BP921674
Clone id YMU001_000152_G11
Library
Length 518
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000152_G11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAACTCATGAGCAGGAAGGCTTTTTATGGCTGCTTTTGGCCTTTAGCCTGGCCAAGGTCA
CGGTGGACGTTGAACTCCTCACTTAGTTTGGATGTTGGCAAGATTCATGGAATCCACTTT
CTATCAGGATCCTATGCCCCTGTGGTTTGTTCAGTTTTCTTCACCGCCAGGATCCTAGTC
TTCCATAGGTAGCGCCTTGTTTCTTCCGTTTATCTCCATCGGCTGTGGGAGCAATTATAC
CTATGATTGCTTTGTAGAAGTTGTGGGCTTGATGACAGGTTGATGTGTGCAATTCAGCCA
GTTCACTTACAACCTGGTTTGGGGACTGCTTTGTATTAGGCTTGGCCACCGCCAAAACAC
GAGCAGTAAATGCTTGGAAAGGGATGGTGCTCCTTTTACCAATGCAGATATAGCTCCATC
TTTCGCTTGTATTTATTACATGCAGGCTTGTCAGCACATCCTTGCTGTTGCTAATGCTCA
AGTCCAGCATTTTTCATCCTGTTGAACTTTGATAAAAA
■■Homology search results ■■ -
sp_hit_id Q3IF23
Definition sp|Q3IF23|RL23_PSEHT 50S ribosomal protein L23 OS=Pseudoalteromonas haloplanktis (strain TAC 125)
Align length 80
Score (bit) 29.6
E-value 8.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921674|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_G11.
(518 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3IF23|RL23_PSEHT 50S ribosomal protein L23 OS=Pseudoalteromo... 30 8.8

>sp|Q3IF23|RL23_PSEHT 50S ribosomal protein L23 OS=Pseudoalteromonas
haloplanktis (strain TAC 125) GN=rplW PE=3 SV=1
Length = 100

Score = 29.6 bits (65), Expect = 8.8
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = -2

Query: 403 IGKRSTIPFQAFTARVLAVAKPNTKQSPNQVVSELAELHTSTCHQAHNFYKAIIGIIAPT 224
I ++STI + V VAK +TK V +L E+ + G+
Sbjct: 16 ISEKSTIAAEENNTIVFKVAKDSTKAEVKAAVEKLFEVE-------------VTGVRTLN 62

Query: 223 ADGDKRKKQGATYGRLGSWR 164
G K K+ GA +GR W+
Sbjct: 63 VKG-KTKRTGARFGRRNDWK 81


tr_hit_id Q1Z592
Definition tr|Q1Z592|Q1Z592_PHOPR Putative phosphate ABC transporter, permease protein OS=Photobacterium profundum 3TCK
Align length 72
Score (bit) 34.7
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921674|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_G11.
(518 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1Z592|Q1Z592_PHOPR Putative phosphate ABC transporter, perme... 35 2.9
tr|Q1ZSI8|Q1ZSI8_9VIBR Putative phosphate ABC transporter, perme... 34 5.0

>tr|Q1Z592|Q1Z592_PHOPR Putative phosphate ABC transporter, permease
protein OS=Photobacterium profundum 3TCK GN=P3TCK_17882
PE=3 SV=1
Length = 296

Score = 34.7 bits (78), Expect = 2.9
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +1

Query: 37 WPLAWPRSRWTLNSSLSLDVGKIHG----IHFLSGSYAPVVCSVFFTARILVFHR*RLVS 204
W L P + + +S+ L VG++ G + +G A + SVF + R L H +L
Sbjct: 196 WRLILPSAMPGIVTSIILSVGRVIGESAPVFMTAGMVARIPESVFDSGRTLTVHLYKLTQ 255

Query: 205 SVYLHRLWEQLY 240
+Y W+Q Y
Sbjct: 256 ELYTIHEWQQAY 267


>tr|Q1ZSI8|Q1ZSI8_9VIBR Putative phosphate ABC transporter, permease
protein OS=Vibrio angustum S14 GN=VAS14_04698 PE=3 SV=1
Length = 295

Score = 33.9 bits (76), Expect = 5.0
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +1

Query: 37 WPLAWPRSRWTLNSSLSLDVGKIHG----IHFLSGSYAPVVCSVFFTARILVFHR*RLVS 204
W L P + + +S+ L VG++ G + +G A + SVF + R L H +L
Sbjct: 195 WRLILPSAMPGIVTSIILSVGRVIGESAPVFMTAGMVARIPESVFDSGRTLTVHLYKLTQ 254

Query: 205 SVYLHRLWEQLY 240
+Y W Q Y
Sbjct: 255 ELYTVHEWNQAY 266