DNA damage-binding protein 1 OS=Solanum lyc...   324   2e-88
sp|Q6E7D1|DDB1_SOLCE DNA damage-binding protein 1 OS=Solanum che...   324   2e-88
sp|Q9M0V3|DDB1A_ARATH DNA damage-binding protein 1a OS=Arabidops...   319   5e-87
sp|O49552|DDB1B_ARATH DNA damage-binding protein 1b OS=Arabidops...   299   7e-81
sp|Q5R649|DDB1_PONAB DNA damage-binding protein 1 OS=Pongo abeli...   217   4e-56
sp|Q3U1J4|DDB1_MOUSE DNA damage-binding protein 1 OS=Mus musculu...   217   4e-56
sp|Q16531|DDB1_HUMAN DNA damage-binding protein 1 OS=Homo sapien...   217   4e-56
sp|P33194|DDB1_CERAE DNA damage-binding protein 1 OS=Cercopithec...   217   4e-56
sp|A1A4K3|DDB1_BOVIN DNA damage-binding protein 1 OS=Bos taurus ...   217   4e-56
sp|Q6P6Z0|DDB1_XENLA DNA damage-binding protein 1 OS=Xenopus lae...   216   6e-56
sp|Q805F9|DDB1_CHICK DNA damage-binding protein 1 OS=Gallus gall...   215   1e-55
sp|Q9ESW0|DDB1_RAT DNA damage-binding protein 1 OS=Rattus norveg...   214   2e-55
sp|Q9XYZ5|DDB1_DROME DNA damage-binding protein 1 OS=Drosophila ...   179   1e-44
sp|Q21554|DDB1_CAEEL DNA damage-binding protein 1 OS=Caenorhabdi...   111   3e-24
sp|O13807|DDB1_SCHPO DNA damage-binding protein 1 OS=Schizosacch...   100   8e-21
sp|Q54SA7|SF3B3_DICDI Probable splicing factor 3B subunit 3 OS=D...    70   7e-12
sp|Q9V726|CPSF1_DROME Cleavage and polyadenylation specificity f...    66   1e-10
sp|A1C3U1|CFT1_ASPCL Protein cft1 OS=Aspergillus clavatus GN=cft...    62   2e-09
sp|Q10570|CPSF1_HUMAN Cleavage and polyadenylation specificity f...    61   4e-09
sp|Q9EPU4|CPSF1_MOUSE Cleavage and polyadenylation specificity f...    59   1e-08
sp|Q10569|CPSF1_BOVIN Cleavage and polyadenylation specificity f...    59   2e-08
sp|Q5BDG7|CFT1_EMENI Protein cft1 OS=Emericella nidulans GN=cft1...    57   5e-08
sp|Q4WCL1|CFT1_ASPFU Protein cft1 OS=Aspergillus fumigatus GN=cf...    57   8e-08
sp|Q5RBI5|SF3B3_PONAB Splicing factor 3B subunit 3 OS=Pongo abel...    56   1e-07
sp|Q921M3|SF3B3_MOUSE Splicing factor 3B subunit 3 OS=Mus muscul...    56   1e-07
sp|Q15393|SF3B3_HUMAN Splicing factor 3B subunit 3 OS=Homo sapie...    56   1e-07
sp|A0JN52|SF3B3_BOVIN Splicing factor 3B subunit 3 OS=Bos taurus...    56   1e-07
sp|A1DB13|CFT1_NEOFI Protein cft1 OS=Neosartorya fischeri (strai...    56   1e-07
sp|Q1LVE8|SF3B3_DANRE Splicing factor 3B subunit 3 OS=Danio reri...    54   5e-07
sp|Q9FGR0|CPSF1_ARATH Probable cleavage and polyadenylation spec...    54   5e-07

>sp|Q6QNU4|DDB1_SOLLC DNA damage-binding protein 1 OS=Solanum
            lycopersicum GN=DDB1 PE=1 SV=1
          Length = 1090

 Score =  324 bits (831), Expect = 2e-88
 Identities = 162/186 (87%), Positives = 173/186 (93%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
            +VGDLMKSISLLI+K EEGAIEE ARD+NANWMSAVEILDDDIYLGAENNFNLFTVRKNS
Sbjct: 883  VVGDLMKSISLLIFKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 942

