BP921752 |
Clone id |
YMU001_000153_G05 |
Library |
YMU01 |
Length |
548 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000153_G05. |
Accession |
BP921752 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTACTCGGACGATACCAGCCACCAGAAATCAGCATCTACCACACTCAGCTGATCAGAGGA TGGATGACTCGATACAAAATTGCGCAGCGATGTCCCTGAGTTGAAATAAAGATGGGGGTT GTTAACCTCCTTCCAGCATGCGCTCCTGGACTCAAAGAACTCGAAAGAAGTCGGAAAAAG AAAACAAGTATTGAGGAGAATGTAGTAACAGCTTGGATCCTTTCCATTGCGGGTCGTGGA GAGGTAAAAAGTATTGGGGCCTTGCATAGAGAGCGAGGGAGGAGGGAGCGGGAGCACTTT GACAGACCCAGTGAGGCAGTTGAAAACGATAAAGTCGTAGGACTCCGCTGCATCAGGCCT GCGCACAATGGCTGAGATGAGGCCTCCTGCAGAGCAAAGAAAGAGGTCGTGAAAAAAGGG GGCATCAATGTCCATATACTTGAGTCTGTGGGCCACGTGAGAGCAATTGCGGCCACCCAG TAAGGCAGAGAACAGGGTTGGGAAGGGGAGGCCGGAAGAAAGCCTTCTGTTCAAGCTCTG AGGTTTCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P57094 |
Definition |
sp|P57094|AXN1_DANRE Axin-1 OS=Danio rerio |
Align length |
49 |
Score (bit) |
31.6 |
E-value |
2.6 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q95YK1 |
Definition |
tr|Q95YK1|Q95YK1_CIOSA Protocadherin OS=Ciona savignyi |
Align length |
83 |
Score (bit) |
36.2 |
E-value |
1.2 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921752|Adiantum capillus-veneris mRNA, clone: YMU001_000153_G05. (548 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q95YK1|Q95YK1_CIOSA Protocadherin OS=Ciona savignyi PE=2 SV=1 36 1.2 tr|P95985|P95985_SULSO Orf c04047 protein OS=Sulfolobus solfatar... 35 2.0 tr|A3E3K3|A3E3K3_PFIPI TB2/DP1 HVA22 family protein OS=Pfiesteri... 35 2.6 tr|B1TG79|B1TG79_9BURK Putative uncharacterized protein OS=Burkh... 35 3.4 tr|B1FRF3|B1FRF3_9BURK Putative uncharacterized protein OS=Burkh... 35 3.4 tr|A8IEE8|A8IEE8_CHLRE Predicted protein OS=Chlamydomonas reinha... 35 3.4 tr|B7Y1S8|B7Y1S8_RUMHA Putative uncharacterized protein OS=Blaut... 34 4.4 tr|B1FRP3|B1FRP3_9BURK Putative uncharacterized protein OS=Burkh... 34 4.4 tr|Q58SZ6|Q58SZ6_9ACTO Rep OS=Micromonospora rosaria GN=rep PE=4... 34 5.8 tr|B1TGS4|B1TGS4_9BURK Putative uncharacterized protein OS=Burkh... 34 5.8 tr|B5CTM7|B5CTM7_9BACE Putative uncharacterized protein OS=Bacte... 33 7.5 tr|A4U3H0|A4U3H0_9PROT Sensor protein OS=Magnetospirillum gryphi... 33 9.8 tr|A8N0Q5|A8N0Q5_COPC7 Predicted protein OS=Coprinopsis cinerea ... 33 9.8
>tr|Q95YK1|Q95YK1_CIOSA Protocadherin OS=Ciona savignyi PE=2 SV=1 Length = 1177
