BP921713
Clone id YMU001_000153_C06
Library
Length 558
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000153_C06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTCATCTTCTGCTTCAATAGGTATATCTCTGTCATGGGATGGGAGAGGTTCGACCTCGAG
AGTGGATGGAACGATCATCTTCTCTTCTTCTGCAGGAGAGGCACTCACTTCCTCAACTGC
AAGGGGGACTACCTCAGGAACCAAGGGAGTAGTAGTAACAGCTACTTCCTCTGCACCAGC
AACAACTGGTGTCTCTATAATAGCGGGCACCTCTCCAAACAGGTCCCCTTCTGCCTTCAC
TTCCTTTTCCTCTTCTTTGGCTGCATCCTCTACCTCTGCTGACACCTCTTTATTTTCTTC
CTCCTCTGCCTTCCCCAAGTCTCCCTCCGTACTTGCAACAGTAGTTGCTGCCTTGGGAGG
AGGCGCTAAGAATGAATTGTTCTTGATTGCGTCTGCAATCTTAGATTTAAGATCCTGAAG
GGCTCTCTTCTCCGACTCCTTCAAGTCTTTGACATAGTAGCTCTCTTCTACAAAAGGGGC
AGCAGCAGGCTCCTCGTCTATTGGAGGGATGAGCTCTCTGTTCTCCACCACGGTCTTCTC
CTCTGCCTTCTCCACGGC
■■Homology search results ■■ -
sp_hit_id Q94C59
Definition sp|Q94C59|PATL4_ARATH Patellin-4 OS=Arabidopsis thaliana
Align length 44
Score (bit) 45.8
E-value 0.0001
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921713|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_C06.
(558 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q94C59|PATL4_ARATH Patellin-4 OS=Arabidopsis thaliana GN=PATL... 46 1e-04
sp|Q56ZI2|PATL2_ARATH Patellin-2 OS=Arabidopsis thaliana GN=PATL... 44 7e-04
sp|Q56Z59|PATL3_ARATH Patellin-3 OS=Arabidopsis thaliana GN=PATL... 35 0.25

>sp|Q94C59|PATL4_ARATH Patellin-4 OS=Arabidopsis thaliana GN=PATL4
PE=1 SV=2
Length = 540

Score = 45.8 bits (107), Expect = 1e-04
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = -1

Query: 474 FVEESYYVKDLKESEKRALQDLKSKIADAIKNNSFLAPPPKAAT 343
F EES + DLKESEK+AL DLKSK+ +AI +N+ L K ++
Sbjct: 54 FKEESDFFADLKESEKKALSDLKSKLEEAIVDNTLLKTKKKESS 97


>sp|Q56ZI2|PATL2_ARATH Patellin-2 OS=Arabidopsis thaliana GN=PATL2
PE=1 SV=2
Length = 683

Score = 43.5 bits (101), Expect = 7e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1

Query: 474 FVEESYYVKDLKESEKRALQDLKSKIADAIKNNSFLAPPPKAA 346
F EE Y +L+E+EK AL +LK + +A+ F APPP A
Sbjct: 80 FKEEGYLASELQEAEKNALAELKELVREALNKREFTAPPPPPA 122


>sp|Q56Z59|PATL3_ARATH Patellin-3 OS=Arabidopsis thaliana GN=PATL3
PE=2 SV=2
Length = 490

Score = 35.0 bits (79), Expect = 0.25
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -1

