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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921750
Clone id YMU001_000153_G03
Library
Length 478
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000153_G03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ATAAAACGCCGCAGACACATCCTTCCAAGCTCTTGTCCTCCAAGCTTGCAGGTTTCTTTC
TTATTCTTCTCATTCTCCAATTTGTCTCCCAGCTTACAGGTTTCTTTCTTATTCTTCTCA
TTCTCTGATTTGTCTCCCAGCTTACAGGTTTCTTTCTTATTCTTTATTCTCCTCTTTCGT
ACGTAGCTCAGTTGACGAATGATGAGAAGAGGCTATTGCATAGGGCTCCAAGAAAATAGC
ATTTCCGGAGAAGTCCAGCCCGATAATGCCCTTCCTTAATAGAAGTTCCTTGACAAAAAC
AATTGGATCTCCAAGATCATAACTATTGATAAACTCTTCAAAGTGAGATACCTTTGAATT
TGTGATTGCCTTCCTAGCAACCACCAATTGCACATCAAAATCTGACACTAAATTCGTCAT
CTCTTTCAAACGTTGGAGAAGCTTCTTTGTCGATCCATCTTCTCTATAGTTGTGAGCA
■■Homology search results ■■ -
sp_hit_id B1VKH5
Definition sp|B1VKH5|RPOC2_CRYJA DNA-directed RNA polymerase subunit beta'' OS=Cryptomeria japonica
Align length 49
Score (bit) 45.8
E-value 0.0001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921750|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_G03.
         (478 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|B1VKH5|RPOC2_CRYJA DNA-directed RNA polymerase subunit beta''...    46   1e-04
sp|P36044|MNN4_YEAST Protein MNN4 OS=Saccharomyces cerevisiae GN...    39   0.009
sp|Q5HZG4|TAF3_MOUSE Transcription initiation factor TFIID subun...    37   0.045
sp|Q5VWG9|TAF3_HUMAN Transcription initiation factor TFIID subun...    34   0.38 
sp|Q5EAW9|TAF3_XENLA Transcription initiation factor TFIID subun...    33   0.50 
sp|Q3MI48|JSPR1_MOUSE Junctional sarcoplasmic reticulum protein ...    32   1.1  
sp|Q28279|CNGA1_CANFA cGMP-gated cation channel alpha-1 OS=Canis...    32   1.1  
sp|Q9MTH5|YCF1_OENEH Putative membrane protein ycf1 OS=Oenothera...    32   1.9  
sp|A6MM95|YCF1_BUXMI Putative membrane protein ycf1 OS=Buxus mic...    32   1.9  
sp|Q6CTC3|NST1_KLULA Stress response protein NST1 OS=Kluyveromyc...    32   1.9  
sp|Q559A2|IRLA_DICDI Probable serine/threonine-protein kinase ir...    32   1.9  
sp|Q8ILR9|HLRR1_PLAF7 LRR domain-containing protein PF14_0175 OS...    32   1.9  
sp|A0AVI4|TM129_HUMAN Transmembrane protein 129 OS=Homo sapiens ...    31   3.3  
sp|P40631|MLH_TETTH Micronuclear linker histone polyprotein OS=T...    30   4.2  
sp|Q13127|REST_HUMAN RE1-silencing transcription factor OS=Homo ...    30   4.3  
sp|P42781|XPR6_YARLI Dibasic-processing endoprotease OS=Yarrowia...    30   5.5  
sp|Q5F489|TAF3_CHICK Transcription initiation factor TFIID subun...    30   5.5  
sp|Q5RDE1|IF2P_PONAB Eukaryotic translation initiation factor 5B...    30   5.5  
sp|Q8N7Z2|GG6L1_HUMAN Golgin subfamily A member 6-like protein 1...    30   5.6  
sp|Q8IM00|YPF03_PLAF7 Uncharacterized protein PF14_0093 OS=Plasm...    30   7.2  
sp|Q00383|YCF1_EPIVI Putative membrane protein ycf1 OS=Epifagus ...    30   7.2  
sp|Q54LT4|Y6968_DICDI Uncharacterized protein DDB_G0286423 OS=Di...    30   7.2  
sp|Q08696|MST2_DROHY Axoneme-associated protein mst101(2) OS=Dro...    30   7.2  
sp|Q28092|CYLC2_BOVIN Cylicin-2 OS=Bos taurus GN=CYLC2 PE=1 SV=1       30   7.2  
sp|P28569|TRK1_SACBA High-affinity potassium transport protein O...    29   9.4  
sp|Q54PB2|MRD1_DICDI Multiple RNA-binding domain-containing prot...    29   9.4  
sp|P15205|MAP1B_RAT Microtubule-associated protein 1B OS=Rattus ...    29   9.4  
sp|P32023|KGP25_DROME cGMP-dependent protein kinase, isozyme 2 f...    29   9.4  
sp|P13816|GARP_PLAFF Glutamic acid-rich protein OS=Plasmodium fa...    29   9.4  
sp|P29974|CNGA1_MOUSE cGMP-gated cation channel alpha-1 OS=Mus m...    29   9.4  

