BP921709 |
Clone id |
YMU001_000153_C02 |
Library |
YMU01 |
Length |
617 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000153_C02. |
Accession |
BP921709 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3992Contig1 |
Sequence |
AGGTTATAGCGTTACAAATAGATAGCCCAGCTCGGCACCTCTTGAGTTTTCGCCAACAAT GCACTGTTAATCACCGAGCTCTGCAAAAGCTCTTTTTCCTCAATCTCTGTATGAGCTACC TGTTCCTTTGAAGTTGCACATGCCTTCAAGATGGAAGCAGACGTGTGAGCATTGGGAGGA ACTTTCTCAACTTGCATCAAATCAAAACACGCCAGCTTGACCTTCACTTCCTACTCCTCA TGATCCAGAGTGGTTGGTTGCCCAACCCCTTGTATTGCAGCATTTATTTCACAAGTGTTA GACATAACATCCATACCATCATGAATACCGGCATTCTCTTTACCTAGCAAAGACAAGTCA CTATCCTTGCAAACCACACACTCATCACAAGTCTAATACATACTGTTATGTCTATCTTGC TCTACATGCCGGATTGCCAGCTTATGAGGCTCACCATGCTTCTCATGCCAAATTGGCATC AAGCCCCTAATCGCATTGCAATGCTTAAGATCAGCACTTGAGACCTTATCCTCTGCATTC TCTTCATCATCAAGGCTATCAGCATCATGATCAGCCCCTTGCTTTTCCGTGCCCGCTATG GAGTACCTGCAGGTAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8VYH0 |
Definition |
sp|Q8VYH0|PP313_ARATH Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana |
Align length |
59 |
Score (bit) |
33.5 |
E-value |
0.9 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A8N4A5 |
Definition |
tr|A8N4A5|A8N4A5_COPC7 Predicted protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) |
Align length |
75 |
Score (bit) |
37.4 |
E-value |
0.71 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921709|Adiantum capillus-veneris mRNA, clone: YMU001_000153_C02. (617 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A8N4A5|A8N4A5_COPC7 Predicted protein OS=Coprinopsis cinerea ... 37 0.71 tr|Q4UC39|Q4UC39_THEAN Putative uncharacterized protein OS=Theil... 36 1.6 tr|Q4MZV7|Q4MZV7_THEPA Putative uncharacterized protein OS=Theil... 36 2.1 tr|Q1E2B9|Q1E2B9_COCIM Putative uncharacterized protein OS=Cocci... 35 3.5 tr|A7P9U0|A7P9U0_VITVI Chromosome chr14 scaffold_9, whole genome... 35 4.6 tr|A5BE39|A5BE39_VITVI Putative uncharacterized protein OS=Vitis... 35 4.6 tr|B4K720|B4K720_DROMO GI22850 OS=Drosophila mojavensis GN=GI228... 35 4.6 tr|Q53ED5|Q53ED5_9NEOB NADH-ubiquinone oxidoreductase chain 2 OS... 32 4.7 tr|A5BUK5|A5BUK5_VITVI Putative uncharacterized protein OS=Vitis... 34 6.0 tr|Q5DAV3|Q5DAV3_SCHJA Putative uncharacterized protein OS=Schis... 34 6.0 tr|B4L7X0|B4L7X0_DROMO GI11033 OS=Drosophila mojavensis GN=GI110... 34 6.0 tr|A5AP42|A5AP42_VITVI Putative uncharacterized protein OS=Vitis... 34 7.8 tr|Q7RFJ8|Q7RFJ8_PLAYO Putative uncharacterized protein PY04708 ... 34 7.8
>tr|A8N4A5|A8N4A5_COPC7 Predicted protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_13334 PE=4 SV=1 Length = 385
Score = 37.4 bits (85), Expect = 0.71 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%) Frame = +2
Query: 206 NTPA*PSLPTPHDPEWLVAQPLVLQHLFHKC*T*HPY--HHEYRHSLYLAKTSHYPCKPH 379 +TP P P P P+ + HL + HPY HH + H + HYP PH Sbjct: 168 STPTYP--PPPGSPDLGAPASPTIAHLQQQ----HPYPFHHHHHHPA----SPHYPASPH 217
Query: 380 THHKSNTYCYVYLAL 424 +H+ S+ + + L+L Sbjct: 218 SHYHSHYHSHAALSL 232
>tr|Q4UC39|Q4UC39_THEAN Putative uncharacterized protein OS=Theileria annulata GN=TA04350 PE=4 SV=1 Length = 559
Score = 36.2 bits (82), Expect = 1.6 Identities = 28/79 (35%), Positives = 36/79 (45%) Frame = -1
Query: 308 VMSNTCEINAAIQGVGQPTTLDHEE*EVKVKLACFDLMQVEKVPPNAHTSASILKACATS 129 V NT I+G GQ LD + F LMQ + V PN T SI+ ACA Sbjct: 207 VKPNTIMYTTLIKGYGQNKQLDKA-------MRIFRLMQQDGVEPNTVTYNSIIDACARV 259
Query: 128 KEQVAHTEIEEKELLQSSV 72 E + T + E E+L S + Sbjct: 260 GEMGSATRLLE-EMLSSGI 277
>tr|Q4MZV7|Q4MZV7_THEPA Putative uncharacterized protein OS=Theileria parva GN=TP03_0402 PE=4 SV=1 Length = 596
Score = 35.8 bits (81), Expect = 2.1 Identities = 27/79 (34%), Positives = 36/79 (45%) Frame = -1
