BP921682
Clone id YMU001_000152_H08
Library
Length 513
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000152_H08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGTGATACTCCTGGTAGAACAGAGTTGGAGATTTCTAGATTGCATGACATGAACATAGAG
AATATCTCTTTTTTTCCGAAAGCGGAGTTAGATATGCACTCTGATGTTAAACATATTGTG
AACTCGATCATGCCAAGGCGAACTTTGCTTGATAAGTATCATGAAAATTCCAGTCAAGAA
GCACAGGTGCCTGAAAGATACTCTAAATCTAGAAAGAATAACCAACAACTCATCACAAAA
GGTTGGGAGGAAAGCCGTGGTAAACCAGTGGCTGTGACATCTCCTGTCCTGGAGAAGATC
AGGCATTTTGAATCACTGGGAGGGCATGCACGAGAGAAACATGAGGTGACGGCCGATGTT
ACGCAAGGCCATTTGACAGGCGACATGAGGCAGTCAAGCACTAGCTCTACATGGATGCGC
CATTCAGATCATTTTTAGATCAATTCTTTCGCTGTACATGCTGTAATTTTATTTATGGTA
AATTGTATGCTAAGAATCATTTCTCACTGATTT
■■Homology search results ■■ -
sp_hit_id P97303
Definition sp|P97303|BACH2_MOUSE Transcription regulator protein BACH2 OS=Mus musculus
Align length 54
Score (bit) 32.7
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921682|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_H08.
(513 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P97303|BACH2_MOUSE Transcription regulator protein BACH2 OS=M... 33 1.0
sp|Q05017|PLB1_RABIT Phospholipase B1, membrane-associated OS=Or... 32 1.8
sp|Q6AG41|TRUB_LEIXX tRNA pseudouridine synthase B OS=Leifsonia ... 31 3.0
sp|A6T2E8|SECA_JANMA Protein translocase subunit secA OS=Janthin... 31 3.0
sp|Q6AYL9|NUF2_RAT Kinetochore protein Nuf2 OS=Rattus norvegicus... 31 3.9
sp|Q8CHP6|PHC3_MOUSE Polyhomeotic-like protein 3 OS=Mus musculus... 30 5.0
sp|Q28C98|HDDC3_XENTR HD domain-containing protein 3 OS=Xenopus ... 30 5.1
sp|P34537|BRE1_CAEEL E3 ubiquitin-protein ligase bre-1 OS=Caenor... 30 5.1
sp|A4G8S7|SECA_HERAR Protein translocase subunit secA OS=Hermini... 30 6.7
sp|Q1IRZ2|KATG_ACIBL Catalase-peroxidase OS=Acidobacteria bacter... 30 6.7
sp|P57312|FTSW_BUCAI Cell division protein ftsW OS=Buchnera aphi... 30 8.5
sp|Q46HH3|RNH_PROMT Ribonuclease H OS=Prochlorococcus marinus (s... 30 8.7
sp|A7N1L2|PURR_VIBHB HTH-type transcriptional repressor purR OS=... 30 8.7

>sp|P97303|BACH2_MOUSE Transcription regulator protein BACH2 OS=Mus
musculus GN=Bach2 PE=2 SV=1
Length = 716

Score = 32.7 bits (73), Expect = 1.0
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -2

Query: 383 SPVKWPCVTSAVTSCFSRACPPSDSKCL--IFSRTGDVTATGLPRLSSQPFVMS 228
SP + P T +C R+ S CL +F T V +TGLP S QP V S
Sbjct: 314 SPARTPS-TRTGAACLDRSRSVSSPSCLRSLFGITKGVESTGLPSTSQQPLVRS 366


>sp|Q05017|PLB1_RABIT Phospholipase B1, membrane-associated
OS=Oryctolagus cuniculus GN=PLB1 PE=2 SV=1
Length = 1458

Score = 32.0 bits (71), Expect = 1.8
Identities = 25/92 (27%), Positives = 43/92 (46%)
Frame = +1

Query: 25 LEISRLHDMNIENISFFPKAELDMHSDVKHIVNSIMPRRTLLDKYHENSSQEAQVPERYS 204
LEIS+L ++ E P+ I+ S+ P + K+ +NS++ A + E
Sbjct: 556 LEISKLRELYQETKVSCPRM----------ILRSLCP---CVLKFDDNSTEIASLIETIK 602

