BP921764
Clone id YMU001_000153_H05
Library
Length 518
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000153_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTTTTTTTTTTTACAGAAATTTAAATCGTACCTTTCAAGCCAGATACTCGCAAAT
AAACAAAGAGGAGATTCTTACATCTCACAATAAATAGCCAATATCATTTGCTCCTGCAGT
TGATGTGGTTCCCTTGCTCTCAGATAAATAAATGGGTCTAATGCTCCAACCATTGGAGGA
CTCGCCAACAGCCGTAATTCCTTATGGCTTTGGAAAACAGCCAAAACCATGGAGACATAC
TGATGCAAGTTTGTGTGTATACTATGAGAAATCAGGGAATATGGCAAAACGTGATCAGCA
GTCATACAATCAAATAGGTGCCTTTTGTCCCTTGCATCCAATAAAGCAGGGTAAGCCTCA
AGAAACAGCTTATTCTCTTCAAACATTAAGGAGCTCTTCCCGTCCTCGGATTCATAGGTC
CAATGATGTCTTGCCACCACTACATACAGTGGTCTGCCTCTGCACAGACGCAAGCAAAGC
CTTCTGAGCGAGGATCAGTGCATGTTCCTCAACCAACC
■■Homology search results ■■ -
sp_hit_id Q66431
Definition sp|Q66431|RRPL_DUGBV RNA-directed RNA polymerase OS=Dugbe virus
Align length 49
Score (bit) 32.3
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921764|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_H05.
(501 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q66431|RRPL_DUGBV RNA-directed RNA polymerase OS=Dugbe virus ... 32 1.3
sp|P25464|ACVS_CEPAC N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-... 32 2.1
sp|Q7VBZ8|ARGC_PROMA N-acetyl-gamma-glutamyl-phosphate reductase... 31 3.7
sp|Q6CHN0|SLA1_YARLI Actin cytoskeleton-regulatory complex prote... 30 8.2
sp|P55849|DSC1_MOUSE Desmocollin-1 OS=Mus musculus GN=Dsc1 PE=1 ... 30 8.3

>sp|Q66431|RRPL_DUGBV RNA-directed RNA polymerase OS=Dugbe virus
GN=L PE=3 SV=1
Length = 4036

Score = 32.3 bits (72), Expect = 1.3
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -1

Query: 414 RHHWTYESEDGKSSLMFEENKLFLEAYPALLDARDKRHLFDCMTADHVL 268
++ W+Y SED K SL LF E++ A LD F +T D+ L
Sbjct: 647 QYGWSYISEDIKPSLTMIVQTLFPESFEAFLDRTQLHPEFRDLTPDYAL 695


>sp|P25464|ACVS_CEPAC
N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine
synthase OS=Cephalosporium acremonium GN=PCBAB PE=1 SV=1
Length = 3712

Score = 31.6 bits (70), Expect = 2.1
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3

Query: 312 PLHPIKQGKPQETAYSLQTLRSSSRPRIHRSNDVLPPLHTVVCLCTDASKAF 467
P+HP+ KP + AY + T ++ P+ V+ H VV LC + F
Sbjct: 1496 PVHPVSNCKPSDLAYIMYTSGTTGNPK-----GVMVEHHGVVNLCVSLCRLF 1542


>sp|Q7VBZ8|ARGC_PROMA N-acetyl-gamma-glutamyl-phosphate reductase
OS=Prochlorococcus marinus GN=argC PE=3 SV=1
Length = 359

Score = 30.8 bits (68), Expect = 3.7
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = -1

Query: 309 KRHLFDCMTADHVLPYSLISHSIHTNLHQYVSMVLAVFQSHKELRLLASP---PMVGALD 139
K HL +++ V PYS++ H + + Q +S + S +++ +P PMV L
Sbjct: 201 KEHLLLAESSESVEPYSVVGHRHTSEIEQELSNL-----SGSNIQIQFTPHLVPMVRGLL 255

Query: 138 PFIYLRAREP 109
+Y R R+P
Sbjct: 256 STVYARLRDP 265


>sp|Q6CHN0|SLA1_YARLI Actin cytoskeleton-regulatory complex protein
SLA1 OS=Yarrowia lipolytica GN=SLA1 PE=3 SV=1
Length = 1136

Score = 29.6 bits (65), Expect = 8.2
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Frame = +3

Query: 33 YSQINKEEILTSHNK*PISFAPAVDVVPLLSDK*MGLMLQPLEDSPTAVI-PYGFGK--- 200
+S ++K++ P+ P V P+ + + QP++ PTA I P G
Sbjct: 686 WSSLDKQQAPPQQQAPPVQQQPPVQQQPIQAQPTAPIQQQPIQAQPTAPIQPVRTGSIND 745

