BP921709
Clone id YMU001_000153_C02
Library
Length 617
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000153_C02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGGTTATAGCGTTACAAATAGATAGCCCAGCTCGGCACCTCTTGAGTTTTCGCCAACAAT
GCACTGTTAATCACCGAGCTCTGCAAAAGCTCTTTTTCCTCAATCTCTGTATGAGCTACC
TGTTCCTTTGAAGTTGCACATGCCTTCAAGATGGAAGCAGACGTGTGAGCATTGGGAGGA
ACTTTCTCAACTTGCATCAAATCAAAACACGCCAGCTTGACCTTCACTTCCTACTCCTCA
TGATCCAGAGTGGTTGGTTGCCCAACCCCTTGTATTGCAGCATTTATTTCACAAGTGTTA
GACATAACATCCATACCATCATGAATACCGGCATTCTCTTTACCTAGCAAAGACAAGTCA
CTATCCTTGCAAACCACACACTCATCACAAGTCTAATACATACTGTTATGTCTATCTTGC
TCTACATGCCGGATTGCCAGCTTATGAGGCTCACCATGCTTCTCATGCCAAATTGGCATC
AAGCCCCTAATCGCATTGCAATGCTTAAGATCAGCACTTGAGACCTTATCCTCTGCATTC
TCTTCATCATCAAGGCTATCAGCATCATGATCAGCCCCTTGCTTTTCCGTGCCCGCTATG
GAGTACCTGCAGGTAAT
■■Homology search results ■■ -
sp_hit_id Q8VYH0
Definition sp|Q8VYH0|PP313_ARATH Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana
Align length 59
Score (bit) 33.5
E-value 0.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921709|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_C02.
(617 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8VYH0|PP313_ARATH Pentatricopeptide repeat-containing protei... 33 0.90
sp|Q8MP30|Y7791_DICDI Uncharacterized histidine-rich protein DDB... 33 1.5
sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protei... 32 2.0
sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containi... 32 2.6
sp|P31973|FENR_SYNP2 Ferredoxin--NADP reductase OS=Synechococcus... 32 2.6
sp|Q1ZXC2|PABPA_DICDI Polyadenylate-binding protein 1-A OS=Dicty... 32 3.4
sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5 ... 32 3.4
sp|Q02930|CREB5_HUMAN cAMP-responsive element-binding protein 5 ... 32 3.4
sp|P33441|MFT1_YEAST THO complex subunit MFT1 OS=Saccharomyces c... 31 4.5
sp|O43310|K0427_HUMAN Uncharacterized protein KIAA0427 OS=Homo s... 31 4.5
sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protei... 31 5.8
sp|Q06523|YP148_YEAST Uncharacterized protein YPR148C OS=Sacchar... 30 7.6
sp|Q5E9Y5|DOM3Z_BOVIN Protein Dom3Z OS=Bos taurus GN=DOM3Z PE=2 ... 30 7.6
sp|Q7M732|RTL1_MOUSE Retrotransposon-like protein 1 OS=Mus muscu... 30 9.9
sp|Q4G386|MIND_EMIHU Putative septum site-determining protein mi... 30 9.9
sp|O77932|DOM3Z_HUMAN Protein Dom3Z OS=Homo sapiens GN=DOM3Z PE=... 30 9.9

>sp|Q8VYH0|PP313_ARATH Pentatricopeptide repeat-containing protein
At4g15720 OS=Arabidopsis thaliana GN=PCMP-H1 PE=2 SV=1
Length = 616

Score = 33.5 bits (75), Expect = 0.90
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Frame = -1

Query: 215 LACFDLMQVEK-VPPNAHTSASILKACATSKE----QVAHTEIEEKELLQSSVINSALL 54
L+ F M ++ VPPN +T AS+ KAC+ E + H +E L ++ V++S+L+
Sbjct: 115 LSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLV 173


