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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921743
Clone id YMU001_000153_F05
Library
Length 538
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000153_F05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCTGCGTTTAGACTGCGCAGGTAGTGCATTCAAACGTAGAAGGTACTCCCATCCTCTCCC
ATTCACACAGTGCTGGATAGTCTGGACTTGCAAGAAATCTTCGGCTCCATCCTCGCCTTC
CTCAAGTGTGTCAGCGATCCAAGGGCAGCCTGCCTGCATTTTGTGCTGGAACATAGGCGG
GGACACAATGCCTCTGAGGGGAGATGCCACCCAAGCCCATTCTTCTGGTGAGTCTGGATA
TGCACACCTTTGCTTTTCACCGGTCTCTGCTTGCCAAGGGGGATGAACGCCCCTACCGCT
GTTTCACTTTGGGGCAGTCTGAATCTCATTAAGTAGAATTATGCTGTAAGTCAGTGTAGG
CCAAAACATTCTCCACAAGCCTTTTGGAATGCTAAAAGAAACTCCTACTGTAATATAAGC
TAGAATTTGATTGATGTGAGGAACAATCTCTCACACGCAGAAGAGGAGGGGGTTAATACT
AACTATACCTCTTTGAGGTGAAGTTATTTGAGGGAGAAGGGGGTAACCCAAAATGGTT
■■Homology search results ■■ -
sp_hit_id Q8IN94
Definition sp|Q8IN94|OSA_DROME Trithorax group protein osa OS=Drosophila melanogaster
Align length 57
Score (bit) 33.9
E-value 0.52
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921743|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_F05.
         (538 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8IN94|OSA_DROME Trithorax group protein osa OS=Drosophila me...    34   0.52 
sp|Q7TSN5|GP151_RAT Probable G-protein coupled receptor 151 OS=R...    30   5.7  
sp|P0C1T0|MMEL1_RAT Membrane metallo-endopeptidase-like 1 OS=Rat...    30   9.7  

>sp|Q8IN94|OSA_DROME Trithorax group protein osa OS=Drosophila
            melanogaster GN=osa PE=1 SV=1
          Length = 2716

 Score = 33.9 bits (76), Expect = 0.52
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 333  LNEIQTAPK*NSGRGVHPPWQAETGEKQRCAYPDSPEEWAWVASPLRGIVSPPMFQH 163
            + + Q  P  N+   ++  WQ+ T ++ R  YP SP    W  +P RG   PP   H
Sbjct: 1488 IKDSQPYPGYNARPQIYGAWQSGT-QQYRPQYPSSPAPQNWGGAPPRGAAPPPGAPH 1543


>sp|Q7TSN5|GP151_RAT Probable G-protein coupled receptor 151
           OS=Rattus norvegicus GN=Gpr151 PE=2 SV=1
          Length = 421

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
 Frame = -2

Query: 498 PQRGIVSINP-LLFCV*EIVPHINQILAYITVGVSFSIP-KGLWRMFWPTLTYSIILLNE 325
           P +G ++++  L+F +  + P     L ++ +   F    KG+W+     +T   ++ +E
Sbjct: 286 PPQGFIALSQVLMFSISTVNP-----LIFLMMSEEFKAGLKGIWKWM---ITRKPVVTSE 337

Query: 324 IQTAPK*N----SGRGVHPPWQAETGEKQRCAYPDSPEE 220
           +Q  P  N     G+   P  Q    +  RC  PDS +E
Sbjct: 338 VQEVPAGNIETLPGKAPSPETQTCIPDTDRCGSPDSSKE 376


>sp|P0C1T0|MMEL1_RAT Membrane metallo-endopeptidase-like 1 OS=Rattus
           norvegicus GN=Mmel1 PE=1 SV=1
          Length = 774

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 16/74 (21%), Positives = 36/74 (48%)
 Frame = -3

Query: 332 LMRFRLPQSETAVGAFIPLGKQRPVKSKGVHIQTHQKNGLGWHLPSEALCPRLCSSTKCR 153
           L+   L  +   +G F  +GKQ P+ +  +H+  H++  +   L   +    +C++  C 
Sbjct: 32  LLTLLLMGAIVTLGVFYSIGKQLPLLNSLLHVSRHERTVVKRVLRDSSQKSDICTTPSCV 91

