BP921668 |
Clone id |
YMU001_000152_G05 |
Library |
YMU01 |
Length |
565 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000152_G05. |
Accession |
BP921668 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCCTGATCTGTGTATCTTTANGAAGGGACCATATGTGAGTGTCTTCATCTGATGTGCATT AACTTTCGTATGAGCATAGCAAATTGACATCAAAGAAACTGCATCTGACGGTCTCTTCCC CTGATTGATCTCACTGCAAACTTTTGTCCAAGCATGTCAACAGCACCACCACCATTCCCT CTTGAAGATTGATCATGAATAGAGAGATGTTGATCAACATAAGCATCAAACAACATAGTT AATAAGGACAGCTGCTGAGCCAAAACCTCATTCTCGTGTGCTGGGGACACAAGCCGTATA GCACCTGAATTCACCTCTTTCTCCATGGCACGAAGATCATTGAAACTGAGCAAGCTAGCT GTAACTGGGTTGGAGGATTTCTTTGTCACACTTAAAACTCCACTCGGTGGAAAAGGGAGA GTTGGCACCATTCCTTCTGATATTTTATGGAGAACAAAGGAAGGTGGGCGAACAGGATAC TCGCAACAAAATTTCACCTGAGCTTCCAAGTCAATTGATTTCCCAATAGCACCCTCATCT CGTCTCAGCACGGCATTGAAAACAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q1ECW2 |
Definition |
sp|Q1ECW2|NPAS4_DANRE Neuronal PAS domain-containing protein 4 OS=Danio rerio |
Align length |
109 |
Score (bit) |
40.8 |
E-value |
0.005 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7NTX0 |
Definition |
tr|A7NTX0|A7NTX0_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
154 |
Score (bit) |
70.5 |
E-value |
6.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921668|Adiantum capillus-veneris mRNA, clone: YMU001_000152_G05. (565 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7NTX0|A7NTX0_VITVI Chromosome chr18 scaffold_1, whole genome... 70 6e-11 tr|Q94BS3|Q94BS3_ARATH Putative uncharacterized protein At5g4292... 70 8e-11 tr|Q00M79|Q00M79_SOYBN Expressed protein-like protein OS=Glycine... 68 3e-10 tr|A3ABP8|A3ABP8_ORYSJ Putative uncharacterized protein OS=Oryza... 64 4e-09 tr|A2X9Z9|A2X9Z9_ORYSI Putative uncharacterized protein OS=Oryza... 64 4e-09 tr|B4FE87|B4FE87_MAIZE Putative uncharacterized protein OS=Zea m... 64 6e-09 tr|Q9FMM6|Q9FMM6_ARATH Similarity to unknown protein OS=Arabidop... 62 3e-08 tr|Q5SVF9|Q5SVF9_MOUSE THO complex 5 OS=Mus musculus GN=Thoc5 PE... 39 0.25 tr|A6MLC6|A6MLC6_CALJA THO complex 5-like protein (Fragment) OS=... 38 0.43 tr|A7APE4|A7APE4_BABBO DNA repair protein rhp16, putative OS=Bab... 37 0.97 tr|B7G5E9|B7G5E9_PHATR Predicted protein OS=Phaeodactylum tricor... 35 3.7 tr|Q9LRX2|Q9LRX2_ARATH Similarity to synaptobrevin OS=Arabidopsi... 35 3.7 tr|Q0CUB5|Q0CUB5_ASPTN Putative uncharacterized protein OS=Asper... 35 3.7 tr|A8Q3I7|A8Q3I7_MALGO Putative uncharacterized protein OS=Malas... 35 3.7 tr|Q9PQJ9|Q9PQJ9_UREPA Conserved hypothetical OS=Ureaplasma parv... 34 4.8 tr|B1ZAQ6|B1ZAQ6_METPB Cysteinyl-tRNA synthetase OS=Methylobacte... 