>sp|Q8MP30|Y7791_DICDI Uncharacterized histidine-rich protein
DDB0167791 OS=Dictyostelium discoideum GN=DDB_G0274557
PE=4 SV=1
Length = 233

Score = 32.7 bits (73), Expect = 1.5
Identities = 29/130 (22%), Positives = 42/130 (32%)
Frame = +2

Query: 206 NTPA*PSLPTPHDPEWLVAQPLVLQHLFHKC*T*HPYHHEYRHSLYLAKTSHYPCKPHTH 385
N P P+ PH+P P HL H H +HH + H + H+P PH H
Sbjct: 45 NNPHNPN-NNPHNPHNPNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHH 103

Query: 386 HKSNTYCYVYLALHAGLPAYEXXXXXXXXXXXXXXXXCNA*DQHLRPYPLHSLHHQGYQH 565
+ + + + H + H + H HH + H
Sbjct: 104 PHHHHHPHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHH 151

Query: 566 HDQPLAFPCP 595
H P P P
Sbjct: 152 HHHPHHHPHP 161


>sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protein
At1g71420 OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1
Length = 745

Score = 32.3 bits (72), Expect = 2.0
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Frame = -1

Query: 206 FDLMQVEKVPPNAHTSASILKACA---TSKEQVA-HTEIEEKELLQSSVINSALL 54
F ++ EK+ P+ +T +S+LKACA T++ ++ H ++ + L +V+N++L+
Sbjct: 357 FGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLI 411


>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing
protein At3g47840 OS=Arabidopsis thaliana GN=PCMP-E43
PE=3 SV=1
Length = 706

Score = 32.0 bits (71), Expect = 2.6
Identities = 39/163 (23%), Positives = 64/163 (39%), Gaps = 8/163 (4%)
Frame = -1

Query: 596 AGTEKQGADHDADSLDDEENAEDKVSSADLKHCNAIRGLMPIWHEKHGEPHKLAIRHVEQ 417
AG K+G + ++ EE ++ + LK C GL + + K H + V
Sbjct: 187 AGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC---AGLRQVKYGKAIHTHVIVRGFVT- 242

Query: 416 DRHNSMY*TCDECVVCKDSDLSLLGKENAGIHDGMDVMSNTCE--------INAAIQGVG 261
+C + L+ + E + DG+ + N E + A + +G
Sbjct: 243 -------------TLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG 289

Query: 260 QPTTLDHEE*EVKVKLACFDLMQVEKVPPNAHTSASILKACAT 132
Q EVK + F M+ +VPPN T AS+ ACA+
Sbjct: 290 Q---------EVKA-VETFIKMRNSQVPPNEQTFASMFSACAS 322


>sp|P31973|FENR_SYNP2 Ferredoxin--NADP reductase OS=Synechococcus
sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=petH PE=1
SV=1
Length = 402

Score = 32.0 bits (71), Expect = 2.6
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1

Query: 524 VSSADLKHCNAIR-GLMPIWHEKHGEPHKLAIRHVEQDRHNSM 399
+S DL++ G++P +K+G+PHKL + + RH M
Sbjct: 149 ISEGDLRYLEGQSIGIIPPGEDKNGKPHKLRLYSIASTRHGDM 191


>sp|Q1ZXC2|PABPA_DICDI Polyadenylate-binding protein 1-A
OS=Dictyostelium discoideum GN=pabp1A PE=3 SV=1
Length = 814

Score = 31.6 bits (70), Expect = 3.4
Identities = 30/137 (21%), Positives = 48/137 (35%), Gaps = 9/137 (6%)
Frame = +2

Query: 185 SQLASNQNTPA*PSLPTPHDPEWLVAQPLVLQHLFHKC*T*HPYH---HEYRHSLYLAKT 355
S +S P +P ++ +A P H+ HP+H H +H Y+
Sbjct: 28 SSSSSVATQPPQSQIPPQPQYQYQMAPPPQTHHV-------HPHHVHPHHQQHPGYVPSH 80

