BP921682 |
Clone id |
YMU001_000152_H08 |
Library |
YMU01 |
Length |
513 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000152_H08. |
Accession |
BP921682 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AGTGATACTCCTGGTAGAACAGAGTTGGAGATTTCTAGATTGCATGACATGAACATAGAG AATATCTCTTTTTTTCCGAAAGCGGAGTTAGATATGCACTCTGATGTTAAACATATTGTG AACTCGATCATGCCAAGGCGAACTTTGCTTGATAAGTATCATGAAAATTCCAGTCAAGAA GCACAGGTGCCTGAAAGATACTCTAAATCTAGAAAGAATAACCAACAACTCATCACAAAA GGTTGGGAGGAAAGCCGTGGTAAACCAGTGGCTGTGACATCTCCTGTCCTGGAGAAGATC AGGCATTTTGAATCACTGGGAGGGCATGCACGAGAGAAACATGAGGTGACGGCCGATGTT ACGCAAGGCCATTTGACAGGCGACATGAGGCAGTCAAGCACTAGCTCTACATGGATGCGC CATTCAGATCATTTTTAGATCAATTCTTTCGCTGTACATGCTGTAATTTTATTTATGGTA AATTGTATGCTAAGAATCATTTCTCACTGATTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P97303 |
Definition |
sp|P97303|BACH2_MOUSE Transcription regulator protein BACH2 OS=Mus musculus |
Align length |
54 |
Score (bit) |
32.7 |
E-value |
1.0 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921682|Adiantum capillus-veneris mRNA, clone: YMU001_000152_H08. (513 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P97303|BACH2_MOUSE Transcription regulator protein BACH2 OS=M... 33 1.0 sp|Q05017|PLB1_RABIT Phospholipase B1, membrane-associated OS=Or... 32 1.8 sp|Q6AG41|TRUB_LEIXX tRNA pseudouridine synthase B OS=Leifsonia ... 31 3.0 sp|A6T2E8|SECA_JANMA Protein translocase subunit secA OS=Janthin... 31 3.0 sp|Q6AYL9|NUF2_RAT Kinetochore protein Nuf2 OS=Rattus norvegicus... 31 3.9 sp|Q8CHP6|PHC3_MOUSE Polyhomeotic-like protein 3 OS=Mus musculus... 30 5.0 sp|Q28C98|HDDC3_XENTR HD domain-containing protein 3 OS=Xenopus ... 30 5.1 sp|P34537|BRE1_CAEEL E3 ubiquitin-protein ligase bre-1 OS=Caenor... 30 5.1 sp|A4G8S7|SECA_HERAR Protein translocase subunit secA OS=Hermini... 30 6.7 sp|Q1IRZ2|KATG_ACIBL Catalase-peroxidase OS=Acidobacteria bacter... 30 6.7 sp|P57312|FTSW_BUCAI Cell division protein ftsW OS=Buchnera aphi... 30 8.5 sp|Q46HH3|RNH_PROMT Ribonuclease H OS=Prochlorococcus marinus (s... 30 8.7 sp|A7N1L2|PURR_VIBHB HTH-type transcriptional repressor purR OS=... 30 8.7
>sp|P97303|BACH2_MOUSE Transcription regulator protein BACH2 OS=Mus musculus GN=Bach2 PE=2 SV=1 Length = 716
Score = 32.7 bits (73), Expect = 1.0 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = -2
Query: 383 SPVKWPCVTSAVTSCFSRACPPSDSKCL--IFSRTGDVTATGLPRLSSQPFVMS 228 SP + P T +C R+ S CL +F T V +TGLP S QP V S Sbjct: 314 SPARTPS-TRTGAACLDRSRSVSSPSCLRSLFGITKGVESTGLPSTSQQPLVRS 366
>sp|Q05017|PLB1_RABIT Phospholipase B1, membrane-associated OS=Oryctolagus cuniculus GN=PLB1 PE=2 SV=1 Length = 1458
Score = 32.0 bits (71), Expect = 1.8 Identities = 25/92 (27%), Positives = 43/92 (46%) Frame = +1