Query: 181  DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMRLPDIEASQIPTVIFGTVNGVIGVIAS 360
            + A+DEER++LEVVGEYHLGEFVNRFRHGSLVMRLPD +  QIPTVIFGTVNGVIGVIAS
Sbjct: 943  EGATDEERSRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS 1002

Query: 361  LPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLNR 540
            LP +QY FL KLQ NL KVIKGVGGLSHEQWRSF NE+KTVDAKNFLDGDLIESFLDL+R
Sbjct: 1003 LPHDQYLFLEKLQTNLRKVIKGVGGLSHEQWRSFYNEKKTVDAKNFLDGDLIESFLDLSR 1062

Query: 541  RRMEEI 558
             RMEEI
Sbjct: 1063 NRMEEI 1068


>sp|Q6E7D1|DDB1_SOLCE DNA damage-binding protein 1 OS=Solanum
            cheesmanii GN=DDB1 PE=3 SV=1
          Length = 1095

 Score =  324 bits (831), Expect = 2e-88
 Identities = 162/186 (87%), Positives = 173/186 (93%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
            +VGDLMKSISLLI+K EEGAIEE ARD+NANWMSAVEILDDDIYLGAENNFNLFTVRKNS
Sbjct: 888  VVGDLMKSISLLIFKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 947

Query: 181  DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMRLPDIEASQIPTVIFGTVNGVIGVIAS 360
            + A+DEER++LEVVGEYHLGEFVNRFRHGSLVMRLPD +  QIPTVIFGTVNGVIGVIAS
Sbjct: 948  EGATDEERSRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS 1007

Query: 361  LPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLNR 540
            LP +QY FL KLQ NL KVIKGVGGLSHEQWRSF NE+KTVDAKNFLDGDLIESFLDL+R
Sbjct: 1008 LPHDQYLFLEKLQTNLRKVIKGVGGLSHEQWRSFYNEKKTVDAKNFLDGDLIESFLDLSR 1067

Query: 541  RRMEEI 558
             RMEEI
Sbjct: 1068 NRMEEI 1073


>sp|Q9M0V3|DDB1A_ARATH DNA damage-binding protein 1a OS=Arabidopsis
            thaliana GN=DDB1A PE=1 SV=1
          Length = 1088

 Score =  319 bits (818), Expect = 5e-87
 Identities = 157/186 (84%), Positives = 173/186 (93%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
            +VGDLMKSISLL+YK EEGAIEE ARD+NANWMSAVEILDDDIYLGAENNFNL TV+KNS
Sbjct: 881  VVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVKKNS 940

Query: 181  DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMRLPDIEASQIPTVIFGTVNGVIGVIAS 360
            + A+DEER +LEVVGEYHLGEFVNRFRHGSLVMRLPD E  QIPTVIFGTVNGVIGVIAS
Sbjct: 941  EGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGVIAS 1000

Query: 361  LPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLNR 540
            LPQEQYTFL KLQ +L KVIKGVGGLSHEQWRSF+NE++T +A+NFLDGDLIESFLDL+R
Sbjct: 1001 LPQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSR 1060

Query: 541  RRMEEI 558
             +ME+I
Sbjct: 1061 NKMEDI 1066


>sp|O49552|DDB1B_ARATH DNA damage-binding protein 1b OS=Arabidopsis
            thaliana GN=DDB1B PE=1 SV=2
          Length = 1088

 Score =  299 bits (765), Expect = 7e-81
 Identities = 145/185 (78%), Positives = 169/185 (91%)
 Frame = +1

Query: 4    VGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNSD 183
            VGDLMKSISLLIYK EEGAIEE ARD+NANWM+AVEIL+DDIYLG +N FN+FTV+KN++
Sbjct: 882  VGDLMKSISLLIYKHEEGAIEERARDYNANWMTAVEILNDDIYLGTDNCFNIFTVKKNNE 941

Query: 184  AASDEERNKLEVVGEYHLGEFVNRFRHGSLVMRLPDIEASQIPTVIFGTVNGVIGVIASL 363
             A+DEER ++EVVGEYH+GEFVNRFRHGSLVM+LPD +  QIPTVIFGTV+G+IGVIASL
Sbjct: 942  GATDEERARMEVVGEYHIGEFVNRFRHGSLVMKLPDSDIGQIPTVIFGTVSGMIGVIASL 1001

