BP921707 |
Clone id |
YMU001_000153_B12 |
Library |
YMU01 |
Length |
380 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000153_B12. |
Accession |
BP921707 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2322Contig1 |
Sequence |
GGAATTACTCTGAAGATCGATATGTACATCCTTGCACATAAACACTGAGCGGTACTGCGA CACAATGCTCTGCAGTCAGCTTAGCAAGCCTATCTTTCTCGGTCTTTCTTTGAACGAAGA CACTATGTGCAGCAGGTATGTCTAACTCCACCAGTTTGGACCAGTGCTTGTAAGTTTTTC GAGCATCTTTTCCATCACAAACACTAGCACAATCAACCTCAAATTTCTGCTGAACGTTTA ACAGGGGGCTCAAAGTAGCCACTGATAGCTCATCACCCTTTCCTTTTAGAAGGTGCAAAA TATCATCATACTGCTTTCGTGTCACCTTCAAAACATGCATGGATTGTGTGCAACCATCAG TATGTATGCAATTGCTGAGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q12830 |
Definition |
sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens |
Align length |
100 |
Score (bit) |
32.7 |
E-value |
0.57 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PA40 |
Definition |
tr|A7PA40|A7PA40_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
99 |
Score (bit) |
43.5 |
E-value |
0.005 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921707|Adiantum capillus-veneris mRNA, clone: YMU001_000153_B12. (380 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PA40|A7PA40_VITVI Chromosome chr14 scaffold_9, whole genome... 44 0.005 tr|A5BSY2|A5BSY2_VITVI Putative uncharacterized protein OS=Vitis... 44 0.005 tr|Q6Z3A7|Q6Z3A7_ORYSJ cDNA clone:J013027P12, full insert sequen... 36 1.1 tr|B8B5S4|B8B5S4_ORYSI Putative uncharacterized protein OS=Oryza... 36 1.1 tr|B4FZ08|B4FZ08_MAIZE Putative uncharacterized protein OS=Zea m... 36 1.1 tr|A3BJG8|A3BJG8_ORYSJ Putative uncharacterized protein OS=Oryza... 36 1.1 tr|A9DUL4|A9DUL4_9FLAO Putative uncharacterized protein OS=Kordi... 34 3.1 tr|B4PWU4|B4PWU4_DROYA Mxc OS=Drosophila yakuba GN=Dyak\mxc PE=4... 34 3.1 tr|Q599M9|Q599M9_9BETA E140 protein OS=Murid herpesvirus 2 GN=e1... 33 5.3 tr|Q6P3G5|Q6P3G5_DANRE Adenosine monophosphate deaminase 1 (Isof... 33 7.0 tr|B3NT90|B3NT90_DROER GG18304 OS=Drosophila erecta GN=GG18304 P... 33 7.0
>tr|A7PA40|A7PA40_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037961001 PE=4 SV=1 Length = 504
Score = 43.5 bits (101), Expect = 0.005 Identities = 23/99 (23%), Positives = 54/99 (54%) Frame = -2
Query: 367 IHTDGCTQSMHVLKVTRKQYDDILHLLKGKGDELSVATLSPLLNVQQKFEVDCASVCDGK 188 IH + M +K+++KQ+ ++ +K G+ + +L+ +L F + V + + Sbjct: 89 IHYGDGAKYMSYIKISKKQHQ-LVKSMKQSGNSIQPRSLNRVLGDLDSFHIRPYEVFEEE 147
Query: 187 DARKTYKHWSKLVELDIPAAHSVFVQRKTEKDRLAKLTA 71 + RK ++HWS+L D+PAA + +++ ++ ++ + A Sbjct: 148 EKRKFHEHWSQLATRDLPAAFANRGKKQLQRRQMTQSLA 186
>tr|A5BSY2|A5BSY2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029912 PE=4 SV=1 Length = 875
Score = 43.5 bits (101), Expect = 0.005 Identities = 23/99 (23%), Positives = 54/99 (54%) Frame = -2
Query: 367 IHTDGCTQSMHVLKVTRKQYDDILHLLKGKGDELSVATLSPLLNVQQKFEVDCASVCDGK 188 IH + M +K+++KQ+ ++ +K G+ + +L+ +L F + V + + Sbjct: 341 IHYGDGAKYMSYIKISKKQHQ-LVKSMKQSGNSIQPRSLNRVLGDLDSFHIRPYEVFEEE 399
Query: 187 DARKTYKHWSKLVELDIPAAHSVFVQRKTEKDRLAKLTA 71 + RK ++HWS+L D+PAA + +++ ++ ++ + A Sbjct: 400 EKRKFHEHWSQLATRDLPAAFANRGKKQLQRRQMTQSLA 438
>tr|Q6Z3A7|Q6Z3A7_ORYSJ cDNA clone:J013027P12, full insert sequence OS=Oryza sativa subsp. japonica GN=P0038F09.34-1 PE=2 SV=1 Length = 353
Score = 35.8 bits (81), Expect = 1.1 Identities = 21/88 (23%), Positives = 41/88 (46%) Frame = -2
Query: 340 MHVLKVTRKQYDDILHLLKGKGDELSVATLSPLLNVQQKFEVDCASVCDGKDARKTYKHW 161 M ++++R Q++ ++ +K GD + L+ ++ KF V + R+ +HW Sbjct: 248 MSYIEISRTQHN-LVKSMKQSGDGIKTKHLTRVIGNLDKFHVKPYGTLIDDEQRRLREHW 306