Query: 25 LEISRLHDMNIENISFFPKAELDMHSDVKHIVNSIMPRRTLLDKYHENSSQEAQVPERYS 204 LEIS+L ++ E P+ I+ S+ P + K+ +NS++ A + E Sbjct: 556 LEISKLRELYQETKVSCPRM----------ILRSLCP---CVLKFDDNSTEIASLIETIK 602
Query: 205 KSRKNNQQLITKGWEESRGKPVAVTSPVLEKI 300 + ++ QQLI G ++R V P EK+ Sbjct: 603 EYQERTQQLIDSGRYDTRDDFTVVLQPFFEKV 634
>sp|Q6AG41|TRUB_LEIXX tRNA pseudouridine synthase B OS=Leifsonia xyli subsp. xyli GN=truB PE=3 SV=1 Length = 302
Score = 31.2 bits (69), Expect = 3.0 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 2/84 (2%) Frame = +1
Query: 112 HIVNSIMPRRTLLDKYHENSS--QEAQVPERYSKSRKNNQQLITKGWEESRGKPVAVTSP 285 H + ++ P L+ SS + ++ E+ + + ++L GWE RG+PVA +P Sbjct: 216 HELATLEPAAALIPATEAASSLFERLRLTEQQATDLAHGKRLHLAGWEGPRGEPVAAIAP 275
Query: 286 VLEKIRHFESLGGHAREKHEVTAD 357 + E G AR AD Sbjct: 276 SGSLVGLIEFRGKEARTLVNFPAD 299
>sp|A6T2E8|SECA_JANMA Protein translocase subunit secA OS=Janthinobacterium sp. (strain Marseille) GN=secA PE=3 SV=1 Length = 920
Score = 31.2 bits (69), Expect = 3.0 Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = +1
Query: 85 ELDMHSDVKHIVNSIMPRRTL-LDKYHENSSQEAQVPERYSKSRKNNQQLITKGWEE 252 + + H+D+ H +N + P +L + + + + +VP Y+K K++Q L+T+ E Sbjct: 226 QAENHTDLYHKINEVPPLLSLQIGEETPDGKGKIEVPGDYTKDEKSHQVLLTEAGHE 282
>sp|Q6AYL9|NUF2_RAT Kinetochore protein Nuf2 OS=Rattus norvegicus GN=Nuf2 PE=2 SV=1 Length = 464
Score = 30.8 bits (68), Expect = 3.9 Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 1/158 (0%) Frame = +1
Query: 25 LEISRLHDMNIENISFFPKAELDMHSDVKHIVNSIMPRRTLLDKYHENSSQEAQVPERYS 204 + I R++D I +I +PKA + I+N I R T L+KY E Q + Sbjct: 96 MPICRVNDFEIADI-LYPKANRTSRF-LSGIINFIHFRETCLEKYEEFLLQ--------N 145
Query: 205 KSRKNNQQLITKGWEESRGKPVAVTSPVLEKIRHFESLGGHARE-KHEVTADVTQGHLTG 381 KS + Q ++ +E+ K + S +E+ F+ L +E +H + D Q Sbjct: 146 KSSVDKIQQLSNAHQEALMKLEKLNSVPVEEQEEFKQLKDDIQELQHLLNQDFRQKTTLL 205
Query: 382 DMRQSSTSSTWMRHSDHF*INSFAVHAVILFMVNCMLR 495 R + S + + H +N + V L V L+ Sbjct: 206 QERYTKMKSDFSEKTKH--VNELKLSVVSLKEVQDSLK 241
>sp|Q8CHP6|PHC3_MOUSE Polyhomeotic-like protein 3 OS=Mus musculus GN=Phc3 PE=1 SV=1 Length = 981
Score = 30.4 bits (67), Expect = 5.0 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = -3
Query: 358 HRPSPHVSLVHALPVIQNA*SSPGQEMSQP 269 H P P +VH PV Q+A SPGQ+M P Sbjct: 452 HLPLPASPVVHIGPVQQSALVSPGQQMVSP 481
>sp|Q28C98|HDDC3_XENTR HD domain-containing protein 3 OS=Xenopus tropicalis GN=hddc3 PE=2 SV=1 Length = 179
Score = 30.4 bits (67), Expect = 5.1 Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 10/88 (11%) Frame = +1
Query: 25 LEISRLHDMNIENISFFPKAELDMHSDVKHIVNSI--------MPRRTLLDKYHENSSQE 180 L+ + LHD + + F + EL DV++IV + M R+ L ++ + SQ+ Sbjct: 55 LQAALLHDTVEDTNTTFEEIELHFGQDVRNIVEEVTDDKTLPKMERKRLQMEHAPHCSQK 114