Query: 205 KSRKNNQQLITKGWEESRGKPVAVTSPVLEKI 300
+ ++ QQLI G ++R V P EK+
Sbjct: 603 EYQERTQQLIDSGRYDTRDDFTVVLQPFFEKV 634


>sp|Q6AG41|TRUB_LEIXX tRNA pseudouridine synthase B OS=Leifsonia
xyli subsp. xyli GN=truB PE=3 SV=1
Length = 302

Score = 31.2 bits (69), Expect = 3.0
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +1

Query: 112 HIVNSIMPRRTLLDKYHENSS--QEAQVPERYSKSRKNNQQLITKGWEESRGKPVAVTSP 285
H + ++ P L+ SS + ++ E+ + + ++L GWE RG+PVA +P
Sbjct: 216 HELATLEPAAALIPATEAASSLFERLRLTEQQATDLAHGKRLHLAGWEGPRGEPVAAIAP 275

Query: 286 VLEKIRHFESLGGHAREKHEVTAD 357
+ E G AR AD
Sbjct: 276 SGSLVGLIEFRGKEARTLVNFPAD 299


>sp|A6T2E8|SECA_JANMA Protein translocase subunit secA
OS=Janthinobacterium sp. (strain Marseille) GN=secA PE=3
SV=1
Length = 920

Score = 31.2 bits (69), Expect = 3.0
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1

Query: 85 ELDMHSDVKHIVNSIMPRRTL-LDKYHENSSQEAQVPERYSKSRKNNQQLITKGWEE 252
+ + H+D+ H +N + P +L + + + + +VP Y+K K++Q L+T+ E
Sbjct: 226 QAENHTDLYHKINEVPPLLSLQIGEETPDGKGKIEVPGDYTKDEKSHQVLLTEAGHE 282


>sp|Q6AYL9|NUF2_RAT Kinetochore protein Nuf2 OS=Rattus norvegicus
GN=Nuf2 PE=2 SV=1
Length = 464

Score = 30.8 bits (68), Expect = 3.9
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 1/158 (0%)
Frame = +1

Query: 25 LEISRLHDMNIENISFFPKAELDMHSDVKHIVNSIMPRRTLLDKYHENSSQEAQVPERYS 204
+ I R++D I +I +PKA + I+N I R T L+KY E Q +
Sbjct: 96 MPICRVNDFEIADI-LYPKANRTSRF-LSGIINFIHFRETCLEKYEEFLLQ--------N 145

Query: 205 KSRKNNQQLITKGWEESRGKPVAVTSPVLEKIRHFESLGGHARE-KHEVTADVTQGHLTG 381
KS + Q ++ +E+ K + S +E+ F+ L +E +H + D Q
Sbjct: 146 KSSVDKIQQLSNAHQEALMKLEKLNSVPVEEQEEFKQLKDDIQELQHLLNQDFRQKTTLL 205

Query: 382 DMRQSSTSSTWMRHSDHF*INSFAVHAVILFMVNCMLR 495
R + S + + H +N + V L V L+
Sbjct: 206 QERYTKMKSDFSEKTKH--VNELKLSVVSLKEVQDSLK 241


>sp|Q8CHP6|PHC3_MOUSE Polyhomeotic-like protein 3 OS=Mus musculus
GN=Phc3 PE=1 SV=1
Length = 981

Score = 30.4 bits (67), Expect = 5.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -3

Query: 358 HRPSPHVSLVHALPVIQNA*SSPGQEMSQP 269
H P P +VH PV Q+A SPGQ+M P
Sbjct: 452 HLPLPASPVVHIGPVQQSALVSPGQQMVSP 481


>sp|Q28C98|HDDC3_XENTR HD domain-containing protein 3 OS=Xenopus
tropicalis GN=hddc3 PE=2 SV=1
Length = 179

Score = 30.4 bits (67), Expect = 5.1
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Frame = +1

Query: 25 LEISRLHDMNIENISFFPKAELDMHSDVKHIVNSI--------MPRRTLLDKYHENSSQE 180
L+ + LHD + + F + EL DV++IV + M R+ L ++ + SQ+
Sbjct: 55 LQAALLHDTVEDTNTTFEEIELHFGQDVRNIVEEVTDDKTLPKMERKRLQMEHAPHCSQK 114