Query: 364  PQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLNRR 543
            PQEQY FL KLQ +L KVIKGVGGLSHEQWRSF+NE++T +AK +LDGDLIESFLDL+R 
Sbjct: 1002 PQEQYAFLEKLQTSLRKVIKGVGGLSHEQWRSFNNEKRTAEAKGYLDGDLIESFLDLSRG 1061

Query: 544  RMEEI 558
            +MEEI
Sbjct: 1062 KMEEI 1066


>sp|Q5R649|DDB1_PONAB DNA damage-binding protein 1 OS=Pongo abelii
            GN=DDB1 PE=2 SV=1
          Length = 1140

 Score =  217 bits (552), Expect = 4e-56
 Identities = 111/187 (59%), Positives = 136/187 (72%), Gaps = 1/187 (0%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
            +VGDLM+S+ LL YKP EG  EE ARDFN NWMSAVEILDDD +LGAEN FNLF  +K+S
Sbjct: 922  LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 981

Query: 181  DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMR-LPDIEASQIPTVIFGTVNGVIGVIA 357
             A +DEER  L+ VG +HLGEFVN F HGSLVM+ L +       +V+FGTVNG+IG++ 
Sbjct: 982  AATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVT 1041

Query: 358  SLPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLN 537
            SL +  Y  L  +Q  L KVIK VG + H  WRSF  ERKT  A  F+DGDLIESFLD++
Sbjct: 1042 SLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDIS 1101

Query: 538  RRRMEEI 558
            R +M+E+
Sbjct: 1102 RPKMQEV 1108


>sp|Q3U1J4|DDB1_MOUSE DNA damage-binding protein 1 OS=Mus musculus
            GN=Ddb1 PE=1 SV=2
          Length = 1140

 Score =  217 bits (552), Expect = 4e-56
 Identities = 111/187 (59%), Positives = 136/187 (72%), Gaps = 1/187 (0%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
            +VGDLM+S+ LL YKP EG  EE ARDFN NWMSAVEILDDD +LGAEN FNLF  +K+S
Sbjct: 922  LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 981

Query: 181  DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMR-LPDIEASQIPTVIFGTVNGVIGVIA 357
             A +DEER  L+ VG +HLGEFVN F HGSLVM+ L +       +V+FGTVNG+IG++ 
Sbjct: 982  AATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGEASTPTQGSVLFGTVNGMIGLVT 1041

Query: 358  SLPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLN 537
            SL +  Y  L  +Q  L KVIK VG + H  WRSF  ERKT  A  F+DGDLIESFLD++
Sbjct: 1042 SLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDIS 1101

Query: 538  RRRMEEI 558
            R +M+E+
Sbjct: 1102 RPKMQEV 1108


>sp|Q16531|DDB1_HUMAN DNA damage-binding protein 1 OS=Homo sapiens
            GN=DDB1 PE=1 SV=1
          Length = 1140

 Score =  217 bits (552), Expect = 4e-56
 Identities = 111/187 (59%), Positives = 136/187 (72%), Gaps = 1/187 (0%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
            +VGDLM+S+ LL YKP EG  EE ARDFN NWMSAVEILDDD +LGAEN FNLF  +K+S
Sbjct: 922  LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 981

Query: 181  DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMR-LPDIEASQIPTVIFGTVNGVIGVIA 357
             A +DEER  L+ VG +HLGEFVN F HGSLVM+ L +       +V+FGTVNG+IG++ 
Sbjct: 982  AATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVT 1041

Query: 358  SLPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLN 537
            SL +  Y  L  +Q  L KVIK VG + H  WRSF  ERKT  A  F+DGDLIESFLD++
Sbjct: 1042 SLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDIS 1101

Query: 538  RRRMEEI 558
            R +M+E+
Sbjct: 1102 RPKMQEV 1108


>sp|P33194|DDB1_CERAE DNA damage-binding protein 1 OS=Cercopithecus
            aethiops GN=DDB1 PE=1 SV=1
          Length = 1140