Query: 181 AQVPERYSK--SRKNNQQLITKGWEESR 258 A++ + K + ++ ++ +GW E R Sbjct: 115 AKLVKLADKLYNLRDLKRCTPEGWSEQR 142
>sp|P34537|BRE1_CAEEL E3 ubiquitin-protein ligase bre-1 OS=Caenorhabditis elegans GN=rfp-1 PE=1 SV=2 Length = 837
Score = 30.4 bits (67), Expect = 5.1 Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Frame = +1
Query: 139 RTLLDKYHENSSQEAQVPERYSKSRKNNQQLITKGWEESRGKPVAVT--SPVLEKIRHFE 312 R L + +AQ+ + + +K N++L+TK E + K +T + ++E+ R Sbjct: 639 REKLSCLESKAQTDAQIAKMHEFEKKANEELVTKLSESVQFKSAELTRLTNLMEQHRKNI 698
Query: 313 SLGGHAREKHEVTADVTQGHL 375 G +R+++++ AD +G + Sbjct: 699 QEVGMSRDENQIKADRCEGQM 719
>sp|A4G8S7|SECA_HERAR Protein translocase subunit secA OS=Herminiimonas arsenicoxydans GN=secA PE=3 SV=1 Length = 921
Score = 30.0 bits (66), Expect = 6.7 Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +1
Query: 85 ELDMHSDVKHIVNSIMPRRTL-LDKYHENSSQEAQVPERYSKSRKNNQQLITKGWEE 252 + + H+++ H +N++ P TL + + + +VP Y+K K +Q L+T+ E Sbjct: 226 QAENHTELYHKINAVPPLLTLQIGEETPDGKGTVEVPGDYTKDEKAHQVLLTEAGHE 282
>sp|Q1IRZ2|KATG_ACIBL Catalase-peroxidase OS=Acidobacteria bacterium (strain Ellin345) GN=katG PE=3 SV=1 Length = 752
Score = 30.0 bits (66), Expect = 6.7 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Frame = +1
Query: 238 KGWEESRGKPVAVTSPVLEKIRH-FESLGG 324 K WE ++ K +A PVLEKI+H F + GG Sbjct: 510 KDWEVNQPKELAKVLPVLEKIQHDFNAQGG 539
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5U8V4 |
Definition |
tr|Q5U8V4|Q5U8V4_ANGJA Vitellogenin OS=Anguilla japonica |
Align length |
101 |
Score (bit) |
39.3 |
E-value |
0.12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921682|Adiantum capillus-veneris mRNA, clone: YMU001_000152_H08. (513 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5U8V4|Q5U8V4_ANGJA Vitellogenin OS=Anguilla japonica PE=2 SV=1 39 0.12 tr|B4AW39|B4AW39_9CHRO TROVE domain protein OS=Cyanothece sp. PC... 39 0.20 tr|A2ZK24|A2ZK24_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.75 tr|Q5MBR6|Q5MBR6_ORYSJ Os12g0435200 protein OS=Oryza sativa subs... 36 0.98 tr|Q3J1E0|Q3J1E0_RHOS4 Putative uncharacterized protein OS=Rhodo... 35 2.9 tr|A0EI04|A0EI04_PARTE Chromosome undetermined scaffold_98, whol... 35 2.9 tr|B3CN74|B3CN74_WOLPP Putative uncharacterized protein OS=Wolba... 34 3.7 tr|B6Y8A9|B6Y8A9_9RICK Putative uncharacterized protein OS=Wolba... 34 3.7 tr|A1U2P2|A1U2P2_MARAV Diguanylate cyclase/phosphodiesterase OS=... 34 4.9 tr|A3U3D4|A3U3D4_9RHOB Putative uncharacterized protein OS=Ocean... 33 6.4 tr|B7FYY5|B7FYY5_PHATR Xeroderma pigmentosum group A protein OS=... 33 6.4 tr|B3L438|B3L438_PLAKH Putative uncharacterized protein OS=Plasm... 33 6.4 tr|B6HKI8|B6HKI8_PENCH Pc21g11700 protein OS=Penicillium chrysog... 33 6.4 tr|A4R137|A4R137_MAGGR Predicted protein OS=Magnaporthe grisea G... 33 6.4 tr|Q07GR2|Q07GR2_ROSDO Putative uncharacterized protein OS=Roseo... 33 8.3 tr|A3VM82|A3VM82_9RHOB Putative uncharacterized protein OS=Rhodo... 33 8.3 tr|A7PFL5|A7PFL5_VITVI Chromosome chr11 scaffold_14, whole genom... 33 8.3 tr|Q3BHL4|Q3BHL4_PLAFA Erythrocyte membrane protein (Fragment) O... 33 8.3 tr|Q3BHI6|Q3BHI6_PLAFA Erythrocyte membrane protein (Fragment) O... 33 8.3
