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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921699
Clone id YMU001_000153_B03
Library
Length 532
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000153_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AATCATCCCATCACTTGCTCGTGTTGATGCAACCCCTTCTCCAGGCTCATTTTTAGCCAA
CTGAAACACCTACCAAGTCCCGCAAGCTACTAGACAATCAAACAACAGAGGGACAATCCT
TGCAAAGATTAAACAGTTGGTCATGCTTCAAAGGATCAGAAAGACCATCACAGTTTTCTT
TCAAACTATATCATGCATCAGGATGAAGAGTTCAAACAAAGCCAACAGATTTAGGAGGTA
CAATCAAAAACACCAAATGCTCCACTATTCACACAGCAGAACGTCCTTACAAATGACCAG
ATTACGTACAGAATCAAAAGCAGGCATGTGCCGATACAGACAGCGGCACATACTATTGTT
AATACAGCCATCCGTAATAACTGTAGCCTGAGAGTATACTGCCAAACCTCAACACATGAC
CGGAAAACCACTCGTTGCCTTCCTAAAAGTTTTAGCTCAAGATCCCAAGGCCATCAGACC
AAGTTTAGTATGCAACATGGGCATTTCTGCTTCTGTCCGCATCAAGTTAGAC
■■Homology search results ■■ -
sp_hit_id P11596
Definition sp|P11596|TRSF_DROME Female-specific protein transformer OS=Drosophila melanogaster
Align length 55
Score (bit) 33.9
E-value 0.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921699|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_B03.
         (532 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P11596|TRSF_DROME Female-specific protein transformer OS=Dros...    34   0.50 
sp|Q9GT50|MTH_DROYA G-protein coupled receptor Mth OS=Drosophila...    31   3.2  
sp|P38692|KIC1_YEAST Serine/threonine-protein kinase KIC1 OS=Sac...    31   4.2  
sp|P03179|VP14_EBV Major tegument protein OS=Epstein-Barr virus ...    31   4.3  
sp|A3KMH1|K0564_HUMAN Uncharacterized protein KIAA0564 OS=Homo s...    30   7.3  

>sp|P11596|TRSF_DROME Female-specific protein transformer
           OS=Drosophila melanogaster GN=tra PE=1 SV=1
          Length = 197

 Score = 33.9 bits (76), Expect = 0.50
 Identities = 20/55 (36%), Positives = 33/55 (60%)
 Frame = +2

Query: 182 QTISCIRMKSSNKANRFRRYNQKHQMLHYSHSRTSLQMTRLRTESKAGMCRYRQR 346
           +T S  R +SS + +R RR+ Q+ +  + S SR+S +  R R+ S++   R RQR
Sbjct: 70  RTRSRSRSQSSIRESRHRRHRQRSRSRNRSRSRSSERKRRQRSRSRSSERRRRQR 124


>sp|Q9GT50|MTH_DROYA G-protein coupled receptor Mth OS=Drosophila
           yakuba GN=mth PE=3 SV=2
          Length = 517

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = -3

Query: 413 VEVWQYTLRLQLLRMAVLTIVCAAVCIGTCLLLILYVIWSFVRTFCCVNSGAFGVFDCTS 234
           + V+ +  +LQ L       +C  VC+    LL+L  +W   + F C+ +G  G F   +
Sbjct: 236 ITVYLFVKKLQNLHGKCF--MCYMVCLFMAYLLLLLNLWQMSQNF-CITAGFLGYFFVMA 292

Query: 233 *ICWLCLNS 207
              WL + S
Sbjct: 293 AFLWLSVIS 301


>sp|P38692|KIC1_YEAST Serine/threonine-protein kinase KIC1
            OS=Saccharomyces cerevisiae GN=KIC1 PE=1 SV=1
          Length = 1080

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
 Frame = +3

Query: 57   PTETPTKSRKLLDNQTTEGQSLQRLNSWSCFKGSERPSQFSFKLYHASG*RVQTKP---- 224
            P  TP    KLLD  T   Q+   +   +    +E  +QF F    AS   V   P    
Sbjct: 831  PLPTPVVRNKLLDPNTATSQNNNGMPGSAGISTNENINQFGFNTSSASNIPVSMTPISEK 890

