BP921735 |
Clone id |
YMU001_000153_E07 |
Library |
YMU01 |
Length |
532 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000153_E07. |
Accession |
BP921735 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CACAAGTGTCGCAATTCAGTACAGGAGCACAAAAAGCTTGCTATGGTGTGACCTTTGCTG AGTACTGTGGCAGGTAAGCAAGCTGGAAGTCTTGATTTTAGAAATAGCCGGTTAATGGAG TTTTAGGTTAGTAAAACAACGCGAATTGGTAATATTCTTTTGGAGGATTCACTTTTGTCT ATTAGAAGCTCTTCTATAAACAAGGGTTTCTGCCCGTGCATGTCAGCAATGTGTTAGCTG ACTCGTGCTCTCTTTGCCAAACTTATTGTTGTCTTTGATGACTTATCAGCTCTCTTTTCT CTCTTTCGTGTTCTTGTGCTTGCTCCTGAGGAAGAGAGGGGGAGAGTGATTCAGCCTGAG CCTGACCATGATGCAGTTTGTTAAATGCGGAATCCGGGGGATAGGTGTTGTTATGCAGGT CATAATACAGTTTCTTCTCTCTTAATGATTCCGTTAGATAGCTGGAGATAGGCTCATTAG GCATGTTTTATAGGTCATTTGACTTGTAACGTAGGTCAGTATAAAATTTCGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9JI35 |
Definition |
sp|Q9JI35|HRH3_CAVPO Histamine H3 receptor OS=Cavia porcellus |
Align length |
56 |
Score (bit) |
34.3 |
E-value |
0.38 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B3NSK7 |
Definition |
tr|B3NSK7|B3NSK7_DROER GG20184 OS=Drosophila erecta |
Align length |
81 |
Score (bit) |
37.7 |
E-value |
0.37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921735|Adiantum capillus-veneris mRNA, clone: YMU001_000153_E07. (532 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B3NSK7|B3NSK7_DROER GG20184 OS=Drosophila erecta GN=GG20184 P... 38 0.37 tr|B4LW35|B4LW35_DROVI GJ23649 OS=Drosophila virilis GN=GJ23649 ... 37 0.83 tr|B4LG48|B4LG48_DROVI GJ12163 OS=Drosophila virilis GN=GJ12163 ... 36 1.1 tr|Q94485|Q94485_DICDI ORF DG1016 (Fragment) OS=Dictyostelium di... 36 1.4 tr|Q86M87|Q86M87_DICDI ComB OS=Dictyostelium discoideum GN=comB ... 36 1.4 tr|Q54T92|Q54T92_DICDI Rab GTPase domain-containing protein OS=D... 36 1.4 tr|A0NCL4|A0NCL4_ANOGA AGAP000080-PD (Fragment) OS=Anopheles gam... 36 1.4 tr|Q86H70|Q86H70_DICDI Putative uncharacterized protein OS=Dicty... 35 3.2 tr|Q7QEP1|Q7QEP1_ANOGA AGAP000080-PB (Fragment) OS=Anopheles gam... 35 3.2 tr|Q5TUU8|Q5TUU8_ANOGA AGAP000080-PC OS=Anopheles gambiae GN=AGA... 35 3.2 tr|B4QB56|B4QB56_DROSI GD10784 OS=Drosophila simulans GN=GD10784... 35 3.2 tr|B4PRG4|B4PRG4_DROYA GE25779 OS=Drosophila yakuba GN=GE25779 P... 35 3.2 tr|B3NYQ0|B3NYQ0_DROER GG25051 OS=Drosophila erecta GN=GG25051 P... 35 3.2 tr|A0NCL3|A0NCL3_ANOGA AGAP000080-PA (Fragment) OS=Anopheles gam... 35 3.2 tr|B2AYZ7|B2AYZ7_PODAN Predicted CDS Pa_1_12770 OS=Podospora ans... 35 3.2 tr|Q4DU48|Q4DU48_TRYCR Mucin-associated surface protein (MASP), ... 34 4.1 tr|B4LFX3|B4LFX3_DROVI GJ13741 OS=Drosophila virilis GN=GJ13741 ... 34 4.1 tr|Q8IE39|Q8IE39_PLAF7 Putative uncharacterized protein PF13_015... 34 5.4 tr|Q5CW78|Q5CW78_CRYPV Putative uncharacterized protein OS=Crypt... 