Query: 356 SHYPCKPHTHHKS-----NTYCYVYLALHAG-LPAYEXXXXXXXXXXXXXXXXCNA*DQH 517
H+ + H HH N + ++ H G +P++ QH
Sbjct: 81 HHHHQQHHHHHPHHVGVPNLHHSIHQQQHPGYVPSHHHHQQQHHHHQHQHQHH-----QH 135

Query: 518 LRPYPLHSLHHQGYQHH 568
H HHQ +QHH
Sbjct: 136 QHHQHQHHQHHQHHQHH 152


>sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5
OS=Mus musculus GN=Creb5 PE=2 SV=3
Length = 357

Score = 31.6 bits (70), Expect = 3.4
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2

Query: 308 HPYHHEYRHSLYLAKTSHYPCKPHTHHKSNTYCYVYLALHAGLP 439
HPY H+++H + + + H HH S+++ + + A H P
Sbjct: 137 HPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSP 180


>sp|Q02930|CREB5_HUMAN cAMP-responsive element-binding protein 5
OS=Homo sapiens GN=CREB5 PE=1 SV=2
Length = 508

Score = 31.6 bits (70), Expect = 3.4
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2

Query: 308 HPYHHEYRHSLYLAKTSHYPCKPHTHHKSNTYCYVYLALHAGLP 439
HPY H+++H + + + H HH S+++ + + A H P
Sbjct: 288 HPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSP 331


>sp|P33441|MFT1_YEAST THO complex subunit MFT1 OS=Saccharomyces
cerevisiae GN=MFT1 PE=1 SV=1
Length = 392

Score = 31.2 bits (69), Expect = 4.5
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -1

Query: 587 EKQGADHDADSLDDEENAED---KVSSADLKHCNAIRG 483
EK+ +DH+ D +DEEN E+ +V D+K N + G
Sbjct: 293 EKEESDHEYDDQEDEENEEEDDMEVDVEDIKEDNEVDG 330


>sp|O43310|K0427_HUMAN Uncharacterized protein KIAA0427 OS=Homo
sapiens GN=KIAA0427 PE=1 SV=1
Length = 598

Score = 31.2 bits (69), Expect = 4.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1

Query: 590 TEKQGADHDADSLDDEENAEDKVSSADLKHCNAIRGLMPIWHEKHGEPHKLAIRHVEQ 417
T KQ H +D E + K+ D + N I ++P W H PH++ I H ++
Sbjct: 132 TPKQPLPH----IDREGCGKGKLEDGDGINLNDIEKVLPAWQGYHPMPHEVEIAHTKK 185


tr_hit_id A8N4A5
Definition tr|A8N4A5|A8N4A5_COPC7 Predicted protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003)
Align length 75
Score (bit) 37.4
E-value 0.71
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921709|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_C02.
(617 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8N4A5|A8N4A5_COPC7 Predicted protein OS=Coprinopsis cinerea ... 37 0.71
tr|Q4UC39|Q4UC39_THEAN Putative uncharacterized protein OS=Theil... 36 1.6
tr|Q4MZV7|Q4MZV7_THEPA Putative uncharacterized protein OS=Theil... 36 2.1
tr|Q1E2B9|Q1E2B9_COCIM Putative uncharacterized protein OS=Cocci... 35 3.5
tr|A7P9U0|A7P9U0_VITVI Chromosome chr14 scaffold_9, whole genome... 35 4.6
tr|A5BE39|A5BE39_VITVI Putative uncharacterized protein OS=Vitis... 35 4.6
tr|B4K720|B4K720_DROMO GI22850 OS=Drosophila mojavensis GN=GI228... 35 4.6
tr|Q53ED5|Q53ED5_9NEOB NADH-ubiquinone oxidoreductase chain 2 OS... 32 4.7
tr|A5BUK5|A5BUK5_VITVI Putative uncharacterized protein OS=Vitis... 34 6.0
tr|Q5DAV3|Q5DAV3_SCHJA Putative uncharacterized protein OS=Schis... 34 6.0
tr|B4L7X0|B4L7X0_DROMO GI11033 OS=Drosophila mojavensis GN=GI110... 34 6.0
tr|A5AP42|A5AP42_VITVI Putative uncharacterized protein OS=Vitis... 34 7.8
tr|Q7RFJ8|Q7RFJ8_PLAYO Putative uncharacterized protein PY04708 ... 34 7.8