Query: 181 AQVPERYSK--SRKNNQQLITKGWEESR 258
A++ + K + ++ ++ +GW E R
Sbjct: 115 AKLVKLADKLYNLRDLKRCTPEGWSEQR 142


>sp|P34537|BRE1_CAEEL E3 ubiquitin-protein ligase bre-1
OS=Caenorhabditis elegans GN=rfp-1 PE=1 SV=2
Length = 837

Score = 30.4 bits (67), Expect = 5.1
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +1

Query: 139 RTLLDKYHENSSQEAQVPERYSKSRKNNQQLITKGWEESRGKPVAVT--SPVLEKIRHFE 312
R L + +AQ+ + + +K N++L+TK E + K +T + ++E+ R
Sbjct: 639 REKLSCLESKAQTDAQIAKMHEFEKKANEELVTKLSESVQFKSAELTRLTNLMEQHRKNI 698

Query: 313 SLGGHAREKHEVTADVTQGHL 375
G +R+++++ AD +G +
Sbjct: 699 QEVGMSRDENQIKADRCEGQM 719


>sp|A4G8S7|SECA_HERAR Protein translocase subunit secA
OS=Herminiimonas arsenicoxydans GN=secA PE=3 SV=1
Length = 921

Score = 30.0 bits (66), Expect = 6.7
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1

Query: 85 ELDMHSDVKHIVNSIMPRRTL-LDKYHENSSQEAQVPERYSKSRKNNQQLITKGWEE 252
+ + H+++ H +N++ P TL + + + +VP Y+K K +Q L+T+ E
Sbjct: 226 QAENHTELYHKINAVPPLLTLQIGEETPDGKGTVEVPGDYTKDEKAHQVLLTEAGHE 282


>sp|Q1IRZ2|KATG_ACIBL Catalase-peroxidase OS=Acidobacteria bacterium
(strain Ellin345) GN=katG PE=3 SV=1
Length = 752

Score = 30.0 bits (66), Expect = 6.7
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1

Query: 238 KGWEESRGKPVAVTSPVLEKIRH-FESLGG 324
K WE ++ K +A PVLEKI+H F + GG
Sbjct: 510 KDWEVNQPKELAKVLPVLEKIQHDFNAQGG 539


tr_hit_id Q5U8V4
Definition tr|Q5U8V4|Q5U8V4_ANGJA Vitellogenin OS=Anguilla japonica
Align length 101
Score (bit) 39.3
E-value 0.12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921682|Adiantum capillus-veneris mRNA, clone:
YMU001_000152_H08.
(513 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5U8V4|Q5U8V4_ANGJA Vitellogenin OS=Anguilla japonica PE=2 SV=1 39 0.12
tr|B4AW39|B4AW39_9CHRO TROVE domain protein OS=Cyanothece sp. PC... 39 0.20
tr|A2ZK24|A2ZK24_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.75
tr|Q5MBR6|Q5MBR6_ORYSJ Os12g0435200 protein OS=Oryza sativa subs... 36 0.98
tr|Q3J1E0|Q3J1E0_RHOS4 Putative uncharacterized protein OS=Rhodo... 35 2.9
tr|A0EI04|A0EI04_PARTE Chromosome undetermined scaffold_98, whol... 35 2.9
tr|B3CN74|B3CN74_WOLPP Putative uncharacterized protein OS=Wolba... 34 3.7
tr|B6Y8A9|B6Y8A9_9RICK Putative uncharacterized protein OS=Wolba... 34 3.7
tr|A1U2P2|A1U2P2_MARAV Diguanylate cyclase/phosphodiesterase OS=... 34 4.9
tr|A3U3D4|A3U3D4_9RHOB Putative uncharacterized protein OS=Ocean... 33 6.4
tr|B7FYY5|B7FYY5_PHATR Xeroderma pigmentosum group A protein OS=... 33 6.4
tr|B3L438|B3L438_PLAKH Putative uncharacterized protein OS=Plasm... 33 6.4
tr|B6HKI8|B6HKI8_PENCH Pc21g11700 protein OS=Penicillium chrysog... 33 6.4
tr|A4R137|A4R137_MAGGR Predicted protein OS=Magnaporthe grisea G... 33 6.4
tr|Q07GR2|Q07GR2_ROSDO Putative uncharacterized protein OS=Roseo... 33 8.3
tr|A3VM82|A3VM82_9RHOB Putative uncharacterized protein OS=Rhodo... 33 8.3
tr|A7PFL5|A7PFL5_VITVI Chromosome chr11 scaffold_14, whole genom... 33 8.3
tr|Q3BHL4|Q3BHL4_PLAFA Erythrocyte membrane protein (Fragment) O... 33 8.3
tr|Q3BHI6|Q3BHI6_PLAFA Erythrocyte membrane protein (Fragment) O... 33 8.3

