BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921730|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_E02.
         (513 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q19127|NPC1_CAEEL Niemann-Pick C1 protein homolog 1 OS=Caenor...    34   0.46 
sp|P52496|DNLI4_CANAL DNA ligase 4 OS=Candida albicans GN=LIG4 P...    30   8.5  
sp|Q4I8P5|COX16_GIBZE Cytochrome c oxidase-assembly factor COX16...    30   8.7  

>sp|Q19127|NPC1_CAEEL Niemann-Pick C1 protein homolog 1
           OS=Caenorhabditis elegans GN=ncr-1 PE=1 SV=2
          Length = 1383

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = -1

Query: 339 NVRSLVCFFIFCVIAIVGSLLCIVVV*SMITQDGDSKHSIRQLKVGKR*PKMGNL 175
           NV  + C  IF ++A +GSL  ++ V  + T   +   ++RQ + G+  PK   +
Sbjct: 273 NVHGIACLNIFVMLAFIGSLAVLLCVGFVFTSYDEDYTNLRQTQSGEESPKRNRI 327


>sp|P52496|DNLI4_CANAL DNA ligase 4 OS=Candida albicans GN=LIG4 PE=2
           SV=3
          Length = 928

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 13/51 (25%), Positives = 28/51 (54%)
 Frame = -2

Query: 155 TLSLSNGFPMKMLNAFPSCQPAFSSRPQLPKPLNSQGRTIVDTIEKLHQLD 3
           TL  S    +++  +  +  P F  +PQL + L +  +T+V  +++ H++D
Sbjct: 233 TLQFSTNPDLRLDPSQLAIHPCFKFKPQLSERLTTSYKTLVKKLQRKHEMD 283


>sp|Q4I8P5|COX16_GIBZE Cytochrome c oxidase-assembly factor COX16,
           mitochondrial OS=Gibberella zeae GN=COX16 PE=3 SV=1
          Length = 115

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 385 LHWKESTN*HKFLMFGLPFKTILHA 459
           + ++   N H FLMFGLPF T++ A
Sbjct: 20  MRYRNLMNKHPFLMFGLPFLTVIVA 44

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921730|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_E02.
         (513 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q3SDA5|Q3SDA5_PARTE Mini antigen (Chromosome undetermined sca...    34   3.7  
tr|Q22C06|Q22C06_TETTH Hypothetical repeat containing protein OS...    34   4.8  
tr|A8XK09|A8XK09_CAEBR CBR-NCR-1 protein OS=Caenorhabditis brigg...    34   4.9  

>tr|Q3SDA5|Q3SDA5_PARTE Mini antigen (Chromosome undetermined
            scaffold_141, whole genome shotgun sequence)
            OS=Paramecium tetraurelia GN=mag7 PE=4 SV=1
          Length = 1773

 Score = 34.3 bits (77), Expect = 3.7
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
 Frame = -3

Query: 433  AQTSETCVSWCFLSSAERDQNWEVWAAQ----ICAKCTQFSLFFYILRDCNCRQLALYCC 266
            A TS+TC S  F+ S      W    A+     CA C+Q+SL       C+C +L+ Y C
Sbjct: 1470 AATSKTCYSNSFMMS-----RWTSTQAESPNGFCASCSQYSLTQTYKSVCSCSELSQYEC 1524

Query: 265  SM 260
             +
Sbjct: 1525 QV 1526


>tr|Q22C06|Q22C06_TETTH Hypothetical repeat containing protein
            OS=Tetrahymena thermophila SB210 GN=TTHERM_01081630 PE=4
            SV=1
          Length = 3148

 Score = 33.9 bits (76), Expect = 4.8
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -3

Query: 394  SSAERDQNWEVWAAQICAKCTQFSLFFYILRDC-NCRQLALYC 269
            S  E++Q    +   IC KC+Q+ L  Y L+ C NC    LYC
Sbjct: 1600 SQIEKNQQKYYYFVTICLKCSQYYLVSYNLQSCDNCGINCLYC 1642


>tr|A8XK09|A8XK09_CAEBR CBR-NCR-1 protein OS=Caenorhabditis briggsae
           GN=Cbr-ncr-1 PE=4 SV=2
          Length = 1431

 Score = 33.9 bits (76), Expect = 4.9
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = -1

Query: 339 NVRSLVCFFIFCVIAIVGSLLCIVVV*SMITQDGDSKHSIRQLKVGKR*PKMGNL 175
           NV  + C  IF ++A +GSL  ++ V  + T   +   ++RQ + G+  PK   +
Sbjct: 282 NVHGIACLNIFVMLAFIGSLAVLLCVGFVFTSYDEEYTNLRQNQAGQESPKRNRI 336