Query: 308 VMSNTCEINAAIQGVGQPTTLDHEE*EVKVKLACFDLMQVEKVPPNAHTSASILKACATS 129 V NT I+G GQ LD + F LMQ + V PN T S++ ACA Sbjct: 236 VKPNTIMYTTLIKGYGQNKQLDKA-------MRIFRLMQQDGVQPNTVTYNSVIDACARV 288
Query: 128 KEQVAHTEIEEKELLQSSV 72 E + T + E E+L S + Sbjct: 289 GEMNSATRLLE-EMLSSGI 306
>tr|Q1E2B9|Q1E2B9_COCIM Putative uncharacterized protein OS=Coccidioides immitis GN=CIMG_03294 PE=4 SV=1 Length = 1559
Score = 35.0 bits (79), Expect = 3.5 Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Frame = +2
Query: 113 ELPV-PLKLHMPSRWKQTCEHWEELSQLASNQNTPA*PSLPTP---HDPEW 253 +LP+ P K P RW T W L S N P P L TP HDPEW Sbjct: 461 DLPITPSKTMDPKRWSPTKASW-----LESALNKPEFPRLKTPKTPHDPEW 506
>tr|A7P9U0|A7P9U0_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037848001 PE=4 SV=1 Length = 885
Score = 34.7 bits (78), Expect = 4.6 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = -1
Query: 215 LACFDLMQVEKVPPNAHTSASILKACATS----KEQVAHTEIEEKELLQSSVINSALL 54 L FD M VE + PN T AS+L ACA S + H +EEK + ++ +AL+ Sbjct: 264 LELFDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALV 321
>tr|A5BE39|A5BE39_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013371 PE=4 SV=1 Length = 476
Score = 34.7 bits (78), Expect = 4.6 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = -1
Query: 215 LACFDLMQVEKVPPNAHTSASILKACATS----KEQVAHTEIEEKELLQSSVINSALL 54 L FD M VE + PN T AS+L ACA S + H +EEK + ++ +AL+ Sbjct: 214 LELFDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALV 271
>tr|B4K720|B4K720_DROMO GI22850 OS=Drosophila mojavensis GN=GI22850 PE=4 SV=1 Length = 773
Score = 34.7 bits (78), Expect = 4.6 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Frame = -1
Query: 302 SNTCEINAAIQGVGQPTTLDHEE*EVKVKLACFDLMQVEKVPPNAHTSASILKACATSKE 123 SN E A QGV +P TLD E E V++ + Q+E V A ++ +A +E Sbjct: 177 SNNNEQTEAAQGVREPKTLDAEANEAPVQVE--EAKQIENVEQPAKEEIAV-EAEQVKEE 233
Query: 122 QVAHTE--IEEKELLQSSVINSALLAKT 45 + A TE E+KE Q +N +A++ Sbjct: 234 KTAETETAAEKKENEQPLAVNQPEVAES 261
>tr|Q53ED5|Q53ED5_9NEOB NADH-ubiquinone oxidoreductase chain 2 OS=Craugastor montanus GN=ND2 PE=3 SV=1 Length = 351
Score = 32.0 bits (71), Expect(2) = 4.7 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%) Frame = +3
Query: 393 LIHTVMSILLYMPDCQLMRLTML-----LMPNWHQAPNRIAMLKIST*DLILCILFII 551 L+ T++S+ YM M LTML MP WH P +A + I+ +L +L +I Sbjct: 283 LLSTLLSLFFYMRLVYTMTLTMLPNLAYSMPIWHPQPLTLAAIPITLSIFMLALLPLI 340
Score = 20.8 bits (42), Expect(2) = 4.7 Identities = 6/13 (46%), Positives = 9/13 (69%) Frame = +2
Query: 245 PEWLVAQPLVLQH 283 P+W+ Q +V QH Sbjct: 262 PKWMATQEMVKQH 274
>tr|A5BUK5|A5BUK5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032470 PE=4 SV=1 Length = 694
Score = 34.3 bits (77), Expect = 6.0 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 4/90 (4%) Frame = -1
Query: 311 DVMSNTCEINAAIQGVGQPTTLDHEE*EVKVKLACFDLMQVEKVPPNAHTSASILKACAT 132 DV+S I A +QG G P + L F M+ + V PN T +L ACA Sbjct: 201 DVVSWNSMITAFVQG-GCP----------EEALELFQEMETQNVKPNGITMVGVLSACAK 249
Query: 131 SKE----QVAHTEIEEKELLQSSVINSALL 54 + + H+ IE + +S +++A+L Sbjct: 250 KSDFEFGRWVHSYIERNRIXESLTLSNAML 279
>tr|Q5DAV3|Q5DAV3_SCHJA Putative uncharacterized protein OS=Schistosoma japonicum PE=2 SV=1 Length = 230
Score = 34.3 bits (77), Expect = 6.0 Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 1/86 (1%) Frame = +2
Query: 164 CEHWEELSQLASNQNTPA*PSLPTPHDPEWLVAQPLVLQHLFHKC*-T*HPYHHEYRHSL 340 C + + S SN+++ S P L + V H H C H +HH YRH Sbjct: 55 CLPYHDHSSFHSNRHSSHFRSCRHHTSPHILCHKSRVHHHNHHHCNHRHHHFHHHYRHHN 114
Query: 341 YLAKTSHYPCKPHTHHKSNTYCYVYL 418 L H+ H HH + + + YL Sbjct: 115 NLDHHIHHHRHHHIHHHHSYHHHSYL 140
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