Query: 474 FVEESYYVKDLKESEKRALQDLKSKIADAIKNNSFLAPP 358
F EES + DL SEK++L +LK + +A+ N+ F P
Sbjct: 109 FKEESSKLSDLSNSEKKSLDELKHLVREALDNHQFTNTP 147


tr_hit_id B8LQX3
Definition tr|B8LQX3|B8LQX3_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 35
Score (bit) 44.7
E-value 0.003
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921713|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_C06.
(558 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LQX3|B8LQX3_PICSI Putative uncharacterized protein OS=Picea... 45 0.003
tr|A7QLX0|A7QLX0_VITVI Chromosome chr18 scaffold_122, whole geno... 43 0.010
tr|A5ASS1|A5ASS1_VITVI Putative uncharacterized protein OS=Vitis... 43 0.010
tr|A7QD42|A7QD42_VITVI Chromosome undetermined scaffold_80, whol... 42 0.017
tr|A5BL92|A5BL92_VITVI Putative uncharacterized protein OS=Vitis... 42 0.017
tr|A5ASS0|A5ASS0_VITVI Putative uncharacterized protein OS=Vitis... 42 0.030
tr|Q2Q0V7|Q2Q0V7_CUCPE Patellin 1 OS=Cucurbita pepo GN=PATL1 PE=... 39 0.15
tr|B4FBC9|B4FBC9_MAIZE Putative uncharacterized protein OS=Zea m... 39 0.25
tr|B6TVE3|B6TVE3_MAIZE Patellin-1 OS=Zea mays PE=2 SV=1 38 0.33
tr|B5JAD9|B5JAD9_9RHOB Poly(R)-hydroxyalkanoic acid synthase, cl... 37 0.95
tr|Q8RYZ1|Q8RYZ1_ORYSJ cDNA clone:J033015J08, full insert sequen... 36 1.2
tr|Q5N8X1|Q5N8X1_ORYSJ Cytosolic factor-like protein OS=Oryza sa... 36 1.2
tr|A3A041|A3A041_ORYSJ Putative uncharacterized protein OS=Oryza... 36 1.2
tr|A2WXH7|A2WXH7_ORYSI Putative uncharacterized protein OS=Oryza... 36 1.2
tr|B6TB19|B6TB19_MAIZE Patellin-5 OS=Zea mays PE=2 SV=1 35 2.8
tr|A7Q4T0|A7Q4T0_VITVI Chromosome chr10 scaffold_50, whole genom... 35 2.8
tr|A5BW68|A5BW68_VITVI Putative uncharacterized protein OS=Vitis... 35 2.8
tr|A7QFG3|A7QFG3_VITVI Chromosome chr8 scaffold_88, whole genome... 35 3.6
tr|B5K709|B5K709_9RHOB Poly-beta-hydroxybutyrate polymerase OS=O... 34 4.7
tr|Q652I7|Q652I7_ORYSJ Os06g0671800 protein OS=Oryza sativa subs... 34 4.7
tr|A2YG28|A2YG28_ORYSI Putative uncharacterized protein OS=Oryza... 34 4.7
tr|Q86KU7|Q86KU7_DICDI Similar to triglyceride lipase-cholestero... 34 6.2
tr|Q5TKJ2|Q5TKJ2_ORYSJ Os05g0429400 protein OS=Oryza sativa subs... 33 8.1
tr|B8AYI6|B8AYI6_ORYSI Putative uncharacterized protein OS=Oryza... 33 8.1

>tr|B8LQX3|B8LQX3_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 592

Score = 44.7 bits (104), Expect = 0.003
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = -1

Query: 474 FVEESYYVKDLKESEKRALQDLKSKIADAIKNNSF 370
F EES +V DLKESE++ALQ+LK +I +AI N F
Sbjct: 75 FKEESNFVSDLKESERKALQELKCRIEEAILKNEF 109


>tr|A7QLX0|A7QLX0_VITVI Chromosome chr18 scaffold_122, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00001819001
PE=4 SV=1
Length = 606

Score = 43.1 bits (100), Expect = 0.010
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = -1

Query: 474 FVEESYYVKDLKESEKRALQDLKSKIADAIKNNSFLAPPP 355
F EES V DL ES+++AL++LK + +A++ + F APPP
Sbjct: 86 FKEESNVVGDLPESQRKALEELKVLVREALEKHEFTAPPP 125


>tr|A5ASS1|A5ASS1_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_013163 PE=4 SV=1
Length = 595

Score = 43.1 bits (100), Expect = 0.010
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = -1

