BP921669
Clone id YMU001_000152_G06
Library
Length 579
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000152_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGTGGGCTTGCAACGGATATGGTGCAAGATAGCAAGGATGCATACAAACGAGTGCAGTGG
TCTATTGTGGAGTAAGAATAGCAAGCAACTGTAGCAAATGAGGATAGTAGATTGAGCCGA
GCAGAGCTTCAAACAGGAGACAGCCAAAGGCTATGCAGATTACAGAAACGGGTAGCTATA
ATTGGGGCTCATTGGCGCAACATGCAAGTGAGGATCAGCTGCATCGAGCTTTCTTTGTAT
AGATTGTGCCCCCCCCTCGTGCGCTGATGAGCACCGCGCAGGGGTTTGGAGGACAGAGTA
GCGTGAAGCGGGAGCTTTCAATCCCTTTGGAGTCTAGGTCCACTGCCGCTCTTCCGGCAT
TGATGGGCTTTAAGAGCGTGACAGCAAGGCAGGGAGTACCGAAGGAAAGCTGAGACCAGC
TGGCCGTAGGCACGGTGTTGAAGTCCCCGGGCCTACCTCCAAAAGCATGCGAAGCGAGGG
TGTTGACGGGCTGTGAAGTTGGACATAGCAGCTATAGCGAATGCAGGTGGCAATCGAGAT
TTCTGTCAAGTGTTGGAGATGGGGATGGGTAATCGGTGT
■■Homology search results ■■ -
sp_hit_id Q5JPB2
Definition sp|Q5JPB2|ZN831_HUMAN Zinc finger protein 831 OS=Homo sapiens
Align length 98
Score (bit) 33.1
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921669|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_G06.
(579 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5JPB2|ZN831_HUMAN Zinc finger protein 831 OS=Homo sapiens GN... 33 1.0
sp|A1JK23|FADI_YERE8 3-ketoacyl-CoA thiolase OS=Yersinia enteroc... 33 1.3
sp|Q668V0|FADI_YERPS 3-ketoacyl-CoA thiolase OS=Yersinia pseudot... 32 2.3
sp|A4TM83|FADI_YERPP 3-ketoacyl-CoA thiolase OS=Yersinia pestis ... 32 2.3
sp|Q1CHK1|FADI_YERPN 3-ketoacyl-CoA thiolase OS=Yersinia pestis ... 32 2.3
sp|Q8ZD46|FADI_YERPE 3-ketoacyl-CoA thiolase OS=Yersinia pestis ... 32 2.3
sp|Q1C659|FADI_YERPA 3-ketoacyl-CoA thiolase OS=Yersinia pestis ... 32 2.3
sp|A7FGK0|FADI_YERP3 3-ketoacyl-CoA thiolase OS=Yersinia pseudot... 32 2.3
sp|Q7N287|FADI_PHOLL 3-ketoacyl-CoA thiolase OS=Photorhabdus lum... 32 2.3
sp|Q91009|NTRK1_CHICK High affinity nerve growth factor receptor... 31 5.1
sp|Q03352|ANT3_CHICK Antithrombin-III (Fragment) OS=Gallus gallu... 30 6.7

>sp|Q5JPB2|ZN831_HUMAN Zinc finger protein 831 OS=Homo sapiens
GN=ZNF831 PE=2 SV=4
Length = 1677

Score = 33.1 bits (74), Expect = 1.0
Identities = 24/98 (24%), Positives = 42/98 (42%)
Frame = +2

Query: 251 PPSCADEHRAGVWRTE*REAGAFNPFGV*VHCRSSGIDGL*ERDSKAGSTEGKLRPAGRR 430
P S + H+ G +T G + + V C S G DG + S + + + P+
Sbjct: 1574 PSSASSHHKEGRHKTFFPSRGQYGCGEMTVPCPSLGSDGRKRQVSGLITRKDSVVPSKPE 1633

Query: 431 HGVEVPGPTSKSMRSEGVDGL*SWT*QL*RMQVAIEIS 544
+E+P SKS++ ++G+ R Q +E S
Sbjct: 1634 QPIEIPEAPSKSLKKRSLEGM--------RKQTRVEFS 1663