>tr|Q5U8V4|Q5U8V4_ANGJA Vitellogenin OS=Anguilla japonica PE=2 SV=1
Length = 1742

Score = 39.3 bits (90), Expect = 0.12
Identities = 25/101 (24%), Positives = 46/101 (45%)
Frame = +1

Query: 109 KHIVNSIMPRRTLLDKYHENSSQEAQVPERYSKSRKNNQQLITKGWEESRGKPVAVTSPV 288
KH ++ RRT +SS + R SKS K ++++ W SR + +S
Sbjct: 1135 KHQASASKVRRTPSSSSSSSSSSSSSSSSRKSKSPKGSKKVSASSWSSSRSASSSGSSMS 1194

Query: 289 LEKIRHFESLGGHAREKHEVTADVTQGHLTGDMRQSSTSST 411
+I ++ H + H + V++G ++ R SST ++
Sbjct: 1195 QAEIYDYKFTKNHIHQ-HAASKGVSRGRVSSSSRTSSTGNS 1234


>tr|B4AW39|B4AW39_9CHRO TROVE domain protein OS=Cyanothece sp. PCC
7822 GN=Cyan7822DRAFT_0581 PE=4 SV=1
Length = 534

Score = 38.5 bits (88), Expect = 0.20
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1

Query: 226 QLITKGWEESRGKPVAVTSPVLEKIRHFESLGGHAREKHEVTADVTQGHLTGDM 387
Q + KGWE+ P + SP L ++ +E L H + HE +TQGHLT +M
Sbjct: 203 QWVVKGWEDL---PEEIPSPALAQVWWYEWLKRHPDKTHEA---ITQGHLTHEM 250


>tr|A2ZK24|A2ZK24_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_38181 PE=4 SV=1
Length = 576

Score = 36.6 bits (83), Expect = 0.75
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Frame = +1

Query: 1 SDTPGRTELEISRLHDMNI-ENISFFPKAELDMH--------SDVKHIVNSIMPRRTLLD 153
+D P + + S +HD I E + FP+++L ++ S + + +++PR +L
Sbjct: 305 ADVPILSLQKPSVMHDFAITERYAIFPESQLIVNPMDMVMRGSSLVGLDRTMVPRIGVLP 364

Query: 154 KYHENSSQEAQVPERYSKSRKNNQQLITKGWEESRGKPVAVTSPVLEKIRHFESLGGHAR 333
+Y ++ S R+ + + N T GWEE+ G+ + + +P + I H LG
Sbjct: 365 RYAKDESDM-----RWFEVPRFNMLHTTNGWEEADGEEIVLVAPNILSIEHM--LGN--M 415

Query: 334 EKHEVTADVTQGHL-TGDMRQSSTS 405
E + D+ + +L TGD+ ++ S
Sbjct: 416 ELMQARVDMVRINLCTGDVSCTALS 440


>tr|Q5MBR6|Q5MBR6_ORYSJ Os12g0435200 protein OS=Oryza sativa subsp.
japonica GN=NCED2 PE=2 SV=1
Length = 576

Score = 36.2 bits (82), Expect = 0.98
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Frame = +1

Query: 1 SDTPGRTELEISRLHDMNI-ENISFFPKAELDMH--------SDVKHIVNSIMPRRTLLD 153
+D P + + S +HD I E + FP+++L ++ S + + +++PR +L
Sbjct: 305 ADVPILSLQKPSVMHDFAITERYAIFPESQLIVNPMDMVMRGSSLVGLDRTMVPRIGVLP 364

Query: 154 KYHENSSQEAQVPERYSKSRKNNQQLITKGWEESRGKPVAVTSPVLEKIRH 306
+Y ++ S R+ + + N T GWEE+ G+ + + +P + I H
Sbjct: 365 RYAKDESDM-----RWFEVPRFNMLHTTNGWEEADGEEIVLVAPNILSIEH 410


