BP921677 [AcEST]

BP921677
Clone id	YMU001_000152_H02
Library	YMU01
Length	474
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000152_H02.
Accession	BP921677
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	GGGAGAAGGGGGTTGCCTTTACTATACAATAGCTTATAATTATGGGAATATGCAGTCATT TTTGTCTCACAAATGGCCACAGTTGAAGTTTGGGCCTGAGTCTGACAACTACCATGCTGA GAACATTCAAATGTGGGAGCTACTTAGGCTACATGTTGCAATGTCAATATGTTCTCTTTG GGTTTTCCTCCTACTTGCTTCTTCATTGTCTTCCTTAAGGGAGTAAGTTTTGAACAATGG CTAAGGTGGGATAAAAAAATACCATTGTCCACCTACATCTACATACCAAGGGTATACAAT TTCCAAGTTAAAGACTTTGAGCATTACCATGGCTAGCCTTTAAAGATTAAGACTTGATAT TCTGATTTTCAATCATACCATGCGGCTTTCTATAGAAACAATTTAATAAATAAAGAGGAT CTTTGATTGATGATTGCCAGCTATAAATATGCTTGCCATTTTAGATCAATAGTG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q57959
Definition	sp\|Q57959\|SYK_METJA Lysyl-tRNA synthetase OS=Methanocaldococcus jannaschii
Align length	60
Score (bit)	29.3
E-value	9.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP921677\|Adiantum capillus-veneris mRNA, clone: YMU001_000152_H02. (474 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q57959\|SYK_METJA Lysyl-tRNA synthetase OS=Methanocaldococcus ... 29 9.4 >sp\|Q57959\|SYK_METJA Lysyl-tRNA synthetase OS=Methanocaldococcus jannaschii GN=lysS PE=3 SV=2 Length = 530 Score = 29.3 bits (64), Expect = 9.4 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Frame = +1 Query: 271 TYIYIPRVYNFQVKDFEHYHGPL-KIKTYSDFQSYHAAFYRNNLINKEDL*LMIASYK 447 TY + ++Y F K+FE Y G PL +I +SY F R L + +DL + + +Y+ Sbjct: 65 TYDPLRKLYPFLPKEFEQYIGMPLSEIPCPEGCCESYAEHFLRPYLESLDDLGVELTTYR 124
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q3EBY1
Definition	tr\|Q3EBY1\|Q3EBY1_ARATH Uncharacterized protein At2g18460.2 OS=Arabidopsis thaliana
Align length	53
Score (bit)	33.5
E-value	5.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP921677\|Adiantum capillus-veneris mRNA, clone: YMU001_000152_H02. (474 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q3EBY1\|Q3EBY1_ARATH Uncharacterized protein At2g18460.2 OS=Ar... 33 5.4 tr\|Q304C2\|Q304C2_ARATH Uncharacterized protein At2g18460.1 OS=Ar... 33 5.4 >tr\|Q3EBY1\|Q3EBY1_ARATH Uncharacterized protein At2g18460.2 OS=Arabidopsis thaliana GN=At2g18460 PE=4 SV=2 Length = 251 Score = 33.5 bits (75), Expect = 5.4 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 9/53 (16%) Frame = +1 Query: 151 TCCNVNMFSLGFPPTCFFIVFLKGVSFEQWL--------RW-DKKIPLSTYIY 282 T +NMF LGF + FI F+ GV WL W KK+PL +YIY Sbjct: 90 THLGINMFGLGFVTSITFI-FMVGVFMSSWLGASVLSIGEWFIKKMPLVSYIY 141 >tr\|Q304C2\|Q304C2_ARATH Uncharacterized protein At2g18460.1 OS=Arabidopsis thaliana GN=At2g18460 PE=4 SV=1 Length = 213 Score = 33.5 bits (75), Expect = 5.4 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 9/53 (16%) Frame = +1 Query: 151 TCCNVNMFSLGFPPTCFFIVFLKGVSFEQWL--------RW-DKKIPLSTYIY 282 T +NMF LGF + FI F+ GV WL W KK+PL +YIY Sbjct: 51 THLGINMFGLGFVTSITFI-FMVGVFMSSWLGASVLSIGEWFIKKMPLVSYIY 102