Query: 201 --QPKPWRHTDASLCVYYEKSGNMAKRDQQSYNQ 296
KP + T S + + +G + + QQ Y Q
Sbjct: 746 LMNIKPLQPTPTSSNLQTQATGGIMQPIQQQYTQ 779


>sp|P55849|DSC1_MOUSE Desmocollin-1 OS=Mus musculus GN=Dsc1 PE=1
SV=1
Length = 886

Score = 29.6 bits (65), Expect = 8.3
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -1

Query: 405 WTYESEDGKSSLMFEENKLFLEAYPALLDARDKRHLFDCMTADHVL 268
WT ES+DGK +++ + + L Y + +D RH F +A HVL
Sbjct: 619 WTLESQDGKRAILRQRHNLNYNYYSVPIQIQD-RHGF---SAKHVL 660


tr_hit_id A7RRK8
Definition tr|A7RRK8|A7RRK8_NEMVE Predicted protein OS=Nematostella vectensis
Align length 97
Score (bit) 33.5
E-value 5.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921764|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_H05.
(501 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7RRK8|A7RRK8_NEMVE Predicted protein OS=Nematostella vectens... 33 5.8
tr|Q2C9Z6|Q2C9Z6_9RHOB Multidrug efflux pump, Major Facilitator ... 33 9.7
tr|B8ET61|B8ET61_METSI Putative uncharacterized protein OS=Methy... 33 9.7
tr|B8MJW1|B8MJW1_9EURO Putative uncharacterized protein OS=Talar... 33 9.7

>tr|A7RRK8|A7RRK8_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g91194 PE=4 SV=1
Length = 563

Score = 33.5 bits (75), Expect = 5.8
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Frame = -1

Query: 330 ALLDARDKRHLFDCMTADHVLPYSLISHSIHTNLHQYVSMVLAVFQSHKELRLLA----- 166
A+ RDK L T D VL SL+SH + Q++S + A+F+S + +A
Sbjct: 326 AIFFNRDKFELIK--TCDVVLRESLLSHLSQEEILQHISPIPALFESLIKRNAIAQVAVL 383

Query: 165 -------SPPMVGALDPFIYLRAREPH--QLQEQMIL 82
+ P++ ++ +Y R PH LQ +IL
Sbjct: 384 KCKGNNDNSPLICVVNTHLYYRPHSPHIRMLQAAIIL 420


>tr|Q2C9Z6|Q2C9Z6_9RHOB Multidrug efflux pump, Major Facilitator
Superfamily protein (MFS) OS=Oceanicola granulosus
HTCC2516 GN=OG2516_00294 PE=4 SV=1
Length = 385

Score = 32.7 bits (73), Expect = 9.7
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = -2

Query: 416 QDIIGPMNPRTGRAP*CLKRISCFLRLTLLYWMQGTKGTYLIV*LL 279
Q +IGP++ R GR P L ++ FL TL M + GT+L+ +L
Sbjct: 48 QIVIGPVSDRFGRRPVVLGALAIFLAATLGCLMAQSAGTFLLFRML 93


>tr|B8ET61|B8ET61_METSI Putative uncharacterized protein
OS=Methylocella silvestris BL2 GN=Msil_2265 PE=4 SV=1
Length = 272

Score = 32.7 bits (73), Expect = 9.7
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Frame = +3

Query: 105 DVVPLLSDK*MG------LMLQPLEDSPTAVIPYGFGKQPKPWR-HTDASLCVYYEKSGN 263
D++P L D+ + L PL D PT FG P++ + +A Y+ ++G
Sbjct: 178 DIIPGLLDRFVARPRHILLNKVPLTDGPTFWTLQNFGSAVSPYQVYNEAEFFEYFAEAGY 237

Query: 264 MAKRDQQSYNQIGAFCPLHP 323
RD+ +++ F P HP
Sbjct: 238 RL-RDRWDVHELDCFIPFHP 256


>tr|B8MJW1|B8MJW1_9EURO Putative uncharacterized protein
OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_042520 PE=4
SV=1
Length = 1044

Score = 32.7 bits (73), Expect = 9.7
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = -2

Query: 419 WQDIIGPMNPRTGRAP*CLKRISCFLRLTLLYWMQGTKGTYLIV*LLITFCHIP*FLIVY 240
WQ ++G + R + P KR S +L T+++W + G+Y V +L+ I Y
Sbjct: 730 WQTLLGLIMIRQIKTP--WKRFSFYLFCTIMHWYALSWGSYYYVGILLADLDI---TYKY 784

Query: 239 TQTCISMSPW-FW 204
Q ++ PW FW
Sbjct: 785 KQKWLNPRPWVFW 797