>tr|A8N4A5|A8N4A5_COPC7 Predicted protein OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_13334 PE=4
SV=1
Length = 385

Score = 37.4 bits (85), Expect = 0.71
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2

Query: 206 NTPA*PSLPTPHDPEWLVAQPLVLQHLFHKC*T*HPY--HHEYRHSLYLAKTSHYPCKPH 379
+TP P P P P+ + HL + HPY HH + H + HYP PH
Sbjct: 168 STPTYP--PPPGSPDLGAPASPTIAHLQQQ----HPYPFHHHHHHPA----SPHYPASPH 217

Query: 380 THHKSNTYCYVYLAL 424
+H+ S+ + + L+L
Sbjct: 218 SHYHSHYHSHAALSL 232


>tr|Q4UC39|Q4UC39_THEAN Putative uncharacterized protein
OS=Theileria annulata GN=TA04350 PE=4 SV=1
Length = 559

Score = 36.2 bits (82), Expect = 1.6
Identities = 28/79 (35%), Positives = 36/79 (45%)
Frame = -1

Query: 308 VMSNTCEINAAIQGVGQPTTLDHEE*EVKVKLACFDLMQVEKVPPNAHTSASILKACATS 129
V NT I+G GQ LD + F LMQ + V PN T SI+ ACA
Sbjct: 207 VKPNTIMYTTLIKGYGQNKQLDKA-------MRIFRLMQQDGVEPNTVTYNSIIDACARV 259

Query: 128 KEQVAHTEIEEKELLQSSV 72
E + T + E E+L S +
Sbjct: 260 GEMGSATRLLE-EMLSSGI 277


>tr|Q4MZV7|Q4MZV7_THEPA Putative uncharacterized protein
OS=Theileria parva GN=TP03_0402 PE=4 SV=1
Length = 596

Score = 35.8 bits (81), Expect = 2.1
Identities = 27/79 (34%), Positives = 36/79 (45%)
Frame = -1

Query: 308 VMSNTCEINAAIQGVGQPTTLDHEE*EVKVKLACFDLMQVEKVPPNAHTSASILKACATS 129
V NT I+G GQ LD + F LMQ + V PN T S++ ACA
Sbjct: 236 VKPNTIMYTTLIKGYGQNKQLDKA-------MRIFRLMQQDGVQPNTVTYNSVIDACARV 288

Query: 128 KEQVAHTEIEEKELLQSSV 72
E + T + E E+L S +
Sbjct: 289 GEMNSATRLLE-EMLSSGI 306


>tr|Q1E2B9|Q1E2B9_COCIM Putative uncharacterized protein
OS=Coccidioides immitis GN=CIMG_03294 PE=4 SV=1
Length = 1559

Score = 35.0 bits (79), Expect = 3.5
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +2

Query: 113 ELPV-PLKLHMPSRWKQTCEHWEELSQLASNQNTPA*PSLPTP---HDPEW 253
+LP+ P K P RW T W L S N P P L TP HDPEW
Sbjct: 461 DLPITPSKTMDPKRWSPTKASW-----LESALNKPEFPRLKTPKTPHDPEW 506


>tr|A7P9U0|A7P9U0_VITVI Chromosome chr14 scaffold_9, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00037848001
PE=4 SV=1
Length = 885

Score = 34.7 bits (78), Expect = 4.6
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -1