Query: 152 QAALGSLTHLRKAR 111
            AA   L ++ +++
Sbjct: 92  IAAARILQNMDQSK 105
tr_hit_id A6GEC9
Definition tr|A6GEC9|A6GEC9_9DELT Glycerophosphoryl diester phosphodiesterase OS=Plesiocystis pacifica SIR-1
Align length 47
Score (bit) 35.4
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921743|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_F05.
         (538 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6GEC9|A6GEC9_9DELT Glycerophosphoryl diester phosphodiestera...    35   1.9  
tr|B3P0H1|B3P0H1_DROER GG16758 OS=Drosophila erecta GN=GG16758 P...    35   2.5  
tr|A0KFN7|A0KFN7_AERHH Hydrolase, alpha/beta fold family OS=Aero...    34   5.6  
tr|Q7KSE8|Q7KSE8_DROME Osa, isoform C OS=Drosophila melanogaster...    34   5.6  
tr|B6IDZ6|B6IDZ6_DROME LD42748p (Fragment) OS=Drosophila melanog...    34   5.6  
tr|B4IBE1|B4IBE1_DROSE GM15347 OS=Drosophila sechellia GN=GM1534...    34   5.6  
tr|B2V8R3|B2V8R3_SULSY NADH dehydrogenase (Quinone) OS=Sulfurihy...    33   7.3  
tr|B4MZ25|B4MZ25_DROWI GK18096 OS=Drosophila willistoni GN=GK180...    33   7.3  
tr|A2QLS6|A2QLS6_ASPNC Similarity to arabinose transport protein...    33   7.3  
tr|A6X6A3|A6X6A3_OCHA4 Transporter, hydrophobe/amphiphile efflux...    33   9.5  

>tr|A6GEC9|A6GEC9_9DELT Glycerophosphoryl diester phosphodiesterase
           OS=Plesiocystis pacifica SIR-1 GN=PPSIR1_17725 PE=4 SV=1
          Length = 272

 Score = 35.4 bits (80), Expect = 1.9
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -2

Query: 171 FQHKMQAGCPWIADTLEEGEDGAEDFLQVQTIQHCVNGRG--WEYLL 37
           F+H ++AGC WI   +    DG         ++   NGRG  WEY L
Sbjct: 31  FRHGLEAGCRWIETDVHLTRDGHVVCFHDNDLERTTNGRGKVWEYTL 77


>tr|B3P0H1|B3P0H1_DROER GG16758 OS=Drosophila erecta GN=GG16758 PE=4
            SV=1
          Length = 2704

 Score = 35.0 bits (79), Expect = 2.5
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 333  LNEIQTAPK*NSGRGVHPPWQAETGEKQRCAYPDSPEEWAWVASPLRGIVSPPMFQH 163
            + + Q  P  N+   ++  WQ  T ++ R  YP SP   +W  +P RG   PP   H
Sbjct: 1476 IKDSQPYPGYNARPQIYGAWQGGT-QQYRPQYPSSPSPQSWGGAPPRGAAPPPGAPH 1531


>tr|A0KFN7|A0KFN7_AERHH Hydrolase, alpha/beta fold family
           OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC
           7966 / NCIB 9240) GN=AHA_0530 PE=4 SV=1
          Length = 256

 Score = 33.9 bits (76), Expect = 5.6
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = -1

Query: 190 HCVPAYVPAQNAGRLPLDR*HT*GRRGWSRRFLASPDYPALCEWERMGV 44
           +C P   PA+   RL  D        GW+RRF   P    L +W R GV
Sbjct: 103 NCHPGLPPAERPARLAHDE-------GWARRFEQEPLAAVLADWYRQGV 144


>tr|Q7KSE8|Q7KSE8_DROME Osa, isoform C OS=Drosophila melanogaster
            GN=osa PE=2 SV=1
          Length = 2556

 Score = 33.9 bits (76), Expect = 5.6
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 333  LNEIQTAPK*NSGRGVHPPWQAETGEKQRCAYPDSPEEWAWVASPLRGIVSPPMFQH 163
            + + Q  P  N+   ++  WQ+ T ++ R  YP SP    W  +P RG   PP   H
Sbjct: 1328 IKDSQPYPGYNARPQIYGAWQSGT-QQYRPQYPSSPAPQNWGGAPPRGAAPPPGAPH 1383