>sp|A1JK23|FADI_YERE8 3-ketoacyl-CoA thiolase OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=fadI PE=3 SV=1
Length = 436

Score = 32.7 bits (73), Expect = 1.3
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Frame = +3

Query: 288 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTVLKSP 449
G + ++ L P ++TA +PA+ K V AR GV E DQL G V++ P
Sbjct: 12 GDRIAIVSGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGVAPELIDQLVFGQVVQMP 71

Query: 450 GLPPKACEARVLTGCEVGHSSYSECR 527
P A E + TG V +YS R
Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97


>sp|Q668V0|FADI_YERPS 3-ketoacyl-CoA thiolase OS=Yersinia
pseudotuberculosis GN=fadI PE=3 SV=1
Length = 436

Score = 32.0 bits (71), Expect = 2.3
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +3

Query: 288 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTVLKSP 449
G + + L P ++TA +PA+ K V AR G+ E DQL G V++ P
Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71

Query: 450 GLPPKACEARVLTGCEVGHSSYSECR 527
P A E + TG V +YS R
Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97


>sp|A4TM83|FADI_YERPP 3-ketoacyl-CoA thiolase OS=Yersinia pestis
(strain Pestoides F) GN=fadI PE=3 SV=1
Length = 436

Score = 32.0 bits (71), Expect = 2.3
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +3

Query: 288 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTVLKSP 449
G + + L P ++TA +PA+ K V AR G+ E DQL G V++ P
Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71

Query: 450 GLPPKACEARVLTGCEVGHSSYSECR 527
P A E + TG V +YS R
Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97


>sp|Q1CHK1|FADI_YERPN 3-ketoacyl-CoA thiolase OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=fadI PE=3 SV=1
Length = 436

Score = 32.0 bits (71), Expect = 2.3
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +3

Query: 288 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTVLKSP 449
G + + L P ++TA +PA+ K V AR G+ E DQL G V++ P
Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71

Query: 450 GLPPKACEARVLTGCEVGHSSYSECR 527
P A E + TG V +YS R
Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97


>sp|Q8ZD46|FADI_YERPE 3-ketoacyl-CoA thiolase OS=Yersinia pestis
GN=fadI PE=3 SV=1
Length = 436

Score = 32.0 bits (71), Expect = 2.3
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +3

Query: 288 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTVLKSP 449
G + + L P ++TA +PA+ K V AR G+ E DQL G V++ P
Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71

Query: 450 GLPPKACEARVLTGCEVGHSSYSECR 527
P A E + TG V +YS R
Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97


>sp|Q1C659|FADI_YERPA 3-ketoacyl-CoA thiolase OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=fadI PE=3 SV=1
Length = 436

Score = 32.0 bits (71), Expect = 2.3
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +3

Query: 288 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTVLKSP 449
G + + L P ++TA +PA+ K V AR G+ E DQL G V++ P
Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71

Query: 450 GLPPKACEARVLTGCEVGHSSYSECR 527
P A E + TG V +YS R
Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97


>sp|A7FGK0|FADI_YERP3 3-ketoacyl-CoA thiolase OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=fadI PE=3 SV=1
Length = 436

Score = 32.0 bits (71), Expect = 2.3
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +3

Query: 288 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTVLKSP 449
G + + L P ++TA +PA+ K V AR G+ E DQL G V++ P
Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71

Query: 450 GLPPKACEARVLTGCEVGHSSYSECR 527
P A E + TG V +YS R
Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97


>sp|Q7N287|FADI_PHOLL 3-ketoacyl-CoA thiolase OS=Photorhabdus
luminescens subsp. laumondii GN=fadI PE=3 SV=1
Length = 436

Score = 32.0 bits (71), Expect = 2.3
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +3

Query: 288 GGQSSVKRELSIPLESRSTAA--LPALMGFKSVTA----RQGVPKES*DQLAVGTVLKSP 449
G + ++ L IP ++T+ +PA+ KSV + R G+ E DQL G V++ P
Sbjct: 12 GDRIAIVSGLRIPFAKQATSYHDIPAVDLGKSVVSELVTRSGLLPEKIDQLVFGQVVQMP 71