Query: 215 LACFDLMQVEKVPPNAHTSASILKACATS----KEQVAHTEIEEKELLQSSVINSALL 54
L FD M VE + PN T AS+L ACA S + H +EEK + ++ +AL+
Sbjct: 264 LELFDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALV 321


>tr|A5BE39|A5BE39_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_013371 PE=4 SV=1
Length = 476

Score = 34.7 bits (78), Expect = 4.6
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -1

Query: 215 LACFDLMQVEKVPPNAHTSASILKACATS----KEQVAHTEIEEKELLQSSVINSALL 54
L FD M VE + PN T AS+L ACA S + H +EEK + ++ +AL+
Sbjct: 214 LELFDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALV 271


>tr|B4K720|B4K720_DROMO GI22850 OS=Drosophila mojavensis GN=GI22850
PE=4 SV=1
Length = 773

Score = 34.7 bits (78), Expect = 4.6
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = -1

Query: 302 SNTCEINAAIQGVGQPTTLDHEE*EVKVKLACFDLMQVEKVPPNAHTSASILKACATSKE 123
SN E A QGV +P TLD E E V++ + Q+E V A ++ +A +E
Sbjct: 177 SNNNEQTEAAQGVREPKTLDAEANEAPVQVE--EAKQIENVEQPAKEEIAV-EAEQVKEE 233

Query: 122 QVAHTE--IEEKELLQSSVINSALLAKT 45
+ A TE E+KE Q +N +A++
Sbjct: 234 KTAETETAAEKKENEQPLAVNQPEVAES 261


>tr|Q53ED5|Q53ED5_9NEOB NADH-ubiquinone oxidoreductase chain 2
OS=Craugastor montanus GN=ND2 PE=3 SV=1
Length = 351

Score = 32.0 bits (71), Expect(2) = 4.7
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +3

Query: 393 LIHTVMSILLYMPDCQLMRLTML-----LMPNWHQAPNRIAMLKIST*DLILCILFII 551
L+ T++S+ YM M LTML MP WH P +A + I+ +L +L +I
Sbjct: 283 LLSTLLSLFFYMRLVYTMTLTMLPNLAYSMPIWHPQPLTLAAIPITLSIFMLALLPLI 340



Score = 20.8 bits (42), Expect(2) = 4.7
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2

Query: 245 PEWLVAQPLVLQH 283
P+W+ Q +V QH
Sbjct: 262 PKWMATQEMVKQH 274


>tr|A5BUK5|A5BUK5_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_032470 PE=4 SV=1
Length = 694

Score = 34.3 bits (77), Expect = 6.0
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = -1

Query: 311 DVMSNTCEINAAIQGVGQPTTLDHEE*EVKVKLACFDLMQVEKVPPNAHTSASILKACAT 132
DV+S I A +QG G P + L F M+ + V PN T +L ACA
Sbjct: 201 DVVSWNSMITAFVQG-GCP----------EEALELFQEMETQNVKPNGITMVGVLSACAK 249

Query: 131 SKE----QVAHTEIEEKELLQSSVINSALL 54
+ + H+ IE + +S +++A+L
Sbjct: 250 KSDFEFGRWVHSYIERNRIXESLTLSNAML 279


>tr|Q5DAV3|Q5DAV3_SCHJA Putative uncharacterized protein
OS=Schistosoma japonicum PE=2 SV=1
Length = 230

Score = 34.3 bits (77), Expect = 6.0
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +2

Query: 164 CEHWEELSQLASNQNTPA*PSLPTPHDPEWLVAQPLVLQHLFHKC*-T*HPYHHEYRHSL 340
C + + S SN+++ S P L + V H H C H +HH YRH
Sbjct: 55 CLPYHDHSSFHSNRHSSHFRSCRHHTSPHILCHKSRVHHHNHHHCNHRHHHFHHHYRHHN 114

Query: 341 YLAKTSHYPCKPHTHHKSNTYCYVYL 418
L H+ H HH + + + YL
Sbjct: 115 NLDHHIHHHRHHHIHHHHSYHHHSYL 140