>sp|B1VKH5|RPOC2_CRYJA DNA-directed RNA polymerase subunit beta''
            OS=Cryptomeria japonica GN=rpoC2 PE=3 SV=1
          Length = 1212

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 28/49 (57%), Positives = 31/49 (63%)
 Frame = -3

Query: 191  LSYVRKRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENEKNKKETCK 45
            LS  +K   KNKKET K  +K E  KNKKET K  +K E  KNKKET K
Sbjct: 1158 LSLKQKETSKNKKETSK--NKKETSKNKKETSK--NKKETSKNKKETSK 1202



 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/51 (50%), Positives = 31/51 (60%)
 Frame = -3

Query: 197  RQLSYVRKRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENEKNKKETCK 45
            ++ S  +K   KNKKET K  +K E  KNKKET K  +K E  KNKKE  K
Sbjct: 1163 KETSKNKKETSKNKKETSK--NKKETSKNKKETSK--NKKETSKNKKEASK 1209


>sp|P36044|MNN4_YEAST Protein MNN4 OS=Saccharomyces cerevisiae GN=MNN4
            PE=2 SV=2
          Length = 1178

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = -3

Query: 212  PLLIIRQLSYV-----RKRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENEKNKKE 54
            P+++    +Y      RKRR K KKE  +   K E EK KKE  +   K E EK KKE
Sbjct: 1021 PIIVYEDYAYAKLLEERKRREKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKE 1078



 Score = 30.8 bits (68), Expect = 3.2
 Identities = 20/47 (42%), Positives = 24/47 (51%)
 Frame = -3

Query: 164  KNKKETCKLGDKSENEKNKKETCKLGDKLENEKNKKETCKLGGQELG 24
            K KKE  +   K E EK KKE  +   + E EK KKE  +   QE G
Sbjct: 1066 KKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEKKKQEEG 1112



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -3

Query: 164  KNKKETCKLGDKSENEKNKKETCKLGDKLENEKNKKE 54
            K KKE  +   K E EK KKE  +   K E EK K+E
Sbjct: 1058 KKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKQE 1094


>sp|Q5HZG4|TAF3_MOUSE Transcription initiation factor TFIID subunit
           3 OS=Mus musculus GN=Taf3 PE=1 SV=2
          Length = 932

 Score = 37.0 bits (84), Expect = 0.045
 Identities = 26/65 (40%), Positives = 35/65 (53%)
 Frame = -3

Query: 248 PEMLFSWSPMQ*PLLIIRQLSYVRKRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENE 69
           P ML ++SPM    L   +     K R K+KKE  K  +K E EK KKE  +  ++ E E
Sbjct: 676 PAMLPAFSPMLPEKLFEEKEKPKEKERKKDKKEKKKKKEK-EKEKEKKEREREKERRERE 734

Query: 68  KNKKE 54
           K +KE
Sbjct: 735 KREKE 739


>sp|Q5VWG9|TAF3_HUMAN Transcription initiation factor TFIID subunit
           3 OS=Homo sapiens GN=TAF3 PE=1 SV=1
          Length = 929

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 25/65 (38%), Positives = 32/65 (49%)
 Frame = -3

Query: 248 PEMLFSWSPMQ*PLLIIRQLSYVRKRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENE 69
           P ML S  P+    L   +     K + K+KKE  K   K E EK KKE  +  +K E E
Sbjct: 675 PAMLPSLLPVLPEKLFEEKEKVKEKEKKKDKKEKKK---KKEKEKEKKEKEREKEKRERE 731

Query: 68  KNKKE 54
           K +KE
Sbjct: 732 KREKE 736


>sp|Q5EAW9|TAF3_XENLA Transcription initiation factor TFIID subunit
           3 OS=Xenopus laevis GN=taf3 PE=2 SV=1
          Length = 845