Query: 225  -TDLGGTIKNTK 257
              D GG IK ++
Sbjct: 891  HIDFGGKIKRSQ 902


>sp|P03179|VP14_EBV Major tegument protein OS=Epstein-Barr virus
            (strain B95-8) GN=BNRF1 PE=4 SV=1
          Length = 1318

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
 Frame = +2

Query: 140  VMLQRIRKTITVFFQTISCIRMKSSNKANRFRRYNQKHQMLHYSHS------RTSLQMTR 301
            VML+ +R  +   +   SC+ ++ +N    +   N  HQ+  + HS      R ++   R
Sbjct: 1191 VMLRGLRGCVLPCWVQGSCLGLQFTNLGMPYVLQNA-HQIACHFHSNGTDAWRFAMNYPR 1249

Query: 302  LRTESK--AGMCRYRQRHILLLIQPSVIT 382
              TE    AG+C    RH+ LL  PS+ T
Sbjct: 1250 NPTEQGNIAGLCSRDGRHLALLCDPSLCT 1278


>sp|A3KMH1|K0564_HUMAN Uncharacterized protein KIAA0564 OS=Homo
           sapiens GN=KIAA0564 PE=2 SV=2
          Length = 1905

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
 Frame = +1

Query: 175 FLSNYIMHQDEEFKQSQQI*EVQSKTPNAPLFTQQNVLTNDQITYRIKSRHVPI--QTAA 348
           FL+ +  H  +   +S++I  ++ K PN P      +L+    T++++    P     AA
Sbjct: 599 FLTMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLS---FTHKLRETQDPTAQSLAA 655

Query: 349 HTIVNTAIRNNCSLRVYCQTSTHDRKTTRCLPKSFSS 459
                  +R +  L  Y   + H   T  CL +   S
Sbjct: 656 SLSTRQLLRISRRLSQYPNENLHSAVTKACLSRFLPS 692
tr_hit_id B6NE24
Definition tr|B6NE24|B6NE24_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 65
Score (bit) 34.3
E-value 4.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921699|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_B03.
         (532 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6NE24|B6NE24_BRAFL Putative uncharacterized protein OS=Branc...    34   4.1  
tr|A6CF64|A6CF64_9PLAN 5-oxoprolinase (ATP-hydrolyzing) OS=Planc...    33   7.0  
tr|A0Y2N4|A0Y2N4_9GAMM DNA recombination protein rmuC OS=Alterom...    33   7.0  
tr|A0BSM2|A0BSM2_PARTE Chromosome undetermined scaffold_125, who...    33   7.0  
tr|B0YZF7|B0YZF7_9PARA Phosphoprotein OS=Newcastle disease virus...    33   9.2  

>tr|B6NE24|B6NE24_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_94037 PE=4 SV=1
          Length = 215

 Score = 34.3 bits (77), Expect = 4.1
 Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
 Frame = +1

Query: 244 SKTPNAPLFTQQNVLTNDQITYRIKSRHVPIQTAAHTIVNTAIRNNCSLRV--YCQTSTH 417
           S T N    T  N  +     Y   + H    T  H   +T   NNCS     YC T+TH
Sbjct: 10  SSTTNNDCSTTHNHCSTTAHNYCSTTTHNYCSTTTHNYCSTTTHNNCSTTTHNYCSTTTH 69

Query: 418 DRKTT 432
           +  +T
Sbjct: 70  NNCST 74



 Score = 33.1 bits (74), Expect = 9.2
 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
 Frame = +1

Query: 250 TPNAPLFTQQNVLTNDQITYRIKSRHVPIQTAAHTIVNTAIRNNCSLRV--YCQTSTHDR 423
           T N    T  N  T     Y   + H    T  H   +T   NNCS     YC T+TH+ 
Sbjct: 124 THNYCTTTTHNYCTTTTHNYCSTTTHNYCSTTTHNYCSTTTHNNCSTTTHNYCSTTTHNY 183

