| Report |
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| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921708|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_C01.
(495 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A5BSM7|A5BSM7_VITVI Putative uncharacterized protein OS=Vitis... 77 3e-25
tr|A7QGI3|A7QGI3_VITVI Chromosome undetermined scaffold_92, whol... 77 3e-25
tr|A5AQH0|A5AQH0_VITVI Putative uncharacterized protein OS=Vitis... 77 4e-23
tr|A7QGI8|A7QGI8_VITVI Chromosome undetermined scaffold_92, whol... 77 4e-23
tr|B3H5N7|B3H5N7_ARATH Uncharacterized protein At1g33980.2 OS=Ar... 73 2e-22
tr|Q1SL19|Q1SL19_MEDTR Nonsense-mediated decay UPF3 OS=Medicago ... 69 3e-17
tr|A9RK13|A9RK13_PHYPA Predicted protein OS=Physcomitrella paten... 57 6e-17
tr|A9TJU8|A9TJU8_PHYPA Predicted protein OS=Physcomitrella paten... 80 5e-14
tr|A7QC83|A7QC83_VITVI Chromosome undetermined scaffold_77, whol... 78 2e-13
tr|Q7XQG3|Q7XQG3_ORYSJ OJ000114_01.14 protein OS=Oryza sativa su... 76 1e-12
tr|Q0JD00|Q0JD00_ORYSJ Os04g0440100 protein OS=Oryza sativa subs... 76 1e-12
tr|Q01K74|Q01K74_ORYSA H0525C06.10 protein OS=Oryza sativa GN=H0... 76 1e-12
tr|B8AU35|B8AU35_ORYSI Putative uncharacterized protein OS=Oryza... 76 1e-12
tr|A3AU56|A3AU56_ORYSJ Putative uncharacterized protein OS=Oryza... 76 1e-12
tr|Q9FX10|Q9FX10_ARATH F12G12.20 protein OS=Arabidopsis thaliana... 75 2e-12
tr|Q9FVW4|Q9FVW4_ARATH Putative uncharacterized protein T15K4.3 ... 75 2e-12
tr|B7Q7R2|B7Q7R2_IXOSC Regulator of nonsense transcripts 3B, put... 52 8e-10
tr|Q3ULJ3|Q3ULJ3_MOUSE Putative uncharacterized protein OS=Mus m... 55 2e-09
tr|Q9CUH6|Q9CUH6_MOUSE Putative uncharacterized protein (Fragmen... 55 2e-09
tr|Q8CCF7|Q8CCF7_MOUSE Putative uncharacterized protein OS=Mus m... 55 2e-09
tr|Q9CTQ4|Q9CTQ4_MOUSE Putative uncharacterized protein (Fragmen... 55 2e-09
tr|B3MCL9|B3MCL9_DROAN GF12056 OS=Drosophila ananassae GN=GF1205... 47 4e-09
tr|Q2F5U6|Q2F5U6_BOMMO Upf3 regulator of nonsense transcripts-li... 54 5e-09
tr|Q5I0C8|Q5I0C8_RAT UPF3 regulator of nonsense transcripts homo... 55 5e-09
tr|Q7Q545|Q7Q545_ANOGA AGAP006649-PA OS=Anopheles gambiae GN=AGA... 52 7e-09
tr|Q4R3M2|Q4R3M2_MACFA Testis cDNA clone: QtsA-15960, similar to... 55 7e-09
tr|Q4VBI8|Q4VBI8_DANRE Upf3a protein (Fragment) OS=Danio rerio G... 60 7e-08
tr|B0S733|B0S733_DANRE Novel protein similar to vertebrate UPF3 ... 60 7e-08
tr|Q4RWE6|Q4RWE6_TETNG Chromosome 2 SCAF14990, whole genome shot... 58 2e-07
tr|Q17EN9|Q17EN9_AEDAE Putative uncharacterized protein (Fragmen... 47 3e-07
>tr|A5BSM7|A5BSM7_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_042717 PE=4 SV=1
Length = 437
Score = 77.4 bits (189), Expect(2) = 3e-25
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +2
Query: 359 SFSRAYIDFKHPEDVLDFYQCFNGHVFVNEKGTQFKALVEYAPNQ 493
S+SRAY+DFK PEDV++F + F+GHVFVNEKGTQFK +VEYAP+Q
Sbjct: 127 SYSRAYLDFKRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQ 171
Score = 60.8 bits (146), Expect(2) = 3e-25
Identities = 27/47 (57%), Positives = 36/47 (76%)
Frame = +1
Query: 205 MRDVYNRTKVVVRHLPPGLSESAFMEQIASRFSSMYNMVSFCPGKSS 345
M+ +RTKV+VRHLPP +SE+AF+EQI + F Y +V FCPGK+S
Sbjct: 76 MKGPLDRTKVMVRHLPPMISEAAFLEQIDTVFKERYTLVKFCPGKNS 122