Query: 474 FVEESYYVKDLKESEKRALQDLKSKIADAIKNNSFLAPPP 355
F EES V DL ES+++AL++LK + +A++ + F APPP
Sbjct: 86 FKEESNVVGDLPESQRKALEELKVLVREALEKHEFTAPPP 125


>tr|A7QD42|A7QD42_VITVI Chromosome undetermined scaffold_80, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00035683001 PE=4 SV=1
Length = 564

Score = 42.4 bits (98), Expect = 0.017
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = -1

Query: 474 FVEESYYVKDLKESEKRALQDLKSKIADAIKNNSFLAPPPKAA 346
F EES DLK+ EK+AL DL+SKI DAI++N+ K A
Sbjct: 87 FQEESNLPSDLKDLEKKALLDLRSKIEDAIRSNTLFEEEKKQA 129


>tr|A5BL92|A5BL92_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_019134 PE=4 SV=1
Length = 564

Score = 42.4 bits (98), Expect = 0.017
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = -1

Query: 474 FVEESYYVKDLKESEKRALQDLKSKIADAIKNNSFLAPPPKAA 346
F EES DLK+ EK+AL DL+SKI DAI++N+ K A
Sbjct: 87 FQEESNLPSDLKDLEKKALLDLRSKIEDAIRSNTLFEEEKKQA 129


>tr|A5ASS0|A5ASS0_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_013162 PE=4 SV=1
Length = 591

Score = 41.6 bits (96), Expect = 0.030
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 8/51 (15%)
Frame = -1

Query: 474 FVEESYYVKDLKESEKRALQDLKSKIADAIKNNSFLA--------PPPKAA 346
F EES + DL ESE+RAL++LK + +A++N F + PPP++A
Sbjct: 80 FKEESNRLADLSESERRALEELKQSVQEALRNGIFTSQPQPPPPPPPPQSA 130


>tr|Q2Q0V7|Q2Q0V7_CUCPE Patellin 1 OS=Cucurbita pepo GN=PATL1 PE=2
SV=1
Length = 604

Score = 39.3 bits (90), Expect = 0.15
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -1

Query: 474 FVEESYYVKDLKESEKRALQDLKSKIADAIKNNSFLAPP 358
F EES V +L ES+++AL DLK I +A+ + F APP
Sbjct: 82 FKEESNVVGELPESQRKALADLKVLIQEALNKHEFTAPP 120


>tr|B4FBC9|B4FBC9_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 620

Score = 38.5 bits (88), Expect = 0.25
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = -1

Query: 474 FVEESYYVKDLKESEKRALQDLKSKIADAIKNNSFLAPPPKA 349
F EES V +L + E+ AL LK +A A+ N F PPP A
Sbjct: 87 FKEESNLVSELPDPERTALAQLKELVATALANGEFNLPPPPA 128


>tr|B6TVE3|B6TVE3_MAIZE Patellin-1 OS=Zea mays PE=2 SV=1
Length = 567

Score = 38.1 bits (87), Expect = 0.33
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1

Query: 474 FVEESYYVKDLKESEKRALQDLKSKIADAIKNNSFLAPPP 355
F EES V+DL + EK+AL + K IA A+ F PPP
Sbjct: 65 FKEESNLVEDLPDPEKKALDEFKQLIAAALAAGEFNLPPP 104


>tr|B5JAD9|B5JAD9_9RHOB Poly(R)-hydroxyalkanoic acid synthase, class
I subfamily OS=Octadecabacter antarcticus 307
GN=OA307_445 PE=4 SV=1
Length = 607

Score = 36.6 bits (83), Expect = 0.95
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -1

Query: 453 VKDLKESEKRALQDLKSKIADAIKNNSFLAPPPKAATTVASTEGD 319
++ L +SEKR L+ +I D + +FLA P A T TEGD
Sbjct: 151 MEGLDDSEKRRLEFFSHQIVDMLSPTNFLATNPDALTKAVETEGD 195