Query: 424 KTT 432
            +T
Sbjct: 184 CST 186


>tr|A6CF64|A6CF64_9PLAN 5-oxoprolinase (ATP-hydrolyzing)
           OS=Planctomyces maris DSM 8797 GN=PM8797T_17864 PE=4
           SV=1
          Length = 1288

 Score = 33.5 bits (75), Expect = 7.0
 Identities = 14/47 (29%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +2

Query: 176 FFQTISCIRMKSSNKANRFRRYNQKHQMLH-YSHSRTSLQMTRLRTE 313
           + +T + I++   +  + F R+ Q+HQ L+ Y+H   ++++T +RTE
Sbjct: 628 YLRTDATIQVHCQSGQDEFTRFEQEHQRLYGYTHKSRAIEVTAMRTE 674


>tr|A0Y2N4|A0Y2N4_9GAMM DNA recombination protein rmuC
           OS=Alteromonadales bacterium TW-7 GN=ATW7_00665 PE=4
           SV=1
          Length = 489

 Score = 33.5 bits (75), Expect = 7.0
 Identities = 15/67 (22%), Positives = 34/67 (50%)
 Frame = +2

Query: 110 GTILAKIKQLVMLQRIRKTITVFFQTISCIRMKSSNKANRFRRYNQKHQMLHYSHSRTSL 289
           G +L  +  ++  ++++KTI    Q +S ++ +  NKA +      +H++L +SH     
Sbjct: 21  GVVLYSVIGVLPRRKLKKTINEQQQQLSLLQSQFDNKAEQLSALQDEHELLEHSHQEQRD 80

Query: 290 QMTRLRT 310
           +    +T
Sbjct: 81  EAQHFKT 87


>tr|A0BSM2|A0BSM2_PARTE Chromosome undetermined scaffold_125, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00031771001 PE=4 SV=1
          Length = 312

 Score = 33.5 bits (75), Expect = 7.0
 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 15/96 (15%)
 Frame = +1

Query: 97  IKQQRDNPCKD*TVGHASKDQKDHHSFLSNYIMHQDEEFK---------------QSQQI 231
           I+QQ+ NP K  T     K +KD   +L+  I  Q ++ K               QSQ I
Sbjct: 169 IRQQQFNPIKINTYKSKYKVEKD---YLNEIIFEQRQKEKEVNMLKFTEVNDKQEQSQPI 225

Query: 232 *EVQSKTPNAPLFTQQNVLTNDQITYRIKSRHVPIQ 339
             +   +      TQQN+  N Q  +R+ ++ VP +
Sbjct: 226 KLISEYSQTEGFSTQQNIYRNQQFKHRVFNQKVPFE 261


>tr|B0YZF7|B0YZF7_9PARA Phosphoprotein OS=Newcastle disease virus
           GN=P PE=4 SV=1
          Length = 395

 Score = 33.1 bits (74), Expect = 9.2
 Identities = 28/124 (22%), Positives = 48/124 (38%)
 Frame = +1

Query: 133 TVGHASKDQKDHHSFLSNYIMHQDEEFKQSQQI*EVQSKTPNAPLFTQQNVLTNDQITYR 312
           TVG ++  Q    +  + +  H   +   SQ   + Q +T   P   +Q  L N+     
Sbjct: 33  TVGRSAIPQGKTKALSTAWEKHGSVQPHASQDTPDQQDRTEKQPSTPEQATLHNNP---P 89

Query: 313 IKSRHVPIQTAAHTIVNTAIRNNCSLRVYCQTSTHDRKTTRCLPKSFSSRSQGHQTKFSM 492
           I S  +P   AA    +T ++   S  +         K++       SS  +GH    + 
Sbjct: 90  ITSTELPPTQAASETSDTQLKTGASNSLLSMLDKLSNKSSNAKKGPLSSPQEGHHQPPAQ 149

Query: 493 QHGH 504
           QHG+
Sbjct: 150 QHGN 153