 Score =  217 bits (552), Expect = 4e-56
 Identities = 111/187 (59%), Positives = 136/187 (72%), Gaps = 1/187 (0%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
            +VGDLM+S+ LL YKP EG  EE ARDFN NWMSAVEILDDD +LGAEN FNLF  +K+S
Sbjct: 922  LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 981

Query: 181  DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMR-LPDIEASQIPTVIFGTVNGVIGVIA 357
             A +DEER  L+ VG +HLGEFVN F HGSLVM+ L +       +V+FGTVNG+IG++ 
Sbjct: 982  AATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVT 1041

Query: 358  SLPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLN 537
            SL +  Y  L  +Q  L KVIK VG + H  WRSF  ERKT  A  F+DGDLIESFLD++
Sbjct: 1042 SLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDIS 1101

Query: 538  RRRMEEI 558
            R +M+E+
Sbjct: 1102 RPKMQEV 1108


>sp|A1A4K3|DDB1_BOVIN DNA damage-binding protein 1 OS=Bos taurus
            GN=DDB1 PE=2 SV=1
          Length = 1140

 Score =  217 bits (552), Expect = 4e-56
 Identities = 111/187 (59%), Positives = 136/187 (72%), Gaps = 1/187 (0%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
            +VGDLM+S+ LL YKP EG  EE ARDFN NWMSAVEILDDD +LGAEN FNLF  +K+S
Sbjct: 922  LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 981

Query: 181  DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMR-LPDIEASQIPTVIFGTVNGVIGVIA 357
             A +DEER  L+ VG +HLGEFVN F HGSLVM+ L +       +V+FGTVNG+IG++ 
Sbjct: 982  AATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVT 1041

Query: 358  SLPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLN 537
            SL +  Y  L  +Q  L KVIK VG + H  WRSF  ERKT  A  F+DGDLIESFLD++
Sbjct: 1042 SLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDIS 1101

Query: 538  RRRMEEI 558
            R +M+E+
Sbjct: 1102 RPKMQEV 1108


>sp|Q6P6Z0|DDB1_XENLA DNA damage-binding protein 1 OS=Xenopus laevis
            GN=ddb1 PE=2 SV=1
          Length = 1140

 Score =  216 bits (550), Expect = 6e-56
 Identities = 111/187 (59%), Positives = 136/187 (72%), Gaps = 1/187 (0%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
            +VGDLM+S+ LL YKP EG  EE ARDFN NWMSAVEILDDD +LGAEN FNLF  +K+S
Sbjct: 922  LVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 981

Query: 181  DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMR-LPDIEASQIPTVIFGTVNGVIGVIA 357
             A +DEER  L+ VG +HLGEFVN F HGSLVM+ L +       +V+FGTVNG+IG++ 
Sbjct: 982  AATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSPPTQGSVLFGTVNGMIGLVT 1041

Query: 358  SLPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLN 537
            SL +  Y  L  +Q  L KVIK VG + H  WRSF  ERKT  A  F+DGDLIESFLD++
Sbjct: 1042 SLSESWYNLLLDVQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDIS 1101