34 5.4 tr|Q4E1Y4|Q4E1Y4_TRYCR Mucin-associated surface protein (MASP), ... 34 5.4 tr|Q22D80|Q22D80_TETTH Putative uncharacterized protein OS=Tetra... 34 5.4 tr|B4LZK6|B4LZK6_DROVI GJ23999 OS=Drosophila virilis GN=GJ23999 ... 34 5.4 tr|A8QA25|A8QA25_MALGO Putative uncharacterized protein OS=Malas... 34 5.4 tr|A5E7Z1|A5E7Z1_LODEL Putative uncharacterized protein OS=Lodde... 34 5.4 tr|Q5NXE6|Q5NXE6_AZOSE Putative uncharacterized protein OS=Azoar... 33 7.0 tr|A0DQ14|A0DQ14_PARTE Chromosome undetermined scaffold_6, whole... 33 7.0 tr|Q9VA34|Q9VA34_DROME CG15544 OS=Drosophila melanogaster GN=CG1... 33 9.2 tr|Q29DT1|Q29DT1_DROPS GA17729 OS=Drosophila pseudoobscura pseud... 33 9.2 tr|B4R763|B4R763_DROSI GD16963 OS=Drosophila simulans GN=GD16963... 33 9.2 tr|B4R3Z0|B4R3Z0_DROSI GD15921 OS=Drosophila simulans GN=GD15921... 33 9.2
>tr|B3NSK7|B3NSK7_DROER GG20184 OS=Drosophila erecta GN=GG20184 PE=4 SV=1 Length = 367
Score = 37.7 bits (86), Expect = 0.37 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 8/81 (9%) Frame = -1
Query: 451 ESLREKKLYYDLHNNTYPPDSAFNKLHH--------GQAQAESLSPSLPQEQAQEHEREK 296 + L++++ + ++ Y PD FN+LH GQ +S +L +QAQ+ + Sbjct: 249 QQLQQQRGFQQSNSGQYQPDQPFNQLHSGNLPGQYAGQFGQQSFGSNLTAQQAQQQQNLN 308
Query: 295 RELISHQRQQ*VWQREHESAN 233 ++ Q+QQ Q++ E N Sbjct: 309 QQQQQQQQQQQQQQQQKEQQN 329
>tr|B4LW35|B4LW35_DROVI GJ23649 OS=Drosophila virilis GN=GJ23649 PE=4 SV=1 Length = 693
Score = 36.6 bits (83), Expect = 0.83 Identities = 20/78 (25%), Positives = 41/78 (52%) Frame = -1
Query: 475 EPISSYLTESLREKKLYYDLHNNTYPPDSAFNKLHHGQAQAESLSPSLPQEQAQEHEREK 296 E +++ ++++ +L Y + F +L QAQA+ L Q+Q Q H+ ++ Sbjct: 519 EELNAQAHAQFQQQQYQQELQQQQYQQELQFEELK-AQAQAQHLQHQQHQQQLQLHQLQQ 577
Query: 295 RELISHQRQQ*VWQREHE 242 ++L HQ+QQ Q++ + Sbjct: 578 QQLQQHQQQQQQQQQQQQ 595
>tr|B4LG48|B4LG48_DROVI GJ12163 OS=Drosophila virilis GN=GJ12163 PE=4 SV=1 Length = 707
Score = 36.2 bits (82), Expect = 1.1 Identities = 18/64 (28%), Positives = 33/64 (51%) Frame = -1
Query: 418 LHNNTYPPDSAFNKLHHGQAQAESLSPSLPQEQAQEHEREKRELISHQRQQ*VWQREHES 239 LHN+ +P +A ++ H Q A +L Q+Q Q+H +++ Q Q Q++H Sbjct: 340 LHNSHHPSGNAADQFDHSQNSATALHQQQLQQQLQQHHSQQQLQQQQQASQHQLQQQHSH 399
Query: 238 ANTL 227 ++ L Sbjct: 400 SSLL 403
>tr|Q94485|Q94485_DICDI ORF DG1016 (Fragment) OS=Dictyostelium discoideum PE=4 SV=1 Length = 660
Score = 35.8 bits (81), Expect = 1.4 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 4/76 (5%) Frame = -1
Query: 481 PNEPISSYLTES----LREKKLYYDLHNNTYPPDSAFNKLHHGQAQAESLSPSLPQEQAQ 314 P P SS L+ + L +LHN +A N L QAQA+ L+ L Q QAQ Sbjct: 198 PQTPTSSSLSVNQPFNLNSSTNINNLHNYV----NALN-LQQQQAQAQQLAQQLAQAQAQ 252
Query: 313 EHEREKRELISHQRQQ 266 +H+ + ++ + Q+QQ Sbjct: 253 QHQYDLQQQLQQQQQQ 268
