BP921669 |
Clone id |
YMU001_000152_G06 |
Library |
YMU01 |
Length |
579 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000152_G06. |
Accession |
BP921669 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3975Contig1 |
Sequence |
GGTGGGCTTGCAACGGATATGGTGCAAGATAGCAAGGATGCATACAAACGAGTGCAGTGG TCTATTGTGGAGTAAGAATAGCAAGCAACTGTAGCAAATGAGGATAGTAGATTGAGCCGA GCAGAGCTTCAAACAGGAGACAGCCAAAGGCTATGCAGATTACAGAAACGGGTAGCTATA ATTGGGGCTCATTGGCGCAACATGCAAGTGAGGATCAGCTGCATCGAGCTTTCTTTGTAT AGATTGTGCCCCCCCCTCGTGCGCTGATGAGCACCGCGCAGGGGTTTGGAGGACAGAGTA GCGTGAAGCGGGAGCTTTCAATCCCTTTGGAGTCTAGGTCCACTGCCGCTCTTCCGGCAT TGATGGGCTTTAAGAGCGTGACAGCAAGGCAGGGAGTACCGAAGGAAAGCTGAGACCAGC TGGCCGTAGGCACGGTGTTGAAGTCCCCGGGCCTACCTCCAAAAGCATGCGAAGCGAGGG TGTTGACGGGCTGTGAAGTTGGACATAGCAGCTATAGCGAATGCAGGTGGCAATCGAGAT TTCTGTCAAGTGTTGGAGATGGGGATGGGTAATCGGTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5JPB2 |
Definition |
sp|Q5JPB2|ZN831_HUMAN Zinc finger protein 831 OS=Homo sapiens |
Align length |
98 |
Score (bit) |
33.1 |
E-value |
1.0 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921669|Adiantum capillus-veneris mRNA, clone: YMU001_000152_G06. (579 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q5JPB2|ZN831_HUMAN Zinc finger protein 831 OS=Homo sapiens GN... 33 1.0 sp|A1JK23|FADI_YERE8 3-ketoacyl-CoA thiolase OS=Yersinia enteroc... 33 1.3 sp|Q668V0|FADI_YERPS 3-ketoacyl-CoA thiolase OS=Yersinia pseudot... 32 2.3 sp|A4TM83|FADI_YERPP 3-ketoacyl-CoA thiolase OS=Yersinia pestis ... 32 2.3 sp|Q1CHK1|FADI_YERPN 3-ketoacyl-CoA thiolase OS=Yersinia pestis ... 32 2.3 sp|Q8ZD46|FADI_YERPE 3-ketoacyl-CoA thiolase OS=Yersinia pestis ... 32 2.3 sp|Q1C659|FADI_YERPA 3-ketoacyl-CoA thiolase OS=Yersinia pestis ... 32 2.3 sp|A7FGK0|FADI_YERP3 3-ketoacyl-CoA thiolase OS=Yersinia pseudot... 32 2.3 sp|Q7N287|FADI_PHOLL 3-ketoacyl-CoA thiolase OS=Photorhabdus lum... 32 2.3 sp|Q91009|NTRK1_CHICK High affinity nerve growth factor receptor... 31 5.1 sp|Q03352|ANT3_CHICK Antithrombin-III (Fragment) OS=Gallus gallu... 30 6.7
>sp|Q5JPB2|ZN831_HUMAN Zinc finger protein 831 OS=Homo sapiens GN=ZNF831 PE=2 SV=4 Length = 1677
Score = 33.1 bits (74), Expect = 1.0 Identities = 24/98 (24%), Positives = 42/98 (42%) Frame = +2
Query: 251 PPSCADEHRAGVWRTE*REAGAFNPFGV*VHCRSSGIDGL*ERDSKAGSTEGKLRPAGRR 430 P S + H+ G +T G + + V C S G DG + S + + + P+ Sbjct: 1574 PSSASSHHKEGRHKTFFPSRGQYGCGEMTVPCPSLGSDGRKRQVSGLITRKDSVVPSKPE 1633
Query: 431 HGVEVPGPTSKSMRSEGVDGL*SWT*QL*RMQVAIEIS 544 +E+P SKS++ ++G+ R Q +E S Sbjct: 1634 QPIEIPEAPSKSLKKRSLEGM--------RKQTRVEFS 1663
>sp|A1JK23|FADI_YERE8 3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadI PE=3 SV=1 Length = 436
Score = 32.7 bits (73), Expect = 1.3 Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Frame = +3
Query: 288 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTVLKSP 449 G + ++ L P ++TA +PA+ K V AR GV E DQL G V++ P Sbjct: 12 GDRIAIVSGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGVAPELIDQLVFGQVVQMP 71
Query: 450 GLPPKACEARVLTGCEVGHSSYSECR 527 P A E + TG V +YS R Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97
>sp|Q668V0|FADI_YERPS 3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis GN=fadI PE=3 SV=1 Length = 436
Score = 32.0 bits (71), Expect = 2.3 Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Frame = +3
Query: 288 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTVLKSP 449 G + + L P ++TA +PA+ K V AR G+ E DQL G V++ P Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71
Query: 450 GLPPKACEARVLTGCEVGHSSYSECR 527 P A E + TG V +YS R Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97