>tr|B6IDZ6|B6IDZ6_DROME LD42748p (Fragment) OS=Drosophila melanogaster
            GN=osa-RC PE=2 SV=1
          Length = 2177

 Score = 33.9 bits (76), Expect = 5.6
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 333  LNEIQTAPK*NSGRGVHPPWQAETGEKQRCAYPDSPEEWAWVASPLRGIVSPPMFQH 163
            + + Q  P  N+   ++  WQ+ T ++ R  YP SP    W  +P RG   PP   H
Sbjct: 1328 IKDSQPYPGYNARPQIYGAWQSGT-QQYRPQYPSSPAPQNWGGAPPRGAAPPPGAPH 1383


>tr|B4IBE1|B4IBE1_DROSE GM15347 OS=Drosophila sechellia GN=GM15347
            PE=4 SV=1
          Length = 2705

 Score = 33.9 bits (76), Expect = 5.6
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -2

Query: 333  LNEIQTAPK*NSGRGVHPPWQAETGEKQRCAYPDSPEEWAWVASPLRGIVSPPMFQH 163
            + + Q  P  N+   ++  WQ+ T ++ R  YP SP    W  +P RG   PP   H
Sbjct: 1477 IKDSQPYPGYNARPQIYGAWQSGT-QQYRPQYPSSPAPQNWGGAPPRGAAPPPGAPH 1532


>tr|B2V8R3|B2V8R3_SULSY NADH dehydrogenase (Quinone)
           OS=Sulfurihydrogenibium sp. (strain YO3AOP1)
           GN=SYO3AOP1_0700 PE=4 SV=1
          Length = 484

 Score = 33.5 bits (75), Expect = 7.3
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = -2

Query: 534 ILGYPLLPQITSPQRGIVSINPLLFCV*EIVPHINQILAYITVGVSFSI 388
           ILGY L+ +I +PQ  I  +N LLF     +  +N IL  + + +SF +
Sbjct: 36  ILGYSLISKINNPQDRIYELNSLLF-----LDSLNSILLLVILTISFFV 79


>tr|B4MZ25|B4MZ25_DROWI GK18096 OS=Drosophila willistoni GN=GK18096
           PE=4 SV=1
          Length = 480

 Score = 33.5 bits (75), Expect = 7.3
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +1

Query: 304 SLWGSLNLIK*NYAVSQCRPKHSPQAFWNAKR---NSYCNIS*NLID 435
           S W  L+L   NY    CRP+  PQA+ NA       Y N   NL+D
Sbjct: 114 SPWSELDLRSRNYEDWPCRPRARPQAYANATHELPELYSNFDNNLVD 160


>tr|A2QLS6|A2QLS6_ASPNC Similarity to arabinose transport protein
           araE - Escherichia coli OS=Aspergillus niger (strain CBS
           513.88 / FGSC A1513) GN=An06g02270 PE=3 SV=1
          Length = 563

 Score = 33.5 bits (75), Expect = 7.3
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = -2

Query: 465 LFCV*EIVPHINQILAYITVGVSFSIPKGLWR-MFWPTLTYSIILLNEIQTAPK*NSGRG 289
           L  V +++    +I+ Y   GV F +P G WR M   +L +S ILL  +   P+      
Sbjct: 203 LVSVYQLMIAFGEIIGYAAGGVFFDVPSGSWRWMLGSSLLFSTILLVGMAFLPE------ 256

Query: 288 VHPPWQAETGEKQR 247
             P W A  G+  R
Sbjct: 257 -SPRWLASKGKYGR 269


>tr|A6X6A3|A6X6A3_OCHA4 Transporter, hydrophobe/amphiphile efflux-1
           (HAE1) family OS=Ochrobactrum anthropi (strain ATCC
           49188 / DSM 6882 / NCTC 12168) GN=Oant_4054 PE=4 SV=1
          Length = 1057

 Score = 33.1 bits (74), Expect = 9.5
 Identities = 20/58 (34%), Positives = 27/58 (46%)
 Frame = +2

Query: 170 NIGGDTMPLRGDATQAHSSGESGYAHLCFSPVSACQGG*TPLPLFHFGAV*ISLSRIM 343
           N+ G+ +PL    T  HSSG     H    P +   GG  P P + FG    ++ RIM
Sbjct: 801 NMAGEMIPLSALLTIQHSSGPDRVMHYNSFPSADISGG--PAPGYSFGQATAAIERIM 856