Score = 36.2 bits (82), Expect = 1.2 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%) Frame = -3
Query: 456 VAHRLKYMDIDAPFFH--DLFLCSAGGLISAIVRRPDAAESYDFIVFNCLTGSVKVXXXX 283 V R++ +D D+P F ++ L S GL S + D E Y F V + TG +++ Sbjct: 620 VITRIQAVDYDSPMFSKVEISLLSVDGLKST--QETDGVEPYSFFVLDRATGDLRLNMST 677
Query: 282 XXXXSMQGPNTFYLSTTRNGKDP 214 + G + + T NG+ P Sbjct: 678 ADLNDIVGSHVIVVKATDNGQPP 700
>tr|P95985|P95985_SULSO Orf c04047 protein OS=Sulfolobus solfataricus GN=orf c04047 PE=4 SV=1 Length = 126
Score = 35.4 bits (80), Expect = 2.0 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%) Frame = -1
Query: 488 LPYWVAAIALTWPTDSSIWTLMPPFFTTSF-----FALQEASSQPLCAGLMQRSPTTLSF 324 +P ++A +A+ P S+ ++ PFFT F + + PL +SP L+ Sbjct: 11 IPLYIAVVAIVPPPFPSVMSIFSPFFTLFLKKSLDFNIPIEPTAPLILSPKTKSPPILNV 70
Query: 323 STASLGLSK 297 AS+G+SK Sbjct: 71 LPASIGISK 79
>tr|A3E3K3|A3E3K3_PFIPI TB2/DP1 HVA22 family protein OS=Pfiesteria piscicida PE=2 SV=1 Length = 131
Score = 35.0 bits (79), Expect = 2.6 Identities = 18/64 (28%), Positives = 28/64 (43%) Frame = -1
Query: 509 SPSQPCSLPYWVAAIALTWPTDSSIWTLMPPFFTTSFFALQEASSQPLCAGLMQRSPTTL 330 +P++ L YW+ + ++W T W L PF+ SF + LC L P+ L Sbjct: 32 TPARKTWLCYWIGYVLVSWLTYYFEWVLRCPFYMLSFVFVDLYCEAQLCLVLYLVLPSVL 91
Query: 329 SFST 318 T Sbjct: 92 GIET 95
>tr|B1TG79|B1TG79_9BURK Putative uncharacterized protein OS=Burkholderia ambifaria MEX-5 GN=BamMEX5DRAFT_6795 PE=4 SV=1 Length = 358
Score = 34.7 bits (78), Expect = 3.4 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 7/91 (7%) Frame = -1
Query: 506 PSQPCSLPYWVAAIAL---TWPTDSSIWTLMPPFFTTSFFALQEASS----QPLCAGLMQ 348 P +LP A + TWPT S M FT S+ A + S+ P+ +++ Sbjct: 156 PMMSTTLPELAAMSCIVDTTWPTTSPPCVAMSDAFTASWLACRAFSAFWRTVPVSCSMLE 215
Query: 347 RSPTTLSFSTASLGLSKCSRSLLPRSLCKAP 255 +S S A+ +C RS+LP + +AP Sbjct: 216 ----AVSCSDAACSSVRCDRSVLPVEISRAP 242
>tr|B1FRF3|B1FRF3_9BURK Putative uncharacterized protein OS=Burkholderia ambifaria IOP40-10 GN=BamIOP4010DRAFT_6614 PE=4 SV=1 Length = 372
Score = 34.7 bits (78), Expect = 3.4 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 7/91 (7%) Frame = -1
Query: 506 PSQPCSLPYWVAAIAL---TWPTDSSIWTLMPPFFTTSFFALQEASS----QPLCAGLMQ 348 P +LP A + TWPT S M FT S+ A + S+ P+ +++ Sbjct: 156 PMMSTTLPELAAMSCIVDTTWPTTSPPCVAMSDAFTASWLACRAFSAFWRTVPVSCSMLE 215
Query: 347 RSPTTLSFSTASLGLSKCSRSLLPRSLCKAP 255 +S S A+ +C RS+LP + +AP Sbjct: 216 ----AVSCSDAACSSVRCDRSVLPVEISRAP 242