34 4.8 tr|B1AIT1|B1AIT1_UREP2 Putative uncharacterized protein OS=Ureap... 34 4.8 tr|B6PUY2|B6PUY2_BRAFL Putative uncharacterized protein (Fragmen... 34 4.8 tr|A7S8S8|A7S8S8_NEMVE Predicted protein OS=Nematostella vectens... 34 4.8 tr|Q4RSS3|Q4RSS3_TETNG Chromosome 12 SCAF14999, whole genome sho... 34 6.3 tr|A7IPJ0|A7IPJ0_XANP2 Cysteinyl-tRNA synthetase OS=Xanthobacter... 34 6.3 tr|B7KVN9|B7KVN9_METCH Cysteinyl-tRNA synthetase OS=Methylobacte... 34 6.3 tr|B2HZ71|B2HZ71_ACIBC Exoribonuclease R OS=Acinetobacter bauman... 33 8.2 tr|B0VQV5|B0VQV5_ACIBS Exoribonuclease R OS=Acinetobacter bauman... 33 8.2 tr|B0V6U0|B0V6U0_ACIBY Exoribonuclease R OS=Acinetobacter bauman... 33 8.2 tr|A3M948|A3M948_ACIBT Exoribonuclease R OS=Acinetobacter bauman... 33 8.2 tr|B7IA02|B7IA02_ACIBA Ribonuclease R OS=Acinetobacter baumannii... 33 8.2 tr|B7GW39|B7GW39_ACIBA Ribonuclease R OS=Acinetobacter baumannii... 33 8.2 tr|Q7RMN1|Q7RMN1_PLAYO Meloidogyne incognita COL-1-related OS=Pl... 33 8.2 tr|B6KQE6|B6KQE6_TOXGO Glycogen synthase, putative OS=Toxoplasma... 33 8.2
>tr|A7NTX0|A7NTX0_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014829001 PE=4 SV=1 Length = 812
Score = 70.5 bits (171), Expect = 6e-11 Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 2/154 (1%) Frame = -3
Query: 560 FNAVLRRDEGAIGKSIDLEAQVKFCCEYPVRPPSFVLHKISEGMVPTLPFPPSGVLSVTK 381 F VL R A +++ LEA++K EYP+RPP F + + +V+ Sbjct: 659 FCLVLTRKMDANERNVKLEAKIKISMEYPLRPPLFAI----------------SLYTVSP 702
Query: 380 KSSNPVTASLLSFNDLRAMEKEVNSGAIRLVSPAHENEVLAQQLSLLTMLFDAYVDQHLS 201 S+ +N+LRAME E+N +R++ EN +LA Q+ L MLFD ++D+ S Sbjct: 703 VESDSEIEGSEWYNELRAMEAEINLHILRMLPLDQENYILAHQVCCLAMLFDYHMDEASS 762
Query: 200 IHD--QSSRGNGGGAVDMLGQKFAVRSIRGRDRQ 105 + +S+ G + + RS+RGRDR+ Sbjct: 763 SSEKIKSTSVVDVGLCKPVTGRLLARSVRGRDRR 796
>tr|Q94BS3|Q94BS3_ARATH Putative uncharacterized protein At5g42920 OS=Arabidopsis thaliana GN=At5g42920 PE=2 SV=1 Length = 702
Score = 70.1 bits (170), Expect = 8e-11 Identities = 54/152 (35%), Positives = 74/152 (48%), Gaps = 5/152 (3%) Frame = -3
Query: 545 RRDEGAIGKSIDLEAQVKFCCEYPVRPPSFVLHKISEGMVPTLPFPPSGVLSVTKKSSNP 366 R+ +G GK LEA V+ EYP+RPP F L + SG + T +S + Sbjct: 556 RKTDG--GKLWKLEAMVQISMEYPLRPPLFSLSLHASSS--------SGNENGTNESDH- 604
Query: 365 VTASLLSFNDLRAMEKEVNSGAIRLVSPAHENEVLAQQLSLLTMLFDAYVDQHLSIHDQS 186 +N+LRAME EVN ++++ EN +L+ Q+ L MLFD YVD S Sbjct: 605 -------YNELRAMEAEVNLHMLKIIPSDQENYLLSHQIRCLAMLFDYYVDDP---SPDS 654
