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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921688
Clone id YMU001_000153_A03
Library
Length 436
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000153_A03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GACTCGTTTTCCTCTCAAGTGGCTCTTTAATCCAGTCCTTCCATTCCCAACCATGAGGGT
GGAGTACTCCCCACACGCCCTCCATCCAAGGCGCAAACTGATGTACCGATTTCTCATGGG
GCTTCCTCTGGAATTCTGGTGAGCTCCACTTAGCTCCACTGTTATGACGACAAAGGTTTC
CAGGCCTAGGCCGCTGAATTGTGTTGCTTTTCTTTCCTACCTGTGAATACTTGAGTTGAT
AATGCTGTCCAAACTTGTTTGCCATTCGGGTTCCCATGCCCTACTGGACAATCTACACTT
GCTGTCGATGTTCGTGTCAAGGATCCCACTCCCTGTACATTCTTCATTCCATTTACCCTT
TAAGCTCGATAAATGCTTTGACTGCATTTCTGAACGAGGACAATCGTGACTTGCCACAAG
GGTCTATGTGCATATG
■■Homology search results ■■ -
sp_hit_id Q8TWQ5
Definition sp|Q8TWQ5|Y977_METKA Uncharacterized glycosyltransferase MK0977 OS=Methanopyrus kandleri
Align length 43
Score (bit) 30.8
E-value 2.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921688|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_A03.
         (436 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8TWQ5|Y977_METKA Uncharacterized glycosyltransferase MK0977 ...    31   2.6  
sp|P04875|VGLM_BUNSH Envelope glycoprotein OS=Bunyavirus snowsho...    30   5.6  
sp|A1U7G1|AMIE_MARAV Aliphatic amidase OS=Marinobacter aquaeolei...    30   5.6  
sp|Q0VN20|AMIE_ALCBS Aliphatic amidase OS=Alcanivorax borkumensi...    29   7.3  
sp|P53866|SQS1_YEAST Protein SQS1 OS=Saccharomyces cerevisiae GN...    29   7.5  
sp|A6ZRL6|SQS1_YEAS7 Protein SQS1 OS=Saccharomyces cerevisiae (s...    29   7.5  
sp|P16264|SPER_STRPU Egg peptide speract receptor OS=Strongyloce...    29   9.8  
sp|A0KIF5|CMOB_AERHH tRNA (mo5U34)-methyltransferase OS=Aeromona...    29   9.8  
sp|P33148|CADHF_XENLA EP-cadherin OS=Xenopus laevis PE=1 SV=2          29   9.8  

>sp|Q8TWQ5|Y977_METKA Uncharacterized glycosyltransferase MK0977
           OS=Methanopyrus kandleri GN=MK0977 PE=3 SV=1
          Length = 344

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +2

Query: 227 ILELIMLSKLVCHSGSHALLDNLHLLSMFVSRIPLPVHSSFHL 355
           +LELI +S +V   G H  L     L   V  +PLP H   H+
Sbjct: 243 LLELIKVSNVVITHGGHTTLSECACLRTPVVSVPLPNHPEQHM 285


>sp|P04875|VGLM_BUNSH Envelope glycoprotein OS=Bunyavirus snowshoe
           hare GN=M PE=1 SV=1
          Length = 1441

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -3

Query: 356 VNGMKNVQGVGSLTRTSTASVDCPVGHGNPNGKQVWTALSTQVFTGRKEK 207
           +   KNV+ V  L+  S  S D  +  G+PNG  V+   S  VF    ++
Sbjct: 746 IKSCKNVKSVVCLSPRSGVSYDSIIACGDPNGPSVYRKPSDGVFQSNADQ 795


>sp|A1U7G1|AMIE_MARAV Aliphatic amidase OS=Marinobacter aquaeolei
           (strain ATCC 700491 / DSM 11845 / VT8) GN=amiE PE=3 SV=1
          Length = 348

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 395 VQKCSQSIYRA*RVNGMKNVQGVGSLTRTSTASVDCPVGHGNPNGKQ 255
           V  C    YR   ++  K  + V ++TR +  + +CPVG    +GK+
Sbjct: 297 VADCPFEFYRTWVMDAQKAQENVEAMTRKTVGTAECPVGELPFDGKE 343


>sp|Q0VN20|AMIE_ALCBS Aliphatic amidase OS=Alcanivorax borkumensis
           (strain SK2 / ATCC 700651 / DSM 11573) GN=amiE PE=3 SV=1
          Length = 348

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -3

Query: 395 VQKCSQSIYRA*RVNGMKNVQGVGSLTRTSTASVDCPVGHGNPNGKQ 255
           +  C    YR   ++  K  + V ++TR++    +CPVG    +GK+
Sbjct: 297 IADCPFDFYRTWVMDAQKAQENVEAMTRSTIGVAECPVGELPVDGKE 343


>sp|P53866|SQS1_YEAST Protein SQS1 OS=Saccharomyces cerevisiae
           GN=SQS1 PE=1 SV=1
          Length = 767

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -1

Query: 274 GTRMANKFGQHYQLKYSQVGKKSNTIQRPRPGNLCRHNSGAKWSSPEF 131
           G +   K  +HY +K S++GK ++T        +       KWSSP +
Sbjct: 624 GNKTVMKIAKHYNMKSSKIGKANHT------SVVVEKIKKTKWSSPNY 665


>sp|A6ZRL6|SQS1_YEAS7 Protein SQS1 OS=Saccharomyces cerevisiae
           (strain YJM789) GN=SQS1 PE=3 SV=1
          Length = 767

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -1

Query: 274 GTRMANKFGQHYQLKYSQVGKKSNTIQRPRPGNLCRHNSGAKWSSPEF 131
           G +   K  +HY +K S++GK ++T        +       KWSSP +
Sbjct: 624 GNKTVMKIAKHYNMKSSKIGKANHT------SVVVEKIKKTKWSSPNY 665