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = -3

Query: 248 PEMLFSWSPMQ*PLLIIRQLSYVRKRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENE 69
           P +L S SP+    L   +     K + K+KKE  K  DK + ++ +KE  +   + E E
Sbjct: 597 PSLLSSMSPLLPEKLFEEKEKSKEKDKKKDKKEKKKKKDKEKVKEKEKEKKEKEKEKEKE 656

Query: 68  KNKKETCK 45
           K +KE  K
Sbjct: 657 KKEKEKVK 664


>sp|Q3MI48|JSPR1_MOUSE Junctional sarcoplasmic reticulum protein 1
           OS=Mus musculus GN=Jsrp1 PE=1 SV=2
          Length = 332

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -3

Query: 155 KETCKLGDKSENEKNKKETCKLGDKLENEKNKKE 54
           +E+  LGD+   EK +KE    G+KL+ EK ++E
Sbjct: 230 EESVPLGDRGSQEKPRKEKPSKGEKLKKEKPRRE 263


>sp|Q28279|CNGA1_CANFA cGMP-gated cation channel alpha-1 OS=Canis
           familiaris GN=CNGA1 PE=2 SV=1
          Length = 691

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 17/45 (37%), Positives = 30/45 (66%)
 Frame = -3

Query: 179 RKRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENEKNKKETCK 45
           ++++ K K++  K GDK+EN+K+  E  K  +K + +KNK+E  K
Sbjct: 101 KEKKKKKKEKKSKSGDKNENKKD-SEKKKKKEKEKEKKNKEEKGK 144


>sp|Q9MTH5|YCF1_OENEH Putative membrane protein ycf1 OS=Oenothera
            elata subsp. hookeri GN=ycf1 PE=3 SV=3
          Length = 2463

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = -3

Query: 179  RKRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENEKNKKETCK 45
            +++R K K E  K   K ENEK K ET +  +K+E EK KKE  K
Sbjct: 2091 KQKRKKEKIENAK--KKIENEKKKIETEE--EKIEKEKRKKERKK 2131


>sp|A6MM95|YCF1_BUXMI Putative membrane protein ycf1 OS=Buxus
           microphylla GN=ycf1-A PE=3 SV=1
          Length = 1859

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -3

Query: 158 KKETCKLGDKSENEKNKKETCKLGDKLENEKNK 60
           K    K+ D  E EKNKKET K  +K   EK +
Sbjct: 747 KNTELKISDYEEEEKNKKETEKKNEKKREEKTR 779


>sp|Q6CTC3|NST1_KLULA Stress response protein NST1 OS=Kluyveromyces
           lactis GN=NST1 PE=3 SV=1
          Length = 1299