Query: 185 SRGNGGGAVDM-----LGQKFAVRSIRGRDRQ 105 RG VD+ + K VRS RGRD + Sbjct: 655 KRGTATTVVDVGLCKPVDGKLLVRSFRGRDHR 686
>tr|Q00M79|Q00M79_SOYBN Expressed protein-like protein OS=Glycine max PE=4 SV=1 Length = 817
Score = 68.2 bits (165), Expect = 3e-10 Identities = 45/136 (33%), Positives = 68/136 (50%) Frame = -3
Query: 560 FNAVLRRDEGAIGKSIDLEAQVKFCCEYPVRPPSFVLHKISEGMVPTLPFPPSGVLSVTK 381 F+ V+ R G +++LEA+++ EYP+RPP F+L +S Sbjct: 651 FHLVICRKIGTDESNLNLEAKIQISMEYPLRPPLFLLS-----------------ISCIS 693
Query: 380 KSSNPVTASLLSFNDLRAMEKEVNSGAIRLVSPAHENEVLAQQLSLLTMLFDAYVDQHLS 201 N L +N+LRAME EVN +++++ +N VLA Q+S L MLFD Y+D+ Sbjct: 694 SGENHDETGLEWYNELRAMEAEVNLHLLKMLTVNQKNFVLAHQVSCLAMLFDYYLDE--- 750
Query: 200 IHDQSSRGNGGGAVDM 153 S R N VD+ Sbjct: 751 ASPSSERTNCTSVVDV 766
>tr|A3ABP8|A3ABP8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_008220 PE=4 SV=1 Length = 773
Score = 64.3 bits (155), Expect = 4e-09 Identities = 46/140 (32%), Positives = 66/140 (47%) Frame = -3
Query: 524 GKSIDLEAQVKFCCEYPVRPPSFVLHKISEGMVPTLPFPPSGVLSVTKKSSNPVTASLLS 345 G + LEA++ EYPVRPP F L +S T +L Sbjct: 643 GPKVMLEAKIAISMEYPVRPPFFTLQLLSGK-----------------------TEALKW 679
Query: 344 FNDLRAMEKEVNSGAIRLVSPAHENEVLAQQLSLLTMLFDAYVDQHLSIHDQSSRGNGGG 165 NDLRAME EVN +++V ++E+ +L Q+ L MLFD + D+ +S + G Sbjct: 680 HNDLRAMEAEVNLHILQVVPSSYEDYILTHQILCLAMLFDMHFDEDHGKRKVTSVIDVGL 739
Query: 164 AVDMLGQKFAVRSIRGRDRQ 105 + G RS+RGRDR+ Sbjct: 740 CKPVSG-TMLTRSVRGRDRR 758
>tr|A2X9Z9|A2X9Z9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09070 PE=4 SV=1 Length = 802
Score = 64.3 bits (155), Expect = 4e-09 Identities = 46/140 (32%), Positives = 66/140 (47%) Frame = -3
Query: 524 GKSIDLEAQVKFCCEYPVRPPSFVLHKISEGMVPTLPFPPSGVLSVTKKSSNPVTASLLS 345 G + LEA++ EYPVRPP F L +S T +L Sbjct: 672 GPKVMLEAKIAISMEYPVRPPFFTLQLLSGK-----------------------TEALKW 708
Query: 344 FNDLRAMEKEVNSGAIRLVSPAHENEVLAQQLSLLTMLFDAYVDQHLSIHDQSSRGNGGG 165 NDLRAME EVN +++V ++E+ +L Q+ L MLFD + D+ +S + G Sbjct: 709 HNDLRAMEAEVNLHILQVVPSSYEDYILTHQILCLAMLFDMHFDEDHGKRKVTSVIDVGL 768
Query: 164 AVDMLGQKFAVRSIRGRDRQ 105 + G RS+RGRDR+ Sbjct: 769 CKPVSG-TMLTRSVRGRDRR 787
>tr|B4FE87|B4FE87_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 178
Score = 63.9 bits (154), Expect = 6e-09 Identities = 47/140 (33%), Positives = 66/140 (47%) Frame = -3
Query: 524 GKSIDLEAQVKFCCEYPVRPPSFVLHKISEGMVPTLPFPPSGVLSVTKKSSNPVTASLLS 345 G + LEA+VK EYP+RPP F L +SE + L Sbjct: 48 GLKVMLEAKVKISMEYPLRPPLFRLRLLSEK-----------------------SEILKW 84