Query: 538  RRRMEEI 558
            R +M+E+
Sbjct: 1102 RPKMQEV 1108
tr_hit_id A9U358
Definition tr|A9U358|A9U358_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 186
Score (bit) 333.0
E-value 3.0e-90
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921667|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_G04.
         (558 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9U358|A9U358_PHYPA Predicted protein OS=Physcomitrella paten...   333   3e-90
tr|A9TCE5|A9TCE5_PHYPA Predicted protein OS=Physcomitrella paten...   329   5e-89
tr|A7Q1B3|A7Q1B3_VITVI Chromosome chr10 scaffold_43, whole genom...   325   8e-88
tr|B3H6I9|B3H6I9_ARATH Uncharacterized protein At4g05420.2 OS=Ar...   319   6e-86
tr|Q6L4S0|Q6L4S0_ORYSJ Os05g0592400 protein OS=Oryza sativa subs...   310   4e-83
tr|B8AXJ2|B8AXJ2_ORYSI Putative uncharacterized protein OS=Oryza...   310   4e-83
tr|Q9FS08|Q9FS08_ORYSJ UV-damaged DNA binding protein OS=Oryza s...   309   6e-83
tr|B7ZY61|B7ZY61_MAIZE Putative uncharacterized protein OS=Zea m...   304   2e-81
tr|A3B7E1|A3B7E1_ORYSJ Putative uncharacterized protein OS=Oryza...   302   9e-81
tr|A4S467|A4S467_OSTLU Predicted protein OS=Ostreococcus lucimar...   233   7e-60
tr|B6NP50|B6NP50_BRAFL Putative uncharacterized protein OS=Branc...   228   2e-58
tr|B6MGX7|B6MGX7_BRAFL Putative uncharacterized protein OS=Branc...   228   2e-58
tr|A9UM77|A9UM77_XENTR LOC100135265 protein OS=Xenopus tropicali...   219   1e-55
tr|A8E561|A8E561_DANRE Zgc:63840 protein OS=Danio rerio GN=zgc:6...   219   1e-55
tr|B7PIF3|B7PIF3_IXOSC DNA repair protein xp-E, putative OS=Ixod...   219   1e-55
tr|Q3ULS8|Q3ULS8_MOUSE Putative uncharacterized protein (Fragmen...   217   4e-55
tr|B4DZP5|B4DZP5_HUMAN cDNA FLJ51165, highly similar to DNA dama...   217   4e-55
tr|B4DG00|B4DG00_HUMAN cDNA FLJ52436, highly similar to DNA dama...   217   4e-55
tr|B4DSA8|B4DSA8_HUMAN cDNA FLJ51067, highly similar to DNA dama...   214   2e-54
tr|Q00ZH9|Q00ZH9_OSTTA Putative UV-damaged DNA binding factor (I...   209   6e-53
tr|A8IB70|A8IB70_CHLRE UV-damaged DNA binding complex subunit 1 ...   207   4e-52
tr|B0X4E5|B0X4E5_CULQU Putative uncharacterized protein OS=Culex...   204   2e-51
tr|Q4SHI8|Q4SHI8_TETNG Chromosome 5 SCAF14581, whole genome shot...   204   3e-51
tr|A7S0J1|A7S0J1_NEMVE Predicted protein OS=Nematostella vectens...   202   1e-50
tr|Q7QC66|Q7QC66_ANOGA AGAP002472-PA OS=Anopheles gambiae GN=AGA...   201   2e-50
tr|Q17I87|Q17I87_AEDAE DNA repair protein xp-e OS=Aedes aegypti ...   201   3e-50
tr|Q23865|Q23865_DICDI RepE OS=Dictyostelium discoideum GN=repE ...   194   2e-48
tr|B0M0P5|B0M0P5_DICDI UV-damaged DNA binding protein1 OS=Dictyo...   194   2e-48
tr|B3RLC6|B3RLC6_TRIAD Putative uncharacterized protein OS=Trich...   191   3e-47
tr|B4PPW4|B4PPW4_DROYA GE26244 OS=Drosophila yakuba GN=GE26244 P...   181   2e-44

>tr|A9U358|A9U358_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_101177 PE=4 SV=1
          Length = 1090

 Score =  333 bits (855), Expect = 3e-90
 Identities = 166/186 (89%), Positives = 178/186 (95%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
            +VGDLMKSISLLIYKPEEGAIEE ARD+NANWM+AVEILDDD YLGAEN+FNLFTVRKN+
Sbjct: 883  VVGDLMKSISLLIYKPEEGAIEERARDYNANWMTAVEILDDDTYLGAENSFNLFTVRKNN 942

Query: 181  DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMRLPDIEASQIPTVIFGTVNGVIGVIAS 360
            DAA+DEER +LEVVGEYHLGEFVNRFRHGSLVMRLPD EASQIPTVIFGTVNGVIGVIAS
Sbjct: 943  DAATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEASQIPTVIFGTVNGVIGVIAS 1002

Query: 361  LPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLNR 540
            LPQ+Q+ FL KLQQ LVKVIKGVGGLSHEQWRSFSNERKTVDA+NFLDGDLIESFLDL+R
Sbjct: 1003 LPQDQFLFLQKLQQALVKVIKGVGGLSHEQWRSFSNERKTVDARNFLDGDLIESFLDLSR 1062

Query: 541  RRMEEI 558
             +MEEI
Sbjct: 1063 NKMEEI 1068


>tr|A9TCE5|A9TCE5_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_220946 PE=4 SV=1
          Length = 1089

