BP921714
Clone id YMU001_000153_C07
Library
Length 523
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000153_C07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CACAAACAAACATCAACAGCGGAAAAAGCCCTCACATACAACACAAAGGACAAGTGCAAA
AAGAATTTTGATAAGATGAGAGTTATGAGTGCAAAGCTTGCAGCAAGGCACTACATACAA
CATTTCAACTACATGCACCCGAGAGAGATACACCAATGTCAGCAAGCTACTTGGAGTAAT
CTTCACATGGAAGATGAGGCAAAAATTCTTGGAACTACATCCATAAATAGCTTATCAAGG
AAGCCAAATGTGCCCAAGATAAGAAGCCATCTTTATACGGCGGGGAGGTCCTCACCAAGA
TTGCCTATGCCGCATTAGGCATCGAACACCTGCCGCCACCACATCCAATGGAATGGTTGA
AGACAATAGACAAGACAATACTTCCAAAAGAGATACAAACAAGAGAGCAAGGAAGGGCAC
CATCCTCTGCTGCTTCACATGCCACATCCCAAGCAGCAGCAACGTCAAAGACTTTAAGAG
GACCACAAGGAAGAAGAAGTCCTCCTACATGCCAACCCTCACA
■■Homology search results ■■ -
sp_hit_id Q571B6
Definition sp|Q571B6|WHDC1_MOUSE WASP homolog associated-protein with actin, membranes and microtubules OS=Mus musculus
Align length 43
Score (bit) 31.2
E-value 3.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921714|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_C07.
(523 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q571B6|WHDC1_MOUSE WASP homolog associated-protein with actin... 31 3.1
sp|B1APH4|ZN487_HUMAN Zinc finger protein 487 OS=Homo sapiens GN... 31 4.0
sp|Q12050|ELG1_YEAST Telomere length regulation protein ELG1 OS=... 31 4.1
sp|Q9H8Q0|CXY02_HUMAN Uncharacterized protein CXYorf2 OS=Homo sa... 30 5.3
sp|Q8N8L2|ZN491_HUMAN Zinc finger protein 491 OS=Homo sapiens GN... 30 9.0
sp|O18086|NH218_CAEEL Nuclear hormone receptor family member nhr... 30 9.1

>sp|Q571B6|WHDC1_MOUSE WASP homolog associated-protein with actin,
membranes and microtubules OS=Mus musculus GN=Whdc1 PE=2
SV=2
Length = 793

Score = 31.2 bits (69), Expect = 3.1
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1

Query: 19 AEKALTYNTKDKCKKNFDKMRVMSAKLAARHYIQHFNYMHPRE 147
+ +AL N KD C++N ++R+ AK + RH QH + R+
Sbjct: 470 SRRALLRNRKDHCRENH-QLRLQQAKQSLRHLHQHHSIQMKRD 511


>sp|B1APH4|ZN487_HUMAN Zinc finger protein 487 OS=Homo sapiens
GN=ZNF487 PE=2 SV=3
Length = 448

Score = 30.8 bits (68), Expect = 4.0
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3

Query: 12 INSGKSPHIQHKGQVQKEF**DESYECKACSKALHTTFQLHAPER 146
+N GK I H Q KE D++YEC C K LH +R
Sbjct: 262 LNVGKLLDIGHALQYIKEHTRDKTYECNECGKNFCEKSNLHVHQR 306


>sp|Q12050|ELG1_YEAST Telomere length regulation protein ELG1
OS=Saccharomyces cerevisiae GN=ELG1 PE=1 SV=1
Length = 791

Score = 30.8 bits (68), Expect = 4.1
Identities = 24/87 (27%), Positives = 36/87 (41%)
Frame = +1

Query: 13 STAEKALTYNTKDKCKKNFDKMRVMSAKLAARHYIQHFNYMHPREIHQCQQATWSNLHME 192
S E +T TK+KC + D + V+S K P+ C + S H E
Sbjct: 71 SAKEFLMTKRTKEKCDDDDDDLIVISDK-------------SPKSETNCSKIALSQEH-E 116

Query: 193 DEAKILGTTSINSLSRKPNVPKIRSHL 273
D+ I+ T+ I S KI++ L
Sbjct: 117 DDISIISTSRIKSSLLNERASKIKNFL 143


>sp|Q9H8Q0|CXY02_HUMAN Uncharacterized protein CXYorf2 OS=Homo
sapiens GN=CXYorf2 PE=2 SV=1
Length = 193

Score = 30.4 bits (67), Expect = 5.3
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2

Query: 308 CRIRHRTPAATTSNGMVEDNRQDNTSKRDTNKRARKG 418
CRIRHRT ++ G ++ + T KRDT+ R R+G
Sbjct: 103 CRIRHRTYSSALGRGSLKKSPGLKT-KRDTSVRDRRG 138


>sp|Q8N8L2|ZN491_HUMAN Zinc finger protein 491 OS=Homo sapiens
GN=ZNF491 PE=2 SV=1
Length = 437

Score = 29.6 bits (65), Expect = 9.0
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3

Query: 75 DESYECKACSKALHTTFQLHAPER 146
++ YECK C KA H H ER
Sbjct: 352 EKPYECKQCGKAFHCVSSFHRHER 375


>sp|O18086|NH218_CAEEL Nuclear hormone receptor family member
nhr-218 OS=Caenorhabditis elegans GN=nhr-218 PE=2 SV=2
Length = 391

Score = 29.6 bits (65), Expect = 9.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2

Query: 135 HVVEMLYVVPCCKLCTHNSHLIKILFALVLCVVCEGFFR 19
H+ ML C++CT+ SH + F ++ C C FFR
Sbjct: 9 HLEPMLTQPIPCQICTYQSHGVN--FNVMTCRACAAFFR 45


tr_hit_id A6RCR6
Definition tr|A6RCR6|A6RCR6_AJECN Predicted protein OS=Ajellomyces capsulata (strain NAm1 / WU24)
Align length 38
Score (bit) 34.3
E-value 3.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921714|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_C07.
(523 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6RCR6|A6RCR6_AJECN Predicted protein OS=Ajellomyces capsulat... 34 3.9

>tr|A6RCR6|A6RCR6_AJECN Predicted protein OS=Ajellomyces capsulata
(strain NAm1 / WU24) GN=HCAG_07424 PE=4 SV=1
Length = 750

Score = 34.3 bits (77), Expect = 3.9
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1

Query: 193 DEAKILGTTSINSLSRKPNVPKIRSHLYTAGRSSPRLP 306
DEA GT +IN ++ PNVP+ SH ++PR+P
Sbjct: 577 DEAN--GTEAINDIADPPNVPRFSSHSRKRSNTAPRIP 612