>sp|A4TM83|FADI_YERPP 3-ketoacyl-CoA thiolase OS=Yersinia pestis (strain Pestoides F) GN=fadI PE=3 SV=1 Length = 436
Score = 32.0 bits (71), Expect = 2.3 Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Frame = +3
Query: 288 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTVLKSP 449 G + + L P ++TA +PA+ K V AR G+ E DQL G V++ P Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71
Query: 450 GLPPKACEARVLTGCEVGHSSYSECR 527 P A E + TG V +YS R Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97
>sp|Q1CHK1|FADI_YERPN 3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadI PE=3 SV=1 Length = 436
Score = 32.0 bits (71), Expect = 2.3 Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Frame = +3
Query: 288 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTVLKSP 449 G + + L P ++TA +PA+ K V AR G+ E DQL G V++ P Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71
Query: 450 GLPPKACEARVLTGCEVGHSSYSECR 527 P A E + TG V +YS R Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97
>sp|Q8ZD46|FADI_YERPE 3-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadI PE=3 SV=1 Length = 436
Score = 32.0 bits (71), Expect = 2.3 Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Frame = +3
Query: 288 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTVLKSP 449 G + + L P ++TA +PA+ K V AR G+ E DQL G V++ P Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71
Query: 450 GLPPKACEARVLTGCEVGHSSYSECR 527 P A E + TG V +YS R Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97
>sp|Q1C659|FADI_YERPA 3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadI PE=3 SV=1 Length = 436
Score = 32.0 bits (71), Expect = 2.3 Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Frame = +3
Query: 288 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTVLKSP 449 G + + L P ++TA +PA+ K V AR G+ E DQL G V++ P Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71
Query: 450 GLPPKACEARVLTGCEVGHSSYSECR 527 P A E + TG V +YS R Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97
>sp|A7FGK0|FADI_YERP3 3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadI PE=3 SV=1 Length = 436
Score = 32.0 bits (71), Expect = 2.3 Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Frame = +3
Query: 288 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTVLKSP 449 G + + L P ++TA +PA+ K V AR G+ E DQL G V++ P Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71
Query: 450 GLPPKACEARVLTGCEVGHSSYSECR 527 P A E + TG V +YS R Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97
>sp|Q7N287|FADI_PHOLL 3-ketoacyl-CoA thiolase OS=Photorhabdus luminescens subsp. laumondii GN=fadI PE=3 SV=1 Length = 436
Score = 32.0 bits (71), Expect = 2.3 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 6/86 (6%) Frame = +3
Query: 288 GGQSSVKRELSIPLESRSTAA--LPALMGFKSVTA----RQGVPKES*DQLAVGTVLKSP 449 G + ++ L IP ++T+ +PA+ KSV + R G+ E DQL G V++ P Sbjct: 12 GDRIAIVSGLRIPFAKQATSYHDIPAVDLGKSVVSELVTRSGLLPEKIDQLVFGQVVQMP 71
Query: 450 GLPPKACEARVLTGCEVGHSSYSECR 527 P A E + G V +YS R Sbjct: 72 EAPNIAREIVLGAGLSVSTDAYSVSR 97
>sp|Q91009|NTRK1_CHICK High affinity nerve growth factor receptor (Fragment) OS=Gallus gallus GN=NTRK1 PE=2 SV=1 Length = 778
Score = 30.8 bits (68), Expect = 5.1 Identities = 22/49 (44%), Positives = 25/49 (51%) Frame = -2
Query: 404 LRYSLPCCHALKAHQCRKSGSGPRLQRD*KLPLHATLSSKPLRGAHQRT 258 LR LP CHAL AH CR S R+ PL + S L GAH+ T Sbjct: 4 LRLPLPLCHALAAH-CRCPASHTLRCRE---PLTVSSLSALLLGAHRPT 48
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A1A2W7 |
Definition |
tr|A1A2W7|A1A2W7_BIFAA Putative uncharacterized protein OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) |
Align length |
30 |
Score (bit) |
34.3 |
E-value |
5.1 |
Report |
|