 Score =  329 bits (844), Expect = 5e-89
 Identities = 164/186 (88%), Positives = 177/186 (95%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
            +VGDLMKSISLLIYKPEEGAIEE ARD+NANWM+AVEILDDD YLGAEN+FNLFTVRKN+
Sbjct: 882  VVGDLMKSISLLIYKPEEGAIEERARDYNANWMTAVEILDDDTYLGAENSFNLFTVRKNN 941

Query: 181  DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMRLPDIEASQIPTVIFGTVNGVIGVIAS 360
            DAA+DEER +LEVVGEYHLGEFVNRFRHGSLVMRLPD EAS IPTVIFGTVNGVIGVIAS
Sbjct: 942  DAATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEASLIPTVIFGTVNGVIGVIAS 1001

Query: 361  LPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLNR 540
            LPQ+++ FL KLQQ LVKVIKGVGGLSHEQWRSFSNERKTVDA+NFLDGDLIESFLDL+R
Sbjct: 1002 LPQDKFLFLQKLQQALVKVIKGVGGLSHEQWRSFSNERKTVDARNFLDGDLIESFLDLSR 1061

Query: 541  RRMEEI 558
             +MEEI
Sbjct: 1062 NKMEEI 1067


>tr|A7Q1B3|A7Q1B3_VITVI Chromosome chr10 scaffold_43, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00028385001
            PE=4 SV=1
          Length = 1089

 Score =  325 bits (834), Expect = 8e-88
 Identities = 161/186 (86%), Positives = 173/186 (93%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
            +VGDLMKSISLLIYK EEGAIEE ARD+NANWMSAVEILDDDIYLGAENNFN+FTVRKNS
Sbjct: 882  VVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNIFTVRKNS 941

Query: 181  DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMRLPDIEASQIPTVIFGTVNGVIGVIAS 360
            + A+DEER +LEVVGEYHLGEFVNRFRHGSLVMRLPD +  QIPTVIFGTVNGVIGVIAS
Sbjct: 942  EGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS 1001

Query: 361  LPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLNR 540
            LP +QY FL KLQ NL KVIKGVGGLSHEQWRSF+NE+KTVDAKNFLDGDLIE+FLDLNR
Sbjct: 1002 LPHDQYVFLEKLQANLRKVIKGVGGLSHEQWRSFNNEKKTVDAKNFLDGDLIETFLDLNR 1061

Query: 541  RRMEEI 558
             RM+EI
Sbjct: 1062 TRMDEI 1067


>tr|B3H6I9|B3H6I9_ARATH Uncharacterized protein At4g05420.2
            OS=Arabidopsis thaliana GN=At4g05420 PE=4 SV=1
          Length = 1067

 Score =  319 bits (818), Expect = 6e-86
 Identities = 157/186 (84%), Positives = 173/186 (93%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
            +VGDLMKSISLL+YK EEGAIEE ARD+NANWMSAVEILDDDIYLGAENNFNL TV+KNS
Sbjct: 860  VVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVKKNS 919

Query: 181  DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMRLPDIEASQIPTVIFGTVNGVIGVIAS 360
            + A+DEER +LEVVGEYHLGEFVNRFRHGSLVMRLPD E  QIPTVIFGTVNGVIGVIAS
Sbjct: 920  EGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGVIAS 979

Query: 361  LPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLNR 540
            LPQEQYTFL KLQ +L KVIKGVGGLSHEQWRSF+NE++T +A+NFLDGDLIESFLDL+R
Sbjct: 980  LPQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSR 1039

Query: 541  RRMEEI 558
             +ME+I
Sbjct: 1040 NKMEDI 1045


>tr|Q6L4S0|Q6L4S0_ORYSJ Os05g0592400 protein OS=Oryza sativa subsp.
            japonica GN=P0663C08.8 PE=2 SV=1
          Length = 1090

 Score =  310 bits (793), Expect = 4e-83
 Identities = 149/186 (80%), Positives = 168/186 (90%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
            +VGDLMKSISLL+YK EE AIEE ARD+NANWMSAVE+LDD+IY+GAENN+N+FTVRKNS
Sbjct: 883  VVGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKNS 942