Query: 450 GLPPKACEARVLTGCEVGHSSYSECR 527
P A E + G V +YS R
Sbjct: 72 EAPNIAREIVLGAGLSVSTDAYSVSR 97


>sp|Q91009|NTRK1_CHICK High affinity nerve growth factor receptor
(Fragment) OS=Gallus gallus GN=NTRK1 PE=2 SV=1
Length = 778

Score = 30.8 bits (68), Expect = 5.1
Identities = 22/49 (44%), Positives = 25/49 (51%)
Frame = -2

Query: 404 LRYSLPCCHALKAHQCRKSGSGPRLQRD*KLPLHATLSSKPLRGAHQRT 258
LR LP CHAL AH CR S R+ PL + S L GAH+ T
Sbjct: 4 LRLPLPLCHALAAH-CRCPASHTLRCRE---PLTVSSLSALLLGAHRPT 48


tr_hit_id A1A2W7
Definition tr|A1A2W7|A1A2W7_BIFAA Putative uncharacterized protein OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083)
Align length 30
Score (bit) 34.3
E-value 5.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921669|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_G06.
(579 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A1A2W7|A1A2W7_BIFAA Putative uncharacterized protein OS=Bifid... 34 5.1
tr|A4HKP2|A4HKP2_LEIBR Putative uncharacterized protein OS=Leish... 34 5.1
tr|B4LBY0|B4LBY0_DROVI GJ13442 OS=Drosophila virilis GN=GJ13442 ... 33 8.7
tr|Q7NHA8|Q7NHA8_GLOVI ATP-dependent DNA helicase OS=Gloeobacter... 33 8.8

>tr|A1A2W7|A1A2W7_BIFAA Putative uncharacterized protein
OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM
20083) GN=BAD_1269 PE=4 SV=1
Length = 167

Score = 34.3 bits (77), Expect = 5.1
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2

Query: 356 GIDGL*ERDSKAGSTEGKLRPAGRRHGVEV 445
G DG+ R +G+ G+LRPAG RHG+ +
Sbjct: 69 GADGMMRRPFPSGTVGGELRPAGTRHGIRL 98


>tr|A4HKP2|A4HKP2_LEIBR Putative uncharacterized protein
OS=Leishmania braziliensis GN=LbrM32_V2.2750 PE=4 SV=1
Length = 912

Score = 34.3 bits (77), Expect = 5.1
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +3

Query: 156 QITETGSYNWGSLAQHASEDQLHRAFFV*IVPPPRALMSTAQGFGGQSSVKRELSIPLES 335
++ + N G+LAQ A A V +V PPRA ST GF G S R+++ ++
Sbjct: 582 EVDSSKGENVGALAQEA-------ALMVPLVMPPRAPYSTPMGFCGTSVPLRDVASEMQQ 634

Query: 336 RST 344
R T
Sbjct: 635 RGT 637


>tr|B4LBY0|B4LBY0_DROVI GJ13442 OS=Drosophila virilis GN=GJ13442 PE=4
SV=1
Length = 3612

Score = 33.5 bits (75), Expect = 8.7
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Frame = -2

Query: 440 QHRAYGQLVS------AFLRYSLPCCHALKAHQCRKSGSGPRL 330
Q R YG+ S A RYSLP CH+L H R PRL
Sbjct: 3440 QRRGYGRTRSPMAPRFAHKRYSLPSCHSLDIHLDRLHAQAPRL 3482


>tr|Q7NHA8|Q7NHA8_GLOVI ATP-dependent DNA helicase OS=Gloeobacter
violaceus GN=recQ PE=4 SV=1
Length = 746

Score = 33.5 bits (75), Expect = 8.8
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -1

Query: 357 PEERQWT*TPKGLKAPASRYSVLQTPARCSSAHEGGAQSIQRKLDAADPHLHVAPMS-PN 181
PE RQ L A R++ L T A ++A E Q I +L DPH+H+A PN
Sbjct: 169 PEYRQ-------LAAVRERFAALPTLALTATATERVRQDILVQLKLRDPHIHIASFDRPN 221

Query: 180 YSYPFL 163
Y L
Sbjct: 222 LHYAVL 227