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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921711
Clone id YMU001_000153_C04
Library
Length 535
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000153_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CACAACCATTACATCATGAAGCCTTCCAAAAATCATACACAATTACAACCACCTTCTAAG
AGACCTGGTAGAATGAACTTTATAAAGAGCAAATCCTTGGCTTGTAAAAACCTCGCTCTA
ATACAAAAATGGCCACAGAAAATGCTCCAAGGGTAGAAGTGTACAAGCAATGACCCCACC
TGCAACACTTACAGAGAGATGTCCCTCTCTTCCTGGACACAATAATTGGTTTCCAGACTG
CAAACATTAGAGGCGTATCATTGTCGAAACCCCCTGCCAAAAATTGTGCGCGCACCCTGA
TTTTAACTTACCTCGAGCTGTGAGTCATATTGATATATATAGAAATTATCAGACCATCAT
CAAGCTTTGTGACTCATGTACCTCTGGCTTGTAGCAGCAACATAGCCCCTTCCAAACAAC
CCGCTCGGCAGAGCTCGCCTTGCACGACTCACAGCTCAATTAGGGGTTCTTTGCCATACA
AACCTCCATGATTTGTGTCTTTATTTTTTCTCTTCTTCACAGTATACGCCTCACT
■■Homology search results ■■ -
sp_hit_id Q99932
Definition sp|Q99932|SPAG8_HUMAN Sperm-associated antigen 8 OS=Homo sapiens
Align length 47
Score (bit) 31.6
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921711|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_C04.
         (535 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99932|SPAG8_HUMAN Sperm-associated antigen 8 OS=Homo sapiens...    32   2.5  
sp|A5GVG4|IF2_SYNR3 Translation initiation factor IF-2 OS=Synech...    30   5.6  
sp|A8G9L7|ISPH_SERP5 4-hydroxy-3-methylbut-2-enyl diphosphate re...    30   9.7  

>sp|Q99932|SPAG8_HUMAN Sperm-associated antigen 8 OS=Homo sapiens
           GN=SPAG8 PE=1 SV=2
          Length = 426

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
 Frame = +3

Query: 357 SSSFVTHVPLACSSNIAPSKQPARQSSPCT----THSSIRGSLPYKP 485
           +++  T  P  CS  + PS  P+    PC     TH+   GSL ++P
Sbjct: 69  AAALSTKTPAPCSEFMEPSSDPSLLGEPCAGPGFTHNIAHGSLGFEP 115


>sp|A5GVG4|IF2_SYNR3 Translation initiation factor IF-2
           OS=Synechococcus sp. (strain RCC307) GN=infB PE=3 SV=1
          Length = 1106

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +3

Query: 351 RPSSSFVTHVPLACSSNIAPSKQPARQSSPCTTHSSIRGSLPYKPP 488
           RP +      P+  S   AP  +PAR  +P       R ++P +PP
Sbjct: 206 RPPARPAAKPPVVMSKPTAPPPRPARPGAPAPRRDQNRPAVPMRPP 251


>sp|A8G9L7|ISPH_SERP5 4-hydroxy-3-methylbut-2-enyl diphosphate
           reductase OS=Serratia proteamaculans (strain 568)
           GN=ispH PE=3 SV=1
          Length = 317

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -1

Query: 373 VTKLDDGLIISIYINMTHS-SR*VKIRVRAQFLAGGFDNDTPLMFAVWKPIIVSRKRGTS 197
           +T++ DG   SI I   H  S+ V+   +A+ L   FD   PL+  V   +  + +RGT 
Sbjct: 60  ITEVPDG---SILIFSAHGVSQAVRAEAKARDLTMLFDATCPLVTKVHMEVARASRRGTE 116