Query: 181  DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMRLPDIEASQIPTVIFGTVNGVIGVIAS 360
            DAA+DEER +LEVVGEYHLGEFVNR RHGSLVMRLPD E  QIPTVIFGT+NGVIG+IAS
Sbjct: 943  DAATDEERGRLEVVGEYHLGEFVNRLRHGSLVMRLPDSEMGQIPTVIFGTINGVIGIIAS 1002

Query: 361  LPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLNR 540
            LP EQY FL KLQ  LVK IKGVG LSHEQWRSF N++KT +A+NFLDGDLIESFLDL+R
Sbjct: 1003 LPHEQYVFLEKLQSTLVKFIKGVGNLSHEQWRSFHNDKKTSEARNFLDGDLIESFLDLSR 1062

Query: 541  RRMEEI 558
             +MEE+
Sbjct: 1063 NKMEEV 1068


>tr|B8AXJ2|B8AXJ2_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_21216 PE=4 SV=1
          Length = 1089

 Score =  310 bits (793), Expect = 4e-83
 Identities = 149/186 (80%), Positives = 168/186 (90%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
            +VGDLMKSISLL+YK EE AIEE ARD+NANWMSAVE+LDD+IY+GAENN+N+FTVRKNS
Sbjct: 882  VVGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKNS 941

Query: 181  DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMRLPDIEASQIPTVIFGTVNGVIGVIAS 360
            DAA+DEER +LEVVGEYHLGEFVNR RHGSLVMRLPD E  QIPTVIFGT+NGVIG+IAS
Sbjct: 942  DAATDEERGRLEVVGEYHLGEFVNRLRHGSLVMRLPDSEMGQIPTVIFGTINGVIGIIAS 1001

Query: 361  LPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLNR 540
            LP EQY FL KLQ  LVK IKGVG LSHEQWRSF N++KT +A+NFLDGDLIESFLDL+R
Sbjct: 1002 LPHEQYVFLEKLQSTLVKFIKGVGNLSHEQWRSFHNDKKTSEARNFLDGDLIESFLDLSR 1061

Query: 541  RRMEEI 558
             +MEE+
Sbjct: 1062 NKMEEV 1067


>tr|Q9FS08|Q9FS08_ORYSJ UV-damaged DNA binding protein OS=Oryza sativa
            subsp. japonica GN=OsUV-DDB PE=2 SV=1
          Length = 1090

 Score =  309 bits (792), Expect = 6e-83
 Identities = 149/186 (80%), Positives = 168/186 (90%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
            +VGDLMKSISLL+YK EE AIEE ARD+NANWMSAVE+LDD+IY+GAENN+N+FTVRKNS
Sbjct: 883  VVGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKNS 942

Query: 181  DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMRLPDIEASQIPTVIFGTVNGVIGVIAS 360
            DAA+DEER +LEVVGEYHLGEF NRFRHGSLVMRLPD E  QIPTVIFGT+NGVIG+IAS
Sbjct: 943  DAATDEERGRLEVVGEYHLGEFGNRFRHGSLVMRLPDSEMGQIPTVIFGTINGVIGIIAS 1002

Query: 361  LPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLNR 540
            LP EQY FL KLQ  LVK IKGVG LSHEQWRSF N++KT +A+NFLDGDLIESFLDL+R
Sbjct: 1003 LPHEQYVFLEKLQSTLVKFIKGVGNLSHEQWRSFHNDKKTSEARNFLDGDLIESFLDLSR 1062

Query: 541  RRMEEI 558
             +MEE+
Sbjct: 1063 NKMEEV 1068


>tr|B7ZY61|B7ZY61_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 416

 Score =  304 bits (778), Expect = 2e-81
 Identities = 145/186 (77%), Positives = 169/186 (90%)
 Frame = +1

Query: 1   MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 180
           +VGDLMKSISLL+YK EE AIEE ARD+NANWM+AVE+LDD++Y+GAEN++NLFTVRKNS
Sbjct: 209 VVGDLMKSISLLVYKHEESAIEERARDYNANWMTAVEMLDDEVYVGAENSYNLFTVRKNS 268

