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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921754
Clone id YMU001_000153_G07
Library
Length 563
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000153_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCCAAAAGACTCATCTTGGCTAGTTGCATAAGACACTGAAACTTTCATCTTTGTAGGTAG
GAAATGCTATCGAATACGACTAGAGTACATAAATGCTGCCACCGCTGACATCTTCTTATC
CAAAAGAAAAGACCGCTGAGGAAGCCAAAAGCTTGGAAGACAGACGAAGGGAGAATACTG
CCGATGGATGACTCCTCTGGTGCATGCTGAGGAAGCAAGCAGGTGCTTATATGAATATTA
GCAACATAGGTTAACTGGGTTTGATTCAAGCTTCAAACGCTCCATAGAGCCAAAGGAGCC
GAGCTAAAGCAGAGAGTTGAGAAGCTCTGCAACGCGTTTACCAGAAGAATGACATCCATA
GAATCTGGGGCAACGAAGTCAACCAAAAGTAATAGAGAGAAACAGTACCTGCAGGCTGCA
GGCCATACTCTCATACCGATTAGGAAGAGAGACGTTTAAAGGAAAGAGGCTCGGCGCCGC
TATTGATGGTAGGTGGATCTGCTCTGACATCGTGCTGGCTCTCGTGGGTTCTTGGAGGGT
CGCACCTGATTTTGTCGTATGAT
■■Homology search results ■■ -
sp_hit_id Q6DE55
Definition sp|Q6DE55|HMHA1_XENLA Minor histocompatibility protein HA-1 OS=Xenopus laevis
Align length 59
Score (bit) 33.5
E-value 0.74
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921754|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_G07.
         (563 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6DE55|HMHA1_XENLA Minor histocompatibility protein HA-1 OS=X...    33   0.74 
sp|Q9P107|GMIP_HUMAN GEM-interacting protein OS=Homo sapiens GN=...    30   6.3  
sp|P78898|TGCE2_SCHPO Probable lipase C16A3.12c OS=Schizosacchar...    30   8.2  

>sp|Q6DE55|HMHA1_XENLA Minor histocompatibility protein HA-1
           OS=Xenopus laevis GN=hmha1 PE=2 SV=1
          Length = 1107

 Score = 33.5 bits (75), Expect = 0.74
 Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +1

Query: 271 LQTLHRAKGAELKQRVEKLCNAFTRRMTSIE-SGATKSTKSNREKQYLQAAGHTLIPIR 444
           ++ ++R  G  +K RVEKLC AF      +E S A+    SN  K YL+     LIP R
Sbjct: 761 MKGIYRVNG--VKTRVEKLCQAFENGKELVELSQASPHDLSNVLKLYLRQLPEPLIPFR 817


>sp|Q9P107|GMIP_HUMAN GEM-interacting protein OS=Homo sapiens
           GN=GMIP PE=1 SV=2
          Length = 970

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +1

Query: 271 LQTLHRAKGAELKQRVEKLCNAFTRRMTSIE-SGATKSTKSNREKQYLQAAGHTLIPIRK 447
           +Q ++R  G+ +  RVE+LC AF      +E SG +    S+  K++LQ     +IP   
Sbjct: 582 VQGIYRVSGSRV--RVERLCQAFENGRALVELSGNSPHDVSSVLKRFLQELTEPVIPFHL 639

Query: 448 RD 453
            D
Sbjct: 640 YD 641


>sp|P78898|TGCE2_SCHPO Probable lipase C16A3.12c
           OS=Schizosaccharomyces pombe GN=SPBC16A3.12c PE=2 SV=2
          Length = 443

 Score = 30.0 bits (66), Expect = 8.2
 Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 11/124 (8%)
 Frame = -1

Query: 401 FSLLLLVDFVAPDSMDVILLVNALQSFSTLCFSSAPLALWSV*SLNQTQLTYVANIHIST 222
           FSL  +  F  PD++D IL     +  + + FS       +  S+N   L    NI I  
Sbjct: 178 FSLDDMAMFDIPDTVDYILRETGREKLNYIGFSQGTAQAMAALSIN-PDLNDKVNIFIG- 235

Query: 221 CLLPQHAPEESS------IGSILPSSVFQAFGFLSGLFFWIRRC-----QRWQHLCTLVV 75
            L P +AP+  S      I  + P  ++  FG         RRC       WQ++C   +
Sbjct: 236 -LAPAYAPKGFSNYFVDYIVKVNPKIMYHLFG---------RRCLLPSVTFWQNICYPPI 285

Query: 74  FDSI 63
           F  I
Sbjct: 286 FVKI 289
tr_hit_id A7K2S3
Definition tr|A7K2S3|A7K2S3_9VIBR MazG nucleotide pyrophosphohydrolase domain family OS=Vibrio sp. Ex25
Align length 49
Score (bit) 38.5
E-value 0.25
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921754|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_G07.
         (563 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7K2S3|A7K2S3_9VIBR MazG nucleotide pyrophosphohydrolase doma...    39   0.25 
tr|Q1V9Q2|Q1V9Q2_VIBAL MazG-related protein OS=Vibrio alginolyti...    37   0.74 
tr|Q87I30|Q87I30_VIBPA MazG-related protein OS=Vibrio parahaemol...    36   1.7  
tr|A6AYC7|A6AYC7_VIBPA MazG-related protein OS=Vibrio parahaemol...    36   1.7  
tr|A3B3E7|A3B3E7_ORYSJ Putative uncharacterized protein OS=Oryza...    35   2.2  
tr|B2VSP6|B2VSP6_PYRTR Putative uncharacterized protein OS=Pyren...    34   6.3  
tr|B0JZA0|B0JZA0_XENTR Hmha1 protein OS=Xenopus tropicalis GN=hm...    33   8.2  