Query: 196 LCKCCRWGHCLYTSTLGAFS 137
                  GH     T+G +S
Sbjct: 117 AILIGHAGHPEVEGTMGQYS 136
tr_hit_id A9AMK1
Definition tr|A9AMK1|A9AMK1_BURM1 Putative uncharacterized protein OS=Burkholderia multivorans (strain ATCC 17616 / 249)
Align length 73
Score (bit) 37.0
E-value 0.65
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921711|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_C04.
         (535 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9AMK1|A9AMK1_BURM1 Putative uncharacterized protein OS=Burkh...    37   0.65 
tr|Q1BQS5|Q1BQS5_BURCA Putative uncharacterized protein OS=Burkh...    37   0.85 
tr|A4JJM6|A4JJM6_BURVG Putative uncharacterized protein OS=Burkh...    37   0.85 
tr|A0B2U0|A0B2U0_BURCH Putative uncharacterized protein OS=Burkh...    37   0.85 
tr|Q14VN0|Q14VN0_9VIRU ORF100 OS=Ranid herpesvirus 1 PE=4 SV=1         36   1.4  
tr|B1K684|B1K684_BURCC Putative uncharacterized protein OS=Burkh...    36   1.4  
tr|A2W342|A2W342_9BURK Putative uncharacterized protein OS=Burkh...    36   1.4  
tr|A2WGG2|A2WGG2_9BURK Putative uncharacterized protein OS=Burkh...    35   1.9  
tr|Q0FY20|Q0FY20_9RHIZ Putative pqq dehydrogenase protein OS=Ful...    33   9.3  

>tr|A9AMK1|A9AMK1_BURM1 Putative uncharacterized protein
           OS=Burkholderia multivorans (strain ATCC 17616 / 249)
           GN=BMULJ_05046 PE=4 SV=1
          Length = 380

 Score = 37.0 bits (84), Expect = 0.65
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = +2

Query: 89  ANPWLVKTSL*YKNGHRKCSKGRSVQAMTPPATLTERCPSLPGHNNWFPDCKH*RRIIVE 268
           A P +  +SL +    R+C  GR V  +  P  LTER  SLP H  + P  +  +R+ V 
Sbjct: 144 AIPQIAPSSLPFLQSLRRCP-GRVVPFVWDPMFLTERAQSLPEHGEYRPRGERGKRLTVM 202

Query: 269 TP---CQKLCAHP 298
            P     K C +P
Sbjct: 203 EPNHDVVKFCVYP 215


>tr|Q1BQS5|Q1BQS5_BURCA Putative uncharacterized protein
           OS=Burkholderia cenocepacia (strain AU 1054)
           GN=Bcen_3134 PE=4 SV=1
          Length = 380

 Score = 36.6 bits (83), Expect = 0.85
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = +2

Query: 89  ANPWLVKTSL*YKNGHRKCSKGRSVQAMTPPATLTERCPSLPGHNNWFPDCKH*RRIIVE 268
           A P +  +SL +    R+C  GR V  +  P  LTER  SLP H  + P  +  +R+ V 
Sbjct: 144 AIPQIAPSSLPFLQSLRRCP-GRVVPFVWDPMFLTERARSLPEHGEYRPRSEPGKRLTVM 202

Query: 269 TP---CQKLCAHP 298
            P     K C +P
Sbjct: 203 EPNHDVVKFCVYP 215


>tr|A4JJM6|A4JJM6_BURVG Putative uncharacterized protein
           OS=Burkholderia vietnamiensis (strain G4 / LMG 22486)
           GN=Bcep1808_3491 PE=4 SV=1
          Length = 380

 Score = 36.6 bits (83), Expect = 0.85
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = +2

Query: 89  ANPWLVKTSL*YKNGHRKCSKGRSVQAMTPPATLTERCPSLPGHNNWFPDCKH*RRIIVE 268
           A P +  +SL +    R+C  GR V  +  P  +TER   LPGH  + P  +  +R+ V 
Sbjct: 144 AIPQIAPSSLPFLQSLRRCP-GRVVPFVWDPMFVTERAAVLPGHGEYRPRTEPGKRLTVM 202

Query: 269 TP---CQKLCAHP 298
            P     K C +P
Sbjct: 203 EPNHDVVKFCVYP 215


>tr|A0B2U0|A0B2U0_BURCH Putative uncharacterized protein
           OS=Burkholderia cenocepacia (strain HI2424)
           GN=Bcen2424_5233 PE=4 SV=1
          Length = 380

 Score = 36.6 bits (83), Expect = 0.85
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = +2