>tr|A7QGI3|A7QGI3_VITVI Chromosome undetermined scaffold_92, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00038330001 PE=4 SV=1
Length = 357
Score = 77.4 bits (189), Expect(2) = 3e-25
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +2
Query: 359 SFSRAYIDFKHPEDVLDFYQCFNGHVFVNEKGTQFKALVEYAPNQ 493
S+SRAY+DFK PEDV++F + F+GHVFVNEKGTQFK +VEYAP+Q
Sbjct: 52 SYSRAYLDFKRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQ 96
Score = 60.8 bits (146), Expect(2) = 3e-25
Identities = 27/47 (57%), Positives = 36/47 (76%)
Frame = +1
Query: 205 MRDVYNRTKVVVRHLPPGLSESAFMEQIASRFSSMYNMVSFCPGKSS 345
M+ +RTKV+VRHLPP +SE+AF+EQI + F Y +V FCPGK+S
Sbjct: 1 MKGPLDRTKVMVRHLPPMISEAAFLEQIDTVFKERYTLVKFCPGKNS 47
>tr|A5AQH0|A5AQH0_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_035617 PE=4 SV=1
Length = 355
Score = 77.4 bits (189), Expect(2) = 4e-23
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +2
Query: 359 SFSRAYIDFKHPEDVLDFYQCFNGHVFVNEKGTQFKALVEYAPNQ 493
S+SRAY+DFK PEDV++F + F+GHVFVNEKGTQFK +VEYAP+Q
Sbjct: 52 SYSRAYLDFKRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQ 96
Score = 53.9 bits (128), Expect(2) = 4e-23
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +1
Query: 205 MRDVYNRTKVVVRHLPPGLSESAFMEQIASRFSSMYNMVSFCPGKSS 345
M+ +RTKV+VRHLPP + E+AF+EQI + F Y +V F PGK+S
Sbjct: 1 MKGPLDRTKVMVRHLPPMILEAAFLEQINTVFKGRYTLVKFRPGKNS 47
>tr|A7QGI8|A7QGI8_VITVI Chromosome undetermined scaffold_92, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00038335001 PE=4 SV=1
Length = 347
Score = 77.4 bits (189), Expect(2) = 4e-23
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +2
Query: 359 SFSRAYIDFKHPEDVLDFYQCFNGHVFVNEKGTQFKALVEYAPNQ 493
S+SRAY+DFK PEDV++F + F+GHVFVNEKGTQFK +VEYAP+Q
Sbjct: 52 SYSRAYLDFKRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQ 96
Score = 53.9 bits (128), Expect(2) = 4e-23
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +1
Query: 205 MRDVYNRTKVVVRHLPPGLSESAFMEQIASRFSSMYNMVSFCPGKSS 345
M+ +RTKV+VRHLPP + E+AF+EQI + F Y +V F PGK+S
Sbjct: 1 MKGPLDRTKVMVRHLPPMILEAAFLEQINTVFKGRYTLVKFRPGKNS 47
>tr|B3H5N7|B3H5N7_ARATH Uncharacterized protein At1g33980.2
OS=Arabidopsis thaliana GN=At1g33980 PE=4 SV=1
Length = 484
Score = 73.2 bits (178), Expect(2) = 2e-22
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +2
Query: 350 KCSSFSRAYIDFKHPEDVLDFYQCFNGHVFVNEKGTQFKALVEYAPNQ 493
K +SRAY+ FK PEDV +F FNGHVFVNEKG QFKA+VEYAP+Q
Sbjct: 51 KNQKYSRAYVSFKAPEDVYEFAAFFNGHVFVNEKGAQFKAIVEYAPSQ 98
Score = 55.5 bits (132), Expect(2) = 2e-22
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +1
Query: 205 MRDVYNRTKVVVRHLPPGLSESAFMEQIASRFSSMYNMVSFCPGKSSI 348
M++ + KVVVRHLPP LS+S + QI RF+ YN VSF PGKS +
Sbjct: 1 MKEPLQKKKVVVRHLPPSLSQSDLLSQIDPRFADRYNWVSFRPGKSRL 48
>tr|Q1SL19|Q1SL19_MEDTR Nonsense-mediated decay UPF3 OS=Medicago
truncatula GN=MtrDRAFT_AC140549g44v2 PE=4 SV=1
Length = 500
Score = 68.6 bits (166), Expect(2) = 3e-17
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Frame = +2
Query: 317 WFPFVLVNP--VSKCSSFSRAYIDFKHPEDVLDFYQCFNGHVFVNEKGTQFKALVEYAPN 490
WF F +P ++ + SRAYIDF P+DV+DF FNGH+F+N+KGT FK VEYAP+
Sbjct: 35 WFSF---HPPKITSHNHTSRAYIDFNTPDDVIDFAHFFNGHLFLNQKGTHFKVTVEYAPS 91
Query: 491 Q 493
Q
Sbjct: 92 Q 92