>sp|P16264|SPER_STRPU Egg peptide speract receptor
           OS=Strongylocentrotus purpuratus PE=1 SV=1
          Length = 532

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 121 PHEKSVHQFAPWMEGVWGVLHPHGWEWKD 35
           PHE  V     W +  WG +   GW+W D
Sbjct: 272 PHEGRVEI---WHDDAWGTICDDGWDWAD 297


>sp|A0KIF5|CMOB_AERHH tRNA (mo5U34)-methyltransferase OS=Aeromonas
           hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
           9240) GN=cmoB PE=3 SV=2
          Length = 325

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = -1

Query: 205 NTIQRPRPGNLCRHNS---GAKWSSPEFQRKPHEKSVHQFAPWMEGVWGVLHPH-GWEWK 38
           N + +  PG++  H+    G+  S  E +RK  E  +  F PW +G + V   H   EW+
Sbjct: 47  NKLPQVAPGHIELHSRVEIGSAESLGEGERKKVESLLRHFMPWRKGPFTVHGIHIDTEWR 106

Query: 37  -DW 32
            DW
Sbjct: 107 SDW 109


>sp|P33148|CADHF_XENLA EP-cadherin OS=Xenopus laevis PE=1 SV=2
          Length = 880

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 247 VQTCLPFGFPCPTGQSTLAVDVRVKDPTPCTFFIP 351
           V+   PF  P PT  ST  V V V+D     FF+P
Sbjct: 457 VENAEPFSVPLPT--STATVTVTVEDVNEAPFFVP 489
tr_hit_id Q82PX7
Definition tr|Q82PX7|Q82PX7_STRAW Putative IS630 family IS885-like transposase OS=Streptomyces avermitilis
Align length 23
Score (bit) 34.3
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921688|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_A03.
         (436 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q82PX7|Q82PX7_STRAW Putative IS630 family IS885-like transpos...    34   3.2  
tr|Q824Z1|Q824Z1_STRAW Putative IS630 family IS885-like transpos...    34   3.2  
tr|Q3IHA6|Q3IHA6_PSEHT Putative uncharacterized protein OS=Pseud...    34   4.1  
tr|Q21AY7|Q21AY7_RHOPB Glutamine amidotransferase class-I OS=Rho...    34   4.2  
tr|Q5LMA6|Q5LMA6_SILPO Hydrolase, haloacid delahogenase-like fam...    33   7.1  
tr|A4JLF2|A4JLF2_BURVG Integrase, catalytic region OS=Burkholder...    33   7.1  

>tr|Q82PX7|Q82PX7_STRAW Putative IS630 family IS885-like transposase
           OS=Streptomyces avermitilis GN=SAV745 PE=4 SV=1
          Length = 179

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 79  GVWGVLHPHGWEWKDWIKEPLER 11
           GVW +LH HGW W+   +  LER
Sbjct: 121 GVWRLLHRHGWSWQSPARRALER 143


>tr|Q824Z1|Q824Z1_STRAW Putative IS630 family IS885-like transposase
           OS=Streptomyces avermitilis GN=SAV7570 PE=4 SV=1
          Length = 179

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 79  GVWGVLHPHGWEWKDWIKEPLER 11
           GVW +LH HGW W+   +  LER
Sbjct: 121 GVWRLLHRHGWSWQSPARRALER 143


>tr|Q3IHA6|Q3IHA6_PSEHT Putative uncharacterized protein
           OS=Pseudoalteromonas haloplanktis (strain TAC 125)
           GN=PSHAa1795 PE=4 SV=1
          Length = 668

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
 Frame = -2

Query: 384 QSKHLSSLKGKWNEECT-GSGILDTNIDSKCRLSSRAWEPEWQTSLDSIINS-----SIH 223
           +S  LS L    + +CT G   +D NID+K   S      EWQ  + SIINS     S+ 
Sbjct: 373 KSLTLSHLLSSLDTKCTIGESTIDANIDNKIVFSVE----EWQKIIQSIINSGEVSFSVQ 428

Query: 222 R*ERKATQFSGLGLETF 172
             ++  T+F+    E F
Sbjct: 429 PVKKSNTEFTQCYFEVF 445


>tr|Q21AY7|Q21AY7_RHOPB Glutamine amidotransferase class-I
           OS=Rhodopseudomonas palustris (strain BisB18)
           GN=RPC_0879 PE=4 SV=1
          Length = 245

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -3

Query: 176 PLSS*QWS*VELTRIPEEAP*EIGTSVCALDGGRVGST 63
           P+ + QW   E+TR+PE A    G + CA+   RVGS+
Sbjct: 133 PVETFQWHGAEVTRLPEGAELLAGNAACAVQALRVGSS 170


>tr|Q5LMA6|Q5LMA6_SILPO Hydrolase, haloacid delahogenase-like family
           OS=Silicibacter pomeroyi GN=SPO3657 PE=4 SV=1
          Length = 242

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 94  APWMEGVWGVLHPHGWEWKDWIKEPLERKT 5
           AP + G WGV  PHG EW+    +P E +T
Sbjct: 194 APILAGAWGVYVPHGLEWEIEKADPPEDRT 223


>tr|A4JLF2|A4JLF2_BURVG Integrase, catalytic region OS=Burkholderia
           vietnamiensis (strain G4 / LMG 22486) GN=Bcep1808_4125
           PE=4 SV=1
          Length = 259

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = -1

Query: 196 QRPRPGNLCRHNSGAKWSSPEFQRK 122
           +RP PG LC  + G++++S EFQRK
Sbjct: 146 RRPAPGALCHSDRGSQYASHEFQRK 170