Query: 89  ANPWLVKTSL*YKNGHRKCSKGRSVQAMTPPATLTERCPSLPGHNNWFPDCKH*RRIIVE 268
           A P +  +SL +    R+C  GR V  +  P  LTER  SLP H  + P  +  +R+ V 
Sbjct: 144 AIPQIAPSSLPFLQSLRRCP-GRVVPFVWDPMFLTERARSLPEHGEYRPRSEPGKRLTVM 202

Query: 269 TP---CQKLCAHP 298
            P     K C +P
Sbjct: 203 EPNHDVVKFCVYP 215


>tr|Q14VN0|Q14VN0_9VIRU ORF100 OS=Ranid herpesvirus 1 PE=4 SV=1
          Length = 556

 Score = 35.8 bits (81), Expect = 1.4
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +2

Query: 272 PCQKLCAHPDFNLPRAVSHIDIYRNYQTI---IKLCDSCT 382
           PC  L  H D ++PRAVS+    R  Q +   +KLC++CT
Sbjct: 482 PCAGLWHHRDLSIPRAVSYAVANRTEQALMDKVKLCETCT 521


>tr|B1K684|B1K684_BURCC Putative uncharacterized protein
           OS=Burkholderia cenocepacia (strain MC0-3)
           GN=Bcenmc03_5039 PE=4 SV=1
          Length = 380

 Score = 35.8 bits (81), Expect = 1.4
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = +2

Query: 89  ANPWLVKTSL*YKNGHRKCSKGRSVQAMTPPATLTERCPSLPGHNNWFPDCKH*RRIIVE 268
           A P +  +SL +    R+C  GR V  +  P  LTER  SLP H  + P  +  +R+ V 
Sbjct: 144 AIPQIAPSSLPFLQSLRRCP-GRVVPFVWDPMFLTERARSLPEHGEYRPRGEPGKRLTVM 202

Query: 269 TP---CQKLCAHP 298
            P     K C +P
Sbjct: 203 EPNHDVVKFCVYP 215


>tr|A2W342|A2W342_9BURK Putative uncharacterized protein
           OS=Burkholderia cenocepacia PC184 GN=BCPG_04776 PE=4
           SV=1
          Length = 380

 Score = 35.8 bits (81), Expect = 1.4
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = +2

Query: 89  ANPWLVKTSL*YKNGHRKCSKGRSVQAMTPPATLTERCPSLPGHNNWFPDCKH*RRIIVE 268
           A P +  +SL +    R+C  GR V  +  P  LTER  SLP H  + P  +  +R+ V 
Sbjct: 144 AIPQIAPSSLPFLQSLRRCP-GRVVPFVWDPMFLTERARSLPEHGEYRPRGEPGKRLTVM 202

Query: 269 TP---CQKLCAHP 298
            P     K C +P
Sbjct: 203 EPNHDVVKFCVYP 215


>tr|A2WGG2|A2WGG2_9BURK Putative uncharacterized protein
           OS=Burkholderia dolosa AUO158 GN=BDAG_03875 PE=4 SV=1
          Length = 380

 Score = 35.4 bits (80), Expect = 1.9
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = +2

Query: 89  ANPWLVKTSL*YKNGHRKCSKGRSVQAMTPPATLTERCPSLPGHNNWFPDCKH*RRIIVE 268
           A P +  +SL +    R+C  GR V  +  P  +TER  SLP H  + P  +  +R+ V 
Sbjct: 144 AIPQIAPSSLPFLQSLRRCP-GRVVPFVWDPMFVTERARSLPEHGEYRPRGERAKRLTVM 202

Query: 269 TP---CQKLCAHP 298
            P     K C +P
Sbjct: 203 EPNHNVVKFCVYP 215


>tr|Q0FY20|Q0FY20_9RHIZ Putative pqq dehydrogenase protein
           OS=Fulvimarina pelagi HTCC2506 GN=FP2506_17639 PE=4 SV=1
          Length = 643

 Score = 33.1 bits (74), Expect = 9.3
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 185 TLTERCPSLPGHNNWFPDCKH*RRIIVETPCQKLCA 292
           T+TE CP+ PG  +W P     R  ++  P Q LCA
Sbjct: 390 TITEICPAPPGAKDWQPTAYSPRTKLLYVPHQTLCA 425