Score = 43.1 bits (100), Expect(2) = 3e-17
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +1
Query: 220 NRTKVVVRHLPPGLSESAFMEQIASRFSSMYNMVSFCPGK 339
+RTKVV+RHLPP +++ + + I S F+ YN SF P K
Sbjct: 3 DRTKVVIRHLPPTITQDSLLPLIDSSFAGRYNWFSFHPPK 42
>tr|A9RK13|A9RK13_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_159550 PE=4 SV=1
Length = 987
Score = 56.6 bits (135), Expect(2) = 6e-17
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +2
Query: 362 FSRAYIDFKHPEDVLDFYQCFNGHVFVNEKGTQF 463
+SRAYI+FK PEDV+DFY+ FNGHVFVNE+ F
Sbjct: 104 YSRAYINFKKPEDVIDFYEDFNGHVFVNERVMDF 137
Score = 53.9 bits (128), Expect(2) = 6e-17
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +1
Query: 202 AMRDVYNRTKVVVRHLPPGLSESAFMEQIASRFSSMYNMVSFCPGKS 342
AM++ RTKV VRHLPP LSE+ F +QIA +++ Y S+ PGK+
Sbjct: 25 AMKEQQARTKVAVRHLPPSLSEAVFQDQIAGKYAGAYTWWSYHPGKN 71
>tr|A9TJU8|A9TJU8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_170493 PE=4 SV=1
Length = 1124
Score = 80.1 bits (196), Expect = 5e-14
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = +2
Query: 314 TWFPFVLVNPVSKCSSFSRAYIDFKHPEDVLDFYQCFNGHVFVNEKGTQFKALVEYAPNQ 493
TW+ + K +SRAYI+FK PEDV+DFY+ FNGHVFVNE+G Q+KALVEYAP Q
Sbjct: 62 TWWSYHPGKSSHKRQVYSRAYINFKKPEDVIDFYEDFNGHVFVNERGAQYKALVEYAPYQ 121
Score = 50.4 bits (119), Expect = 5e-05
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +1
Query: 205 MRDVYNRTKVVVRHLPPGLSESAFMEQIASRFSSMYNMVSFCPGKSSIKV*QFFTSLHRF 384
M++ RTKV VRHLPP L+ + F +QIA +++ Y S+ PGKSS K + + F
Sbjct: 26 MKEQQARTKVSVRHLPPSLAWAVFQDQIAVKYAGTYTWWSYHPGKSSHKRQVYSRAYINF 85
Query: 385 QAP 393
+ P
Sbjct: 86 KKP 88
>tr|A7QC83|A7QC83_VITVI Chromosome undetermined scaffold_77, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00035287001 PE=4 SV=1
Length = 519
Score = 78.2 bits (191), Expect = 2e-13
Identities = 34/48 (70%), Positives = 42/48 (87%)
Frame = +2
Query: 350 KCSSFSRAYIDFKHPEDVLDFYQCFNGHVFVNEKGTQFKALVEYAPNQ 493
K S+SRAY+DFK PEDV++F + F+GHVFVNEKGTQFK +VEYAP+Q
Sbjct: 49 KRQSYSRAYLDFKRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQ 96
Score = 58.9 bits (141), Expect = 1e-07
Identities = 30/63 (47%), Positives = 41/63 (65%)
Frame = +1
Query: 205 MRDVYNRTKVVVRHLPPGLSESAFMEQIASRFSSMYNMVSFCPGKSSIKV*QFFTSLHRF 384
M+ +RTKVVVRHLPP +SE+AF+EQI + F Y +V F PGK+S K + + F
Sbjct: 1 MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60
Query: 385 QAP 393
+ P
Sbjct: 61 KRP 63
>tr|Q7XQG3|Q7XQG3_ORYSJ OJ000114_01.14 protein OS=Oryza sativa
subsp. japonica GN=OJ000114_01.14 PE=4 SV=1
Length = 455
Score = 75.9 bits (185), Expect = 1e-12
Identities = 36/59 (61%), Positives = 43/59 (72%)
Frame = +2
Query: 317 WFPFVLVNPVSKCSSFSRAYIDFKHPEDVLDFYQCFNGHVFVNEKGTQFKALVEYAPNQ 493
W F N K +SR Y++FK PEDV++F + FNGHVFVNEKG QFKALVEYAP+Q
Sbjct: 45 WSCFRPGNASQKNHRYSRLYLNFKGPEDVVEFAEVFNGHVFVNEKGAQFKALVEYAPSQ 103
Score = 51.6 bits (122), Expect = 2e-05
Identities = 26/69 (37%), Positives = 41/69 (59%)
Frame = +1
Query: 187 AGAAAAMRDVYNRTKVVVRHLPPGLSESAFMEQIASRFSSMYNMVSFCPGKSSIKV*QFF 366
A A A ++D +RTKVV+R LPP +++ A +EQ+ +RF Y+ F PG +S K ++
Sbjct: 2 AAARAHVKDPAHRTKVVLRRLPPAIAQQAVVEQVDARFGGRYDWSCFRPGNASQKNHRYS 61
Query: 367 TSLHRFQAP 393
F+ P
Sbjct: 62 RLYLNFKGP 70
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