>tr|Q3J1E0|Q3J1E0_RHOS4 Putative uncharacterized protein
OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 /
NCIB 8253 / DSM 158) GN=RHOS4_18260 PE=4 SV=1
Length = 423

Score = 34.7 bits (78), Expect = 2.9
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +1

Query: 223 QQLITKGWEESRGKPVAVTSPVLEKIRHFESLGGHAREKHEVTADVTQGHLTGDMRQSST 402
++ +++ ++ + V S + E++ HFE L G E EV +GH TGD S
Sbjct: 116 ERFVSQAHRDAEERDVPTGSVIRERLGHFEELTG-GFEFAEVIRRYWEGHETGDDELKSA 174

Query: 403 SSTWMR 420
+ W+R
Sbjct: 175 ALRWLR 180


>tr|A0EI04|A0EI04_PARTE Chromosome undetermined scaffold_98, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00027272001 PE=4 SV=1
Length = 1069

Score = 34.7 bits (78), Expect = 2.9
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +1

Query: 55 IENISFFPKAELDMHSDVKHIVNSIMPRRTLLDKYHE--NSSQEAQVPERYSKSRKNNQQ 228
IENIS + + ELD ++ + ++ ++ LDK + +S +E Q+ E+Y + + N+Q
Sbjct: 992 IENISAYAEDELDDENEQQGSDKKVVEKKMKLDKKSKDLDSEEERQIYEKYMEQQAQNEQ 1051

Query: 229 L 231
+
Sbjct: 1052 I 1052


>tr|B3CN74|B3CN74_WOLPP Putative uncharacterized protein
OS=Wolbachia pipientis subsp. Culex pipiens (strain
wPip) GN=WP0098 PE=4 SV=1
Length = 703

Score = 34.3 bits (77), Expect = 3.7
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +1

Query: 193 ERYSKSRKNNQQLITKGWEESRGKPVAVTSPVLEKIRHFESLGGHAREKHEVTADVTQ 366
ER +K K N +L G + + +K+R E L G REK EV A++TQ
Sbjct: 281 ERINKLEKENTRLT--------GNNQTILEQLQQKMREVEELNGKVREKDEVLAEITQ 330


>tr|B6Y8A9|B6Y8A9_9RICK Putative uncharacterized protein
OS=Wolbachia endosymbiont of Culex quinquefasciatus JHB
GN=C1A_960 PE=4 SV=1
Length = 703

Score = 34.3 bits (77), Expect = 3.7
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +1

Query: 193 ERYSKSRKNNQQLITKGWEESRGKPVAVTSPVLEKIRHFESLGGHAREKHEVTADVTQ 366
ER +K K N +L G + + +K+R E L G REK EV A++TQ
Sbjct: 281 ERINKLEKENTRLT--------GNNQTILEQLQQKMREVEELNGKVREKDEVLAEITQ 330


>tr|A1U2P2|A1U2P2_MARAV Diguanylate cyclase/phosphodiesterase
OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM
11845 / VT8) GN=Maqu_2182 PE=4 SV=1
Length = 768

Score = 33.9 bits (76), Expect = 4.9
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +1

Query: 151 DKYHENSSQEAQVPERYSKSRKNNQQLIT--KGWEESRGKPVA 273
DKY + S+E PERYS S+ N ++L + +EE GK +A
Sbjct: 208 DKYVQFMSREGATPERYSASQVNEERLSAQRRDFEEGTGKTMA 250


>tr|A3U3D4|A3U3D4_9RHOB Putative uncharacterized protein
OS=Oceanicola batsensis HTCC2597 GN=OB2597_18446 PE=4
SV=1
Length = 440

Score = 33.5 bits (75), Expect = 6.4
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +1

Query: 223 QQLITKGWEESRGKPVAVTSPVLEKIRHFESLGGHAREKHEVTADVTQGHLTGDMRQSST 402
++ +++ ++ + + S + E++ HFE L G E EV +GH TGD S
Sbjct: 133 ERFVSQAHRDAEERDLPTGSVIRERLGHFEELTG-GFEFAEVIRRYWEGHETGDDELKSA 191

Query: 403 SSTWMR 420
+ W+R
Sbjct: 192 ALRWLR 197