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = -3

Query: 188 SYVRKRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENEKNKKETCKLGGQE 30
           SY  K   KN++      +  EN+K +KE  KL  K E EK KK   +L  +E
Sbjct: 676 SYQEKEAEKNRERLLMELEAEENQKKEKEKKKL-KKKEKEKEKKRQQQLAKEE 727
tr_hit_id Q4Z506
Definition tr|Q4Z506|Q4Z506_PLABE Putative uncharacterized protein (Fragment) OS=Plasmodium berghei
Align length 55
Score (bit) 42.4
E-value 0.012
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921750|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_G03.
         (478 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4Z506|Q4Z506_PLABE Putative uncharacterized protein (Fragmen...    42   0.012
tr|Q7RSE3|Q7RSE3_PLAYO Putative uncharacterized protein PY00416 ...    41   0.034
tr|B3L5J3|B3L5J3_PLAKH Protein phosphatase 2C, putative OS=Plasm...    40   0.058
tr|A5K710|A5K710_PLAVI Putative uncharacterized protein OS=Plasm...    39   0.098
tr|B5VLW5|B5VLW5_YEAS6 YKL201Cp-like protein (Fragment) OS=Sacch...    39   0.099
tr|B3LQQ7|B3LQQ7_YEAS1 Protein MNN4 OS=Saccharomyces cerevisiae ...    39   0.099
tr|A7A087|A7A087_YEAS7 Mannosyltransferase OS=Saccharomyces cere...    39   0.099
tr|A2ASY1|A2ASY1_MOUSE TAF3 RNA polymerase II, TATA box binding ...    37   0.49 
tr|A2ASY0|A2ASY0_MOUSE TAF3 RNA polymerase II, TATA box binding ...    37   0.49 
tr|Q7ZWL7|Q7ZWL7_XENLA MGC53453 protein OS=Xenopus laevis PE=2 SV=1    37   0.64 
tr|O96146|O96146_PLAF7 Putative uncharacterized protein PFB0225c...    37   0.64 
tr|A0BDG6|A0BDG6_PARTE Chromosome undetermined scaffold_100, who...    36   1.1  
tr|A6LYI1|A6LYI1_CLOB8 Putative uncharacterized protein OS=Clost...    35   1.9  
tr|Q7REM3|Q7REM3_PLAYO Putative uncharacterized protein PY05041 ...    35   1.9  
tr|Q4Y6I2|Q4Y6I2_PLACH Putative uncharacterized protein (Fragmen...    35   1.9  
tr|Q4V652|Q4V652_DROME IP05788p (IP05688p) (Fragment) OS=Drosoph...    35   1.9  
tr|A5K4S8|A5K4S8_PLAVI Putative uncharacterized protein OS=Plasm...    35   1.9  
tr|Q8IKJ5|Q8IKJ5_PLAF7 Putative uncharacterized protein OS=Plasm...    35   2.4  
tr|Q17AW4|Q17AW4_AEDAE Putative uncharacterized protein OS=Aedes...    35   2.4  
tr|B3L8J5|B3L8J5_PLAKH Putative uncharacterized protein OS=Plasm...    35   2.4  
tr|A0DPY6|A0DPY6_PARTE Chromosome undetermined scaffold_6, whole...    35   2.4  
tr|B5IUH0|B5IUH0_9EURY Rad50 zinc hook motif family OS=Thermococ...    35   2.4  
tr|Q1ENW1|Q1ENW1_MUSAC Putative uncharacterized protein OS=Musa ...    34   3.2  
tr|A9URG3|A9URG3_MONBE Predicted protein OS=Monosiga brevicollis...    34   3.2  
tr|Q9CJ28|Q9CJ28_LACLA Putative uncharacterized protein ybiC OS=...    34   4.1  
tr|A3Y6L6|A3Y6L6_9GAMM Putative uncharacterized protein OS=Marin...    34   4.2  
tr|Q7RLP9|Q7RLP9_PLAYO Putative uncharacterized protein PY02491 ...    34   4.2  
tr|Q7RF75|Q7RF75_PLAYO Putative uncharacterized protein PY04834 ...    34   4.2  
tr|Q7PDT1|Q7PDT1_PLAYO Formin Homology 2 Domain, putative (Fragm...    34   4.2  
tr|Q1JSS6|Q1JSS6_TOXGO Putative uncharacterized protein OS=Toxop...    34   4.2  

>tr|Q4Z506|Q4Z506_PLABE Putative uncharacterized protein (Fragment)
           OS=Plasmodium berghei GN=PB000726.00.0 PE=4 SV=1
          Length = 821

 Score = 42.4 bits (98), Expect = 0.012
 Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = -3

Query: 176 KRRIKNKKETCKLGDKSENEKNKKETCKL-GDKLENEKNKKETCKLGGQELGRMC 15
           K+ I NKK+T K  +K E EKNKKET K   DK+ N+  K E  K+ G+E+ + C
Sbjct: 354 KKLILNKKKTNKQ-EKHETEKNKKETSKTSNDKISND-TKNEDTKIKGEEIVKEC 406


>tr|Q7RSE3|Q7RSE3_PLAYO Putative uncharacterized protein PY00416
            (Fragment) OS=Plasmodium yoelii yoelii GN=PY00416 PE=4
            SV=1
          Length = 3171

 Score = 40.8 bits (94), Expect = 0.034
 Identities = 23/54 (42%), Positives = 32/54 (59%)
 Frame = -3

Query: 176  KRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENEKNKKETCKLGGQELGRMC 15
            K+ I NKK+T K  +K E EKNKKET K  +   +   K E  K+ G+E+ + C
Sbjct: 993  KKLILNKKKTNKQ-EKHETEKNKKETNKTSNVKISNDTKNEDTKINGEEIIKEC 1045


>tr|B3L5J3|B3L5J3_PLAKH Protein phosphatase 2C, putative
           OS=Plasmodium knowlesi (strain H) GN=PKH_093630 PE=4
           SV=1
          Length = 860

 Score = 40.0 bits (92), Expect = 0.058
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = -3

Query: 176 KRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENEKNKK 57
           K  IK + E CK  +K+E++K K  TCK+    E EKNK+
Sbjct: 289 KGAIKGEVEKCKKDEKTEDDKEKNSTCKIEKTNEEEKNKE 328


>tr|A5K710|A5K710_PLAVI Putative uncharacterized protein
           OS=Plasmodium vivax GN=PVX_099900 PE=4 SV=1
          Length = 206