>tr|Q5U8V4|Q5U8V4_ANGJA Vitellogenin OS=Anguilla japonica PE=2 SV=1 Length = 1742
Score = 39.3 bits (90), Expect = 0.12 Identities = 25/101 (24%), Positives = 46/101 (45%) Frame = +1
Query: 109 KHIVNSIMPRRTLLDKYHENSSQEAQVPERYSKSRKNNQQLITKGWEESRGKPVAVTSPV 288 KH ++ RRT +SS + R SKS K ++++ W SR + +S Sbjct: 1135 KHQASASKVRRTPSSSSSSSSSSSSSSSSRKSKSPKGSKKVSASSWSSSRSASSSGSSMS 1194
Query: 289 LEKIRHFESLGGHAREKHEVTADVTQGHLTGDMRQSSTSST 411 +I ++ H + H + V++G ++ R SST ++ Sbjct: 1195 QAEIYDYKFTKNHIHQ-HAASKGVSRGRVSSSSRTSSTGNS 1234
>tr|B4AW39|B4AW39_9CHRO TROVE domain protein OS=Cyanothece sp. PCC 7822 GN=Cyan7822DRAFT_0581 PE=4 SV=1 Length = 534
Score = 38.5 bits (88), Expect = 0.20 Identities = 21/54 (38%), Positives = 30/54 (55%) Frame = +1
Query: 226 QLITKGWEESRGKPVAVTSPVLEKIRHFESLGGHAREKHEVTADVTQGHLTGDM 387 Q + KGWE+ P + SP L ++ +E L H + HE +TQGHLT +M Sbjct: 203 QWVVKGWEDL---PEEIPSPALAQVWWYEWLKRHPDKTHEA---ITQGHLTHEM 250
>tr|A2ZK24|A2ZK24_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38181 PE=4 SV=1 Length = 576
Score = 36.6 bits (83), Expect = 0.75 Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 10/145 (6%) Frame = +1
Query: 1 SDTPGRTELEISRLHDMNI-ENISFFPKAELDMH--------SDVKHIVNSIMPRRTLLD 153 +D P + + S +HD I E + FP+++L ++ S + + +++PR +L Sbjct: 305 ADVPILSLQKPSVMHDFAITERYAIFPESQLIVNPMDMVMRGSSLVGLDRTMVPRIGVLP 364
Query: 154 KYHENSSQEAQVPERYSKSRKNNQQLITKGWEESRGKPVAVTSPVLEKIRHFESLGGHAR 333 +Y ++ S R+ + + N T GWEE+ G+ + + +P + I H LG Sbjct: 365 RYAKDESDM-----RWFEVPRFNMLHTTNGWEEADGEEIVLVAPNILSIEHM--LGN--M 415
Query: 334 EKHEVTADVTQGHL-TGDMRQSSTS 405 E + D+ + +L TGD+ ++ S Sbjct: 416 ELMQARVDMVRINLCTGDVSCTALS 440
>tr|Q5MBR6|Q5MBR6_ORYSJ Os12g0435200 protein OS=Oryza sativa subsp. japonica GN=NCED2 PE=2 SV=1 Length = 576
Score = 36.2 bits (82), Expect = 0.98 Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 9/111 (8%) Frame = +1
Query: 1 SDTPGRTELEISRLHDMNI-ENISFFPKAELDMH--------SDVKHIVNSIMPRRTLLD 153 +D P + + S +HD I E + FP+++L ++ S + + +++PR +L Sbjct: 305 ADVPILSLQKPSVMHDFAITERYAIFPESQLIVNPMDMVMRGSSLVGLDRTMVPRIGVLP 364
Query: 154 KYHENSSQEAQVPERYSKSRKNNQQLITKGWEESRGKPVAVTSPVLEKIRH 306 +Y ++ S R+ + + N T GWEE+ G+ + + +P + I H Sbjct: 365 RYAKDESDM-----RWFEVPRFNMLHTTNGWEEADGEEIVLVAPNILSIEH 410
>tr|Q3J1E0|Q3J1E0_RHOS4 Putative uncharacterized protein OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=RHOS4_18260 PE=4 SV=1 Length = 423