>tr|A8IEE8|A8IEE8_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_143922 PE=4 SV=1 Length = 1367
Score = 34.7 bits (78), Expect = 3.4 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Frame = -1
Query: 449 TDSSIWTLM----PPFFTTSFFALQEASSQPLCAGLMQRSPTTLSFSTASLGLSKCSRSL 282 T+S W M PP S A A ++ LC+G + R P S +S G SKCS L Sbjct: 783 TESDSWPAMLAHAPPAQVASLVATLAAVARRLCSGSLLRPP---SSGGSSAGSSKCSSGL 839
Query: 281 LP 276 +P Sbjct: 840 VP 841
>tr|B7Y1S8|B7Y1S8_RUMHA Putative uncharacterized protein OS=Blautia hansenii DSM 20583 GN=BLAHAN_01965 PE=4 SV=1 Length = 527
Score = 34.3 bits (77), Expect = 4.4 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = -3
Query: 513 GLPFPTL-FSALLGGRNCSHVAHRLKYMDIDAPFFHDLFLCSAGGLISAIVRRP 355 G+ FP L ALLGG ++ ++YM +DA + ++ L + G +AIVR P Sbjct: 337 GIFFPLLVLGALLGG---AYSTFAVQYMGLDASYISNMVLLAMAGYFTAIVRAP 387
>tr|B1FRP3|B1FRP3_9BURK Putative uncharacterized protein OS=Burkholderia ambifaria IOP40-10 GN=BamIOP4010DRAFT_6706 PE=4 SV=1 Length = 126
Score = 34.3 bits (77), Expect = 4.4 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 5/88 (5%) Frame = -1
Query: 467 IALTWPTDSSIWTLMPPFFTTSFFALQEASSQPLCAGLMQRSPTTLSFSTASLGLSKCS- 291 + TWPT T++P F + FA E + + L A + S CS Sbjct: 28 VPTTWPT-----TVLPLFAISDAFAASELACRALSAFCFTVPVSCSMLDAVSCSADACSS 82
Query: 290 ----RSLLPRSLCKAPILFTSPRPAMER 219 RS+LP ++C+A + S P R Sbjct: 83 VRDDRSMLPAAICRAAVAIDSLPPRTVR 110
>tr|Q58SZ6|Q58SZ6_9ACTO Rep OS=Micromonospora rosaria GN=rep PE=4 SV=1 Length = 582
Score = 33.9 bits (76), Expect = 5.8 Identities = 21/61 (34%), Positives = 26/61 (42%) Frame = +3
Query: 336 RRTPLHQACAQWLR*GLLQSKERGREKRGHQCPYT*VCGPRESNCGHPVRQRTGLGRGGR 515 R TP ++ CA WL G+ K GR + G C V QR LG GGR Sbjct: 431 RVTPCNERCANWLLYGVQPKKAHGRLQAG--------------RCKGKVHQRATLGIGGR 476
Query: 516 K 518 + Sbjct: 477 R 477
>tr|B1TGS4|B1TGS4_9BURK Putative uncharacterized protein OS=Burkholderia ambifaria MEX-5 GN=BamMEX5DRAFT_6990 PE=4 SV=1 Length = 444
Score = 33.9 bits (76), Expect = 5.8 Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 5/88 (5%) Frame = -1
Query: 467 IALTWPTDSSIWTLMPPFFTTSFFALQEASSQPLCAGLMQRSPTTLSFSTASLGLSKCS- 291 + TWPT T++P F + FA E + + L A S CS Sbjct: 79 VPTTWPT-----TVLPLFAISDAFAASELACRALSAFCFTVPVNCSMLDAVSCNADACSS 133
Query: 290 ----RSLLPRSLCKAPILFTSPRPAMER 219 RS+LP ++C+A + S P R Sbjct: 134 VRDDRSMLPAAICRAAVAIDSLPPRTVR 161
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