Query: 181 DAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMRLPDIEASQIPTVIFGTVNGVIGVIAS 360
           DAA+D+ER +LEVVGEYHLGEFVNRFRHGSLVMRLPD +  QIPTVIFGT+NGVIG+IAS
Sbjct: 269 DAATDDERARLEVVGEYHLGEFVNRFRHGSLVMRLPDSDIGQIPTVIFGTINGVIGIIAS 328

Query: 361 LPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDLIESFLDLNR 540
           LP +QY FL KLQ  LVK IKGVG LSHEQWRSF N++KT +A+NFLDGDLIESFLDL+R
Sbjct: 329 LPHDQYIFLEKLQSTLVKYIKGVGNLSHEQWRSFHNDKKTAEARNFLDGDLIESFLDLSR 388

Query: 541 RRMEEI 558
            +MEE+
Sbjct: 389 SKMEEV 394


>tr|A3B7E1|A3B7E1_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_018963 PE=4 SV=1
          Length = 2046

 Score =  302 bits (773), Expect = 9e-81
 Identities = 149/195 (76%), Positives = 168/195 (86%), Gaps = 9/195 (4%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYK---------PEEGAIEECARDFNANWMSAVEILDDDIYLGAENNF 153
            +VGDLMKSISLL+YK          EE AIEE ARD+NANWMSAVE+LDD+IY+GAENN+
Sbjct: 1102 VVGDLMKSISLLVYKLTFFFLFEQHEESAIEELARDYNANWMSAVEMLDDEIYIGAENNY 1161

Query: 154  NLFTVRKNSDAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMRLPDIEASQIPTVIFGTV 333
            N+FTVRKNSDAA+DEER +LEVVGEYHLGEFVNR RHGSLVMRLPD E  QIPTVIFGT+
Sbjct: 1162 NIFTVRKNSDAATDEERGRLEVVGEYHLGEFVNRLRHGSLVMRLPDSEMGQIPTVIFGTI 1221

Query: 334  NGVIGVIASLPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSNERKTVDAKNFLDGDL 513
            NGVIG+IASLP EQY FL KLQ  LVK IKGVG LSHEQWRSF N++KT +A+NFLDGDL
Sbjct: 1222 NGVIGIIASLPHEQYVFLEKLQSTLVKFIKGVGNLSHEQWRSFHNDKKTSEARNFLDGDL 1281

Query: 514  IESFLDLNRRRMEEI 558
            IESFLDL+R +MEE+
Sbjct: 1282 IESFLDLSRNKMEEV 1296


>tr|A4S467|A4S467_OSTLU Predicted protein OS=Ostreococcus lucimarinus
            (strain CCE9901) GN=OSTLU_26305 PE=4 SV=1
          Length = 1120

 Score =  233 bits (593), Expect = 7e-60
 Identities = 115/181 (63%), Positives = 148/181 (81%), Gaps = 3/181 (1%)
 Frame = +1

Query: 1    MVGDLMKSISLLIYKPEEGAIEECARDFNANWMSAVEILDDD-IYLGAENNFNLFTVRKN 177
            +VGDL+KS+SLL YKPEEGAI+E ARDFNANWM+AV +LDDD  YLGAEN+ NLFTV +N
Sbjct: 909  LVGDLLKSMSLLQYKPEEGAIDEIARDFNANWMTAVAMLDDDETYLGAENSLNLFTVARN 968

Query: 178  SDAASDEERNKLEVVGEYHLGEFVNRFRHGSLVMRLPDIEASQIPTVIFGTVNGVIGVIA 357
             +A +DEER++LE+ GEYHLGEFVN F  GSLVM L D ++ ++PT++FGT NGVIGV+A
Sbjct: 969  MNAMTDEERSRLEITGEYHLGEFVNVFSPGSLVMSLKDGDSLEVPTLLFGTGNGVIGVLA 1028

Query: 358  SLPQEQYTFLSKLQQNLVKVIKGVGGLSHEQWRSFSN--ERKTVDAKNFLDGDLIESFLD 531
            SLP++ Y F  +LQ ++ K I+GVGGL H +WRSF +   RK+  ++NF+DGDL+ESFLD
Sbjct: 1029 SLPKDAYDFAERLQTSMNKHIQGVGGLKHAEWRSFRHTLRRKSDPSRNFVDGDLVESFLD 1088

Query: 532  L 534
            L
Sbjct: 1089 L 1089