 Score = 39.3 bits (90), Expect = 0.098
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -1

Query: 172 GE*RIRKKPVSWETNQRMRRIRKKPVSWETNWRMRRIRKKPASLEDK 32
           G+ R+ K+P  W T +  +R+ K+P  W T    +R+ K+P     K
Sbjct: 123 GKRRLMKRPTKWPTKRPTKRLMKRPTKWPTKRPTKRLTKRPTKRPTK 169


>tr|B5VLW5|B5VLW5_YEAS6 YKL201Cp-like protein (Fragment)
            OS=Saccharomyces cerevisiae (strain AWRI1631)
            GN=AWRI1631_110260 PE=4 SV=1
          Length = 1086

 Score = 39.3 bits (90), Expect = 0.099
 Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = -3

Query: 212  PLLIIRQLSYV-----RKRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENEKNKKE 54
            P+++    +Y      RKRR K KKE  +   K E EK KKE  +   K E EK KKE
Sbjct: 1021 PIIVYEDYAYAKLLEERKRREKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKE 1078


>tr|B3LQQ7|B3LQQ7_YEAS1 Protein MNN4 OS=Saccharomyces cerevisiae
            (strain RM11-1a) GN=SCRG_03829 PE=4 SV=1
          Length = 1155

 Score = 39.3 bits (90), Expect = 0.099
 Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = -3

Query: 212  PLLIIRQLSYV-----RKRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENEKNKKE 54
            P+++    +Y      RKRR K KKE  +   K E EK KKE  +   K E EK KKE
Sbjct: 1021 PIIVYEDYAYAKLLEERKRREKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKE 1078


>tr|A7A087|A7A087_YEAS7 Mannosyltransferase OS=Saccharomyces
            cerevisiae (strain YJM789) GN=MNN4 PE=4 SV=1
          Length = 1171

 Score = 39.3 bits (90), Expect = 0.099
 Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = -3

Query: 212  PLLIIRQLSYV-----RKRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENEKNKKE 54
            P+++    +Y      RKRR K KKE  +   K E EK KKE  +   K E EK KKE
Sbjct: 1021 PIIVYEDYAYAKLLEERKRREKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKE 1078


>tr|A2ASY1|A2ASY1_MOUSE TAF3 RNA polymerase II, TATA box binding
           protein (TBP)-associated factor OS=Mus musculus GN=Taf3
           PE=2 SV=1
          Length = 932

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 26/65 (40%), Positives = 35/65 (53%)
 Frame = -3

Query: 248 PEMLFSWSPMQ*PLLIIRQLSYVRKRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENE 69
           P ML ++SPM    L   +     K R K+KKE  K  +K E EK KKE  +  ++ E E
Sbjct: 676 PAMLPAFSPMLPEKLFEEKEKPKEKERKKDKKEKKKKKEK-EKEKEKKEREREKERRERE 734

Query: 68  KNKKE 54
           K +KE
Sbjct: 735 KREKE 739


>tr|A2ASY0|A2ASY0_MOUSE TAF3 RNA polymerase II, TATA box binding
           protein (TBP)-associated factor OS=Mus musculus GN=Taf3
           PE=4 SV=1
          Length = 779

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 26/65 (40%), Positives = 35/65 (53%)
 Frame = -3

Query: 248 PEMLFSWSPMQ*PLLIIRQLSYVRKRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENE 69
           P ML ++SPM    L   +     K R K+KKE  K  +K E EK KKE  +  ++ E E
Sbjct: 523 PAMLPAFSPMLPEKLFEEKEKPKEKERKKDKKEKKKKKEK-EKEKEKKEREREKERRERE 581

Query: 68  KNKKE 54
           K +KE
Sbjct: 582 KREKE 586


>tr|Q7ZWL7|Q7ZWL7_XENLA MGC53453 protein OS=Xenopus laevis PE=2 SV=1
          Length = 502

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 27/73 (36%), Positives = 32/73 (43%)
 Frame = -3

Query: 230 WSPMQ*PLLIIRQLSYVRKRRIKNKKETCKLGDKSENEKNKKETCKLGDKLENEKNKKET 51
           WSP      I  Q  YV    I NKK T +LGD  E E      CK G  L+ + N+   
Sbjct: 254 WSPEPMCYEITCQADYVANGFITNKKNTYRLGDTVEVE------CKHGFSLD-KPNEPRI 306

Query: 50  CKLGGQELGRMCL 12
           C L G  L   C+
Sbjct: 307 CTLNGWSLPLTCI 319