Score = 34.7 bits (78), Expect = 2.9 Identities = 19/66 (28%), Positives = 33/66 (50%) Frame = +1
Query: 223 QQLITKGWEESRGKPVAVTSPVLEKIRHFESLGGHAREKHEVTADVTQGHLTGDMRQSST 402 ++ +++ ++ + V S + E++ HFE L G E EV +GH TGD S Sbjct: 116 ERFVSQAHRDAEERDVPTGSVIRERLGHFEELTG-GFEFAEVIRRYWEGHETGDDELKSA 174
Query: 403 SSTWMR 420 + W+R Sbjct: 175 ALRWLR 180
>tr|A0EI04|A0EI04_PARTE Chromosome undetermined scaffold_98, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00027272001 PE=4 SV=1 Length = 1069
Score = 34.7 bits (78), Expect = 2.9 Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Frame = +1
Query: 55 IENISFFPKAELDMHSDVKHIVNSIMPRRTLLDKYHE--NSSQEAQVPERYSKSRKNNQQ 228 IENIS + + ELD ++ + ++ ++ LDK + +S +E Q+ E+Y + + N+Q Sbjct: 992 IENISAYAEDELDDENEQQGSDKKVVEKKMKLDKKSKDLDSEEERQIYEKYMEQQAQNEQ 1051
Query: 229 L 231 + Sbjct: 1052 I 1052
>tr|B3CN74|B3CN74_WOLPP Putative uncharacterized protein OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=WP0098 PE=4 SV=1 Length = 703
Score = 34.3 bits (77), Expect = 3.7 Identities = 20/58 (34%), Positives = 28/58 (48%) Frame = +1
Query: 193 ERYSKSRKNNQQLITKGWEESRGKPVAVTSPVLEKIRHFESLGGHAREKHEVTADVTQ 366 ER +K K N +L G + + +K+R E L G REK EV A++TQ Sbjct: 281 ERINKLEKENTRLT--------GNNQTILEQLQQKMREVEELNGKVREKDEVLAEITQ 330
>tr|B6Y8A9|B6Y8A9_9RICK Putative uncharacterized protein OS=Wolbachia endosymbiont of Culex quinquefasciatus JHB GN=C1A_960 PE=4 SV=1 Length = 703
Score = 34.3 bits (77), Expect = 3.7 Identities = 20/58 (34%), Positives = 28/58 (48%) Frame = +1
Query: 193 ERYSKSRKNNQQLITKGWEESRGKPVAVTSPVLEKIRHFESLGGHAREKHEVTADVTQ 366 ER +K K N +L G + + +K+R E L G REK EV A++TQ Sbjct: 281 ERINKLEKENTRLT--------GNNQTILEQLQQKMREVEELNGKVREKDEVLAEITQ 330
>tr|A1U2P2|A1U2P2_MARAV Diguanylate cyclase/phosphodiesterase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=Maqu_2182 PE=4 SV=1 Length = 768
Score = 33.9 bits (76), Expect = 4.9 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%) Frame = +1
Query: 151 DKYHENSSQEAQVPERYSKSRKNNQQLIT--KGWEESRGKPVA 273 DKY + S+E PERYS S+ N ++L + +EE GK +A Sbjct: 208 DKYVQFMSREGATPERYSASQVNEERLSAQRRDFEEGTGKTMA 250
>tr|A3U3D4|A3U3D4_9RHOB Putative uncharacterized protein OS=Oceanicola batsensis HTCC2597 GN=OB2597_18446 PE=4 SV=1 Length = 440
Score = 33.5 bits (75), Expect = 6.4 Identities = 18/66 (27%), Positives = 33/66 (50%) Frame = +1
Query: 223 QQLITKGWEESRGKPVAVTSPVLEKIRHFESLGGHAREKHEVTADVTQGHLTGDMRQSST 402 ++ +++ ++ + + S + E++ HFE L G E EV +GH TGD S Sbjct: 133 ERFVSQAHRDAEERDLPTGSVIRERLGHFEELTG-GFEFAEVIRRYWEGHETGDDELKSA 191
Query: 403 SSTWMR 420 + W+R Sbjct: 192 ALRWLR 197
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