>tr|A7K2S3|A7K2S3_9VIBR MazG nucleotide pyrophosphohydrolase domain
           family OS=Vibrio sp. Ex25 GN=VEx25_A0596 PE=4 SV=1
          Length = 129

 Score = 38.5 bits (88), Expect = 0.25
 Identities = 18/49 (36%), Positives = 31/49 (63%)
 Frame = +1

Query: 271 LQTLHRAKGAELKQRVEKLCNAFTRRMTSIESGATKSTKSNREKQYLQA 417
           L+ L R KG E ++ +E+ CN + +R+++IESG +      ++KQ L A
Sbjct: 68  LKALEREKGIEPEKVLERACNKYDQRVSAIESGRSWDEVKQQQKQALNA 116


>tr|Q1V9Q2|Q1V9Q2_VIBAL MazG-related protein OS=Vibrio alginolyticus
           12G01 GN=V12G01_09035 PE=4 SV=1
          Length = 129

 Score = 37.0 bits (84), Expect = 0.74
 Identities = 17/49 (34%), Positives = 31/49 (63%)
 Frame = +1

Query: 271 LQTLHRAKGAELKQRVEKLCNAFTRRMTSIESGATKSTKSNREKQYLQA 417
           L+ L R KG + ++ +E+ CN + +R+++IESG +      ++KQ L A
Sbjct: 68  LKALEREKGIDPEKVLERACNKYDQRVSAIESGRSWDEIKQQQKQALNA 116


>tr|Q87I30|Q87I30_VIBPA MazG-related protein OS=Vibrio
           parahaemolyticus GN=VPA0776 PE=4 SV=1
          Length = 129

 Score = 35.8 bits (81), Expect = 1.7
 Identities = 17/49 (34%), Positives = 30/49 (61%)
 Frame = +1

Query: 271 LQTLHRAKGAELKQRVEKLCNAFTRRMTSIESGATKSTKSNREKQYLQA 417
           L+TL R KG + ++ +E+ C  + +R++ IESG +      ++KQ L A
Sbjct: 68  LKTLEREKGIDPEKVLERACTKYEQRVSVIESGRSWDEVKQQQKQALNA 116


>tr|A6AYC7|A6AYC7_VIBPA MazG-related protein OS=Vibrio
           parahaemolyticus AQ3810 GN=A79_1523 PE=4 SV=1
          Length = 129

 Score = 35.8 bits (81), Expect = 1.7
 Identities = 17/49 (34%), Positives = 30/49 (61%)
 Frame = +1

Query: 271 LQTLHRAKGAELKQRVEKLCNAFTRRMTSIESGATKSTKSNREKQYLQA 417
           L+TL R KG + ++ +E+ C  + +R++ IESG +      ++KQ L A
Sbjct: 68  LKTLEREKGIDPEKVLERACTKYEQRVSVIESGRSWDEVKQQQKQALNA 116


>tr|A3B3E7|A3B3E7_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_017569 PE=4 SV=1
          Length = 1644

 Score = 35.4 bits (80), Expect = 2.2
 Identities = 16/51 (31%), Positives = 34/51 (66%)
 Frame = -1

Query: 395  LLLLVDFVAPDSMDVILLVNALQSFSTLCFSSAPLALWSV*SLNQTQLTYV 243
            +L++    APD    ILL++AL +++++   S P+A+W++   N+T+L ++
Sbjct: 1005 VLVMAWLSAPDKY-TILLMSALHNYTSVTLQSLPVAVWTIWPTNRTKLIWI 1054


>tr|B2VSP6|B2VSP6_PYRTR Putative uncharacterized protein
           OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
           GN=PTRG_01802 PE=4 SV=1
          Length = 369

 Score = 33.9 bits (76), Expect = 6.3
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -1

Query: 248 YVANIHISTCL-LPQHAPEES-SIGSILPSSVFQAFGFLSGLFFW 120
           Y AN  IS  +  P+H PE+   I S      F+AFG ++G+F W
Sbjct: 211 YTANAFISLGMQAPKHVPEDLFGITSFPVGDAFKAFGLIAGIFLW 255


>tr|B0JZA0|B0JZA0_XENTR Hmha1 protein OS=Xenopus tropicalis GN=hmha1
           PE=2 SV=1
          Length = 1004

 Score = 33.5 bits (75), Expect = 8.2
 Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +1

Query: 271 LQTLHRAKGAELKQRVEKLCNAFTRRMTSIE-SGATKSTKSNREKQYLQAAGHTLIPIR 444
           ++ ++R  G  +K RVEKLC AF      +E S A+    SN  K YL+     LIP R
Sbjct: 657 MKGIYRVNG--VKTRVEKLCQAFENGKELVELSQASPHDLSNVLKLYLRQLPEPLIPFR 713