>tr|Q86M87|Q86M87_DICDI ComB OS=Dictyostelium discoideum GN=comB PE=3 SV=1 Length = 2107
Score = 35.8 bits (81), Expect = 1.4 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 4/76 (5%) Frame = -1
Query: 481 PNEPISSYLTES----LREKKLYYDLHNNTYPPDSAFNKLHHGQAQAESLSPSLPQEQAQ 314 P P SS L+ + L +LHN +A N L QAQA+ L+ L Q QAQ Sbjct: 789 PQTPTSSSLSVNQPFNLNSSTNINNLHNYV----NALN-LQQQQAQAQQLAQQLAQAQAQ 843
Query: 313 EHEREKRELISHQRQQ 266 +H+ + ++ + Q+QQ Sbjct: 844 QHQYDLQQQLQQQQQQ 859
>tr|Q54T92|Q54T92_DICDI Rab GTPase domain-containing protein OS=Dictyostelium discoideum GN=comB PE=3 SV=1 Length = 2107
Score = 35.8 bits (81), Expect = 1.4 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 4/76 (5%) Frame = -1
Query: 481 PNEPISSYLTES----LREKKLYYDLHNNTYPPDSAFNKLHHGQAQAESLSPSLPQEQAQ 314 P P SS L+ + L +LHN +A N L QAQA+ L+ L Q QAQ Sbjct: 789 PQTPTSSSLSVNQPFNLNSSTNINNLHNYV----NALN-LQQQQAQAQQLAQQLAQAQAQ 843
Query: 313 EHEREKRELISHQRQQ 266 +H+ + ++ + Q+QQ Sbjct: 844 QHQYDLQQQLQQQQQQ 859
>tr|A0NCL4|A0NCL4_ANOGA AGAP000080-PD (Fragment) OS=Anopheles gambiae GN=AGAP000080 PE=4 SV=1 Length = 400
Score = 35.8 bits (81), Expect = 1.4 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%) Frame = -1
Query: 415 HNNTYPPDSAFNKLHHGQAQAESLS-----PSLPQEQAQEHEREKRELISHQRQQ*VWQR 251 +NNT ++ N LHHG + + L+ L Q+Q Q H ++++ SHQ+Q + Sbjct: 173 NNNTISSNNNNNSLHHGPLRDKELTEHEQLERLQQQQQQTHHQQQQHPSSHQQQ----SQ 228
Query: 250 EHESA 236 +H SA Sbjct: 229 QHPSA 233
>tr|Q86H70|Q86H70_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum GN=DDB_0167340 PE=4 SV=1 Length = 726
Score = 34.7 bits (78), Expect = 3.2 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Frame = -1
Query: 460 YLTESLREKKLYYDLHNNTYPPDSAFNKLH-----HGQAQAESLSPSLPQEQAQEHEREK 296 YL + + YY + NN Y + H H Q Q + L Q+Q Q+ ++++ Sbjct: 611 YLYSQQNQNQPYYQIQNNQYNQNIQHQHQHQQSQQHQQHQQQHLQQQQQQQQQQQQQQQQ 670
Query: 295 RELISHQRQQ*VWQREHE 242 ++ Q+QQ Q++ + Sbjct: 671 QQQQQQQQQQQQQQQQQQ 688
>tr|Q7QEP1|Q7QEP1_ANOGA AGAP000080-PB (Fragment) OS=Anopheles gambiae GN=AGAP000080 PE=4 SV=3 Length = 718
Score = 34.7 bits (78), Expect = 3.2 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = -1
Query: 415 HNNTYPPDSAFNKLHHGQAQAESLS-----PSLPQEQAQEHEREKRELISHQRQ 269 +NNT ++ N LHHG + + L+ L Q+Q Q H ++++ SHQ+Q Sbjct: 173 NNNTISSNNNNNSLHHGPLRDKELTEHEQLERLQQQQQQTHHQQQQHPSSHQQQ 226
>tr|Q5TUU8|Q5TUU8_ANOGA AGAP000080-PC OS=Anopheles gambiae GN=AGAP000080 PE=4 SV=2 Length = 592
Score = 34.7 bits (78), Expect = 3.2 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = -1
Query: 415 HNNTYPPDSAFNKLHHGQAQAESLS-----PSLPQEQAQEHEREKRELISHQRQ 269 +NNT ++ N LHHG + + L+ L Q+Q Q H ++++ SHQ+Q Sbjct: 165 NNNTISSNNNNNSLHHGPLRDKELTEHEQLERLQQQQQQTHHQQQQHPSSHQQQ 218
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