Query: 344 FNDLRAMEKEVNSGAIRLVSPAHENEVLAQQLSLLTMLFDAYVDQHLSIHDQSSRGNGGG 165 NDLRAME EVN +R + ++E+ +L Q+ L MLFD + D+ +S + G Sbjct: 85 HNDLRAMEAEVNLHILRSIPLSYEDYILTHQVMCLAMLFDMHFDEENEKRKVTSVIDVGL 144
Query: 164 AVDMLGQKFAVRSIRGRDRQ 105 + G RS+RGRDR+ Sbjct: 145 CKPVSG-TMLTRSVRGRDRR 163
>tr|Q9FMM6|Q9FMM6_ARATH Similarity to unknown protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 824
Score = 61.6 bits (148), Expect = 3e-08 Identities = 46/131 (35%), Positives = 64/131 (48%) Frame = -3
Query: 545 RRDEGAIGKSIDLEAQVKFCCEYPVRPPSFVLHKISEGMVPTLPFPPSGVLSVTKKSSNP 366 R+ +G GK LEA V+ EYP+RPP F L + SG + T +S + Sbjct: 673 RKTDG--GKLWKLEAMVQISMEYPLRPPLFSLSLHASSS--------SGNENGTNESDH- 721
Query: 365 VTASLLSFNDLRAMEKEVNSGAIRLVSPAHENEVLAQQLSLLTMLFDAYVDQHLSIHDQS 186 +N+LRAME EVN ++++ EN +L+ Q+ L MLFD YVD S Sbjct: 722 -------YNELRAMEAEVNLHMLKIIPSDQENYLLSHQIRCLAMLFDYYVDDP---SPDS 771
Query: 185 SRGNGGGAVDM 153 RG VD+ Sbjct: 772 KRGTATTVVDV 782
>tr|Q5SVF9|Q5SVF9_MOUSE THO complex 5 OS=Mus musculus GN=Thoc5 PE=2 SV=1 Length = 635
Score = 38.5 bits (88), Expect = 0.25 Identities = 26/82 (31%), Positives = 38/82 (46%) Frame = -3
Query: 341 NDLRAMEKEVNSGAIRLVSPAHENEVLAQQLSLLTMLFDAYVDQHLSIHDQSSRGNGGGA 162 +++RAME EVN L P +++L QL L +L D Y++ HD S G Sbjct: 548 DNIRAMESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLDVYLE--TESHDDSFE----GP 601
Query: 161 VDMLGQKFAVRSIRGRDRQMQF 96 + +K +R RG R F Sbjct: 602 KEFPQEKMCLRLFRGPSRMKPF 623
>tr|A6MLC6|A6MLC6_CALJA THO complex 5-like protein (Fragment) OS=Callithrix jacchus PE=2 SV=1 Length = 197
Score = 37.7 bits (86), Expect = 0.43 Identities = 26/82 (31%), Positives = 38/82 (46%) Frame = -3
Query: 341 NDLRAMEKEVNSGAIRLVSPAHENEVLAQQLSLLTMLFDAYVDQHLSIHDQSSRGNGGGA 162 +++RAME EVN L P +++L QL L +L D Y++ HD S G Sbjct: 110 DNIRAMESEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLE--TESHDDSVE----GP 163
Query: 161 VDMLGQKFAVRSIRGRDRQMQF 96 + +K +R RG R F Sbjct: 164 KEFPQEKMCLRLFRGPSRMKPF 185
>tr|A7APE4|A7APE4_BABBO DNA repair protein rhp16, putative OS=Babesia bovis GN=BBOV_III008700 PE=4 SV=1 Length = 1289
Score = 36.6 bits (83), Expect = 0.97 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 6/113 (5%) Frame = -3
Query: 521 KSIDLEAQVKFCC------EYPVRPPSFVLHKISEGMVPTLPFPPSGVLSVTKKSSNPVT 360 K ID V +C E P+ P +H+ S+ ++P LPF GV + ++ PV Sbjct: 105 KPIDANFDVTYCNSVEPEKEVPILEP---VHQPSQLLIPLLPFQKDGVAWMQQQEMGPVR 161
Query: 359 ASLLSFNDLRAMEKEVNSGAIRLVSPAHENEVLAQQLSLLTMLFDAYVDQHLS 201 +L+ D M K + + + +V+ +NE LA L+ T D L+ Sbjct: 162 GGILA--DEMGMGKTIQTIGLLVVA---KNEALANDLANPTATSAPVTDHKLA 209
|