Query: 160 SKLVELDIPAAHSVFVQRKTEKDRLAKL 77 + DIPAA V + ++L L Sbjct: 307 LNISCNDIPAAFEVLKNNRVTTEKLRNL 334
>tr|B8B5S4|B8B5S4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25893 PE=4 SV=1 Length = 988
Score = 35.8 bits (81), Expect = 1.1 Identities = 21/88 (23%), Positives = 41/88 (46%) Frame = -2
Query: 340 MHVLKVTRKQYDDILHLLKGKGDELSVATLSPLLNVQQKFEVDCASVCDGKDARKTYKHW 161 M ++++R Q++ ++ +K GD + L+ ++ KF V + R+ +HW Sbjct: 309 MSYIEISRTQHN-LVKSMKQSGDGIKTKHLTRVIGNLDKFHVKPYGTLIDDEQRRLREHW 367
Query: 160 SKLVELDIPAAHSVFVQRKTEKDRLAKL 77 + DIPAA V + ++L L Sbjct: 368 LNISCNDIPAAFEVLKNNRVTTEKLRNL 395
>tr|B4FZ08|B4FZ08_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 358
Score = 35.8 bits (81), Expect = 1.1 Identities = 25/88 (28%), Positives = 41/88 (46%) Frame = -2
Query: 340 MHVLKVTRKQYDDILHLLKGKGDELSVATLSPLLNVQQKFEVDCASVCDGKDARKTYKHW 161 M +KV+R Q + I L K GD + +S ++ K V + R+ +HW Sbjct: 246 MSYIKVSRTQLNHIKRL-KQSGDGIQTKHVSRVIGGLDKSHVKPYGALLEDEQRRLREHW 304
Query: 160 SKLVELDIPAAHSVFVQRKTEKDRLAKL 77 ++ D+PAA V +RK ++ KL Sbjct: 305 LEMSCNDLPAAFEVLRERKVLMEKSIKL 332
>tr|A3BJG8|A3BJG8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_023190 PE=4 SV=1 Length = 914
Score = 35.8 bits (81), Expect = 1.1 Identities = 21/88 (23%), Positives = 41/88 (46%) Frame = -2
Query: 340 MHVLKVTRKQYDDILHLLKGKGDELSVATLSPLLNVQQKFEVDCASVCDGKDARKTYKHW 161 M ++++R Q++ ++ +K GD + L+ ++ KF V + R+ +HW Sbjct: 233 MSYIEISRTQHN-LVKSMKQSGDGIKTKHLTRVIGNLDKFHVKPYGTLIDDEQRRLREHW 291
Query: 160 SKLVELDIPAAHSVFVQRKTEKDRLAKL 77 + DIPAA V + ++L L Sbjct: 292 LNISCNDIPAAFEVLKNNRVTTEKLRNL 319
>tr|A9DUL4|A9DUL4_9FLAO Putative uncharacterized protein OS=Kordia algicida OT-1 GN=KAOT1_02812 PE=4 SV=1 Length = 235
Score = 34.3 bits (77), Expect = 3.1 Identities = 13/24 (54%), Positives = 19/24 (79%) Frame = -2
Query: 346 QSMHVLKVTRKQYDDILHLLKGKG 275 +S H+++V RK+ DDILH+ GKG Sbjct: 22 ESRHIVRVLRKKEDDILHITNGKG 45
>tr|B4PWU4|B4PWU4_DROYA Mxc OS=Drosophila yakuba GN=Dyak\mxc PE=4 SV=1 Length = 595
Score = 34.3 bits (77), Expect = 3.1 Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 6/108 (5%) Frame = -2
Query: 370 CIHTDGCTQSMHVLKVTRKQYDDILHLLKGKGDELSVATL-SPLLNVQQKFEVDCAS--- 203 C + CT ++ LK +QY DI ++ +GD++++ L +P + +V+CA Sbjct: 476 CTLLEPCT-NVKELKADMRQYPDIKYVDIKEGDQVALLRLGTPAAAEEFVRQVNCAERQL 534
Query: 202 -VCDGKDARKTYKHWSKLVE-LDIPAAHSVFVQRKTEKDRLAKLTAEH 65 V G+ +W K+ + + + V VQ+K ++++AKL A+H Sbjct: 535 KVLSGQQETL---YWRKIEQDREAKLSKKVRVQQKRGREKVAKLLAKH 579
>tr|Q599M9|Q599M9_9BETA E140 protein OS=Murid herpesvirus 2 GN=e140 PE=4 SV=1 Length = 463
Score = 33.5 bits (75), Expect = 5.3 Identities = 17/58 (29%), Positives = 29/58 (50%) Frame = -2
Query: 196 DGKDARKTYKHWSKLVELDIPAAHSVFVQRKTEKDRLAKLTAEHCVAVPLSVYVQGCT 23 +G + +W ++ DIP +V V + D+LA+ HC ++ +VYV CT Sbjct: 108 EGTELAVCMGNWGRIYVYDIPEDAAVLVA--VDLDKLARFGLIHCESIYRTVYVPNCT 163
>tr|Q6P3G5|Q6P3G5_DANRE Adenosine monophosphate deaminase 1 (Isoform M) OS=Danio rerio GN=ampd1 PE=2 SV=1 Length = 717
Score = 33.1 bits (74), Expect = 7.0 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 5/76 (6%) Frame = -2
Query: 367 IHTDGCTQSMHVLKVTRKQY----DDILHLLKGKGDELSVATLSPLLNVQ-QKFEVDCAS 203 IH C H+L+ +K Y D ++H+LKGK E+++ L LN+ VD Sbjct: 275 IHAAACMNQKHLLRFIKKSYRVDADRVVHVLKGK--EVTLKELFASLNLHPYDLTVDSLD 332
Query: 202 VCDGKDARKTYKHWSK 155 V G R+T++ + K Sbjct: 333 VHAG---RQTFQRFDK 345
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