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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921765
Clone id YMU001_000153_H06
Library
Length 596
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000153_H06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTACTCACAACGTGTCGATCTTCGTGTGCGCAGTGACGATCTAGTCGCTGGGCGCATCTG
TGCTCTTTTTTCTTCTCAATGCTTTGTGCAAAGTTAACAGGTACCTGAATTAGTATCGCC
ATCTACTGGTGTACTGGGCCTGGTTATTTCTGGTAGCAAATCCAACACACCTGTATCTCC
GAAGAGTAACCCATATCAACACGGGTATCTCCACCATCCATGTCGAATCAACTCGGACAC
ACAGCTCCTCCCAATGAATGTAACCACTCTCATCTGGCACGCCATGTAACATATGGTCTG
AAGTAACATGTGTAAGAGTAATCTCTGTTGGTGGGGTGAGTCCAAATATGATGGAAGAGG
TCAAATCGGTACAATCCACTCACCATTGTACCACCTCTAACTTCCACATCAAAGACTTTT
TCTCAAATGCTCGCAAGTACTACCCCCATGCCAAGCCTGTAAAGCTCATACACTGACAAG
ATGTGGTACCCTAGATGAGGCACATATAAAACATGGGAGGTATACATTCCCCTCCTGCCG
TCTAGAATAGGCTCCATAGCCCCTTCACTATGTACAGGAGCCAATGATCTGTCTCC
■■Homology search results ■■ -
sp_hit_id Q64566
Definition sp|Q64566|AT2C1_RAT Calcium-transporting ATPase type 2C member 1 OS=Rattus norvegicus
Align length 98
Score (bit) 31.6
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921765|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_H06.
         (596 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q64566|AT2C1_RAT Calcium-transporting ATPase type 2C member 1...    32   3.2  
sp|Q80XR2|AT2C1_MOUSE Calcium-transporting ATPase type 2C member...    32   3.2  
sp|Q5R5K5|AT2C1_PONAB Calcium-transporting ATPase type 2C member...    31   4.1  
sp|P98194|AT2C1_HUMAN Calcium-transporting ATPase type 2C member...    31   4.1  

>sp|Q64566|AT2C1_RAT Calcium-transporting ATPase type 2C member 1
           OS=Rattus norvegicus GN=Atp2c1 PE=2 SV=1
          Length = 919

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 24/98 (24%), Positives = 43/98 (43%)
 Frame = -2

Query: 436 LRAFEKKSLMWKLEVVQW*VDCTDLTSSIIFGLTPPTEITLTHVTSDHMLHGVPDESGYI 257
           +R  +K++++ KL +V+  + C ++  S   G     E+T+TH+ +   LH      GY 
Sbjct: 323 MRMVKKRAIVKKLPIVET-LGCCNVICSDKTGTLTKNEMTVTHILTSDGLHAEVTGVGYN 381

Query: 256 HWEELCVRVDSTWMVEIPVLIWVTLRRYRCVGFATRNN 143
            + E+ V  D       P +  +      C     RNN
Sbjct: 382 QFGEVIVDGDVVHGFYNPAVSRIVEAGCVCNDAVIRNN 419


>sp|Q80XR2|AT2C1_MOUSE Calcium-transporting ATPase type 2C member 1
           OS=Mus musculus GN=Atp2c1 PE=2 SV=1
          Length = 918

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 24/98 (24%), Positives = 43/98 (43%)
 Frame = -2

Query: 436 LRAFEKKSLMWKLEVVQW*VDCTDLTSSIIFGLTPPTEITLTHVTSDHMLHGVPDESGYI 257
           +R  +K++++ KL +V+  + C ++  S   G     E+T+TH+ +   LH      GY 
Sbjct: 322 MRMVKKRAIVKKLPIVET-LGCCNVICSDKTGTLTKNEMTVTHILTSDGLHAEVTGVGYN 380

Query: 256 HWEELCVRVDSTWMVEIPVLIWVTLRRYRCVGFATRNN 143
            + E+ V  D       P +  +      C     RNN
Sbjct: 381 QFGEVIVDGDVVHGFYNPAVSRIVEAGCVCNDAVIRNN 418


>sp|Q5R5K5|AT2C1_PONAB Calcium-transporting ATPase type 2C member 1
           OS=Pongo abelii GN=ATP2C1 PE=2 SV=1
          Length = 918

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 24/98 (24%), Positives = 43/98 (43%)
 Frame = -2

Query: 436 LRAFEKKSLMWKLEVVQW*VDCTDLTSSIIFGLTPPTEITLTHVTSDHMLHGVPDESGYI 257
           +R  +K++++ KL +V+  + C ++  S   G     E+T+TH+ +   LH      GY 
Sbjct: 323 MRMVKKRAIVKKLPIVET-LGCCNVICSDKTGTLTKNEMTVTHIFTSDGLHAEVTGVGYN 381

Query: 256 HWEELCVRVDSTWMVEIPVLIWVTLRRYRCVGFATRNN 143
            + E+ V  D       P +  +      C     RNN
Sbjct: 382 QFGEVIVDGDVVHGFYNPAVSRIVEAGCVCNDAVIRNN 419


>sp|P98194|AT2C1_HUMAN Calcium-transporting ATPase type 2C member 1
           OS=Homo sapiens GN=ATP2C1 PE=1 SV=3
          Length = 919

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 24/98 (24%), Positives = 43/98 (43%)
 Frame = -2

Query: 436 LRAFEKKSLMWKLEVVQW*VDCTDLTSSIIFGLTPPTEITLTHVTSDHMLHGVPDESGYI 257
           +R  +K++++ KL +V+  + C ++  S   G     E+T+TH+ +   LH      GY 
Sbjct: 323 MRMVKKRAIVKKLPIVET-LGCCNVICSDKTGTLTKNEMTVTHIFTSDGLHAEVTGVGYN 381

Query: 256 HWEELCVRVDSTWMVEIPVLIWVTLRRYRCVGFATRNN 143
            + E+ V  D       P +  +      C     RNN
Sbjct: 382 QFGEVIVDGDVVHGFYNPAVSRIVEAGCVCNDAVIRNN 419
tr_hit_id Q1M953
Definition tr|Q1M953|Q1M953_RHIL3 Putative inositol-1-monophosphatase OS=Rhizobium leguminosarum bv. viciae (strain 3841)
Align length 74
Score (bit) 35.8
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921765|Adiantum capillus-veneris mRNA, clone:
YMU001_000153_H06.
         (596 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q1M953|Q1M953_RHIL3 Putative inositol-1-monophosphatase OS=Rh...    36   1.9  
tr|B0J8S2|B0J8S2_RHILT Inositol-phosphate phosphatase OS=Rhizobi...    35   2.5  
tr|A4HFF2|A4HFF2_LEIBR MP44, putative OS=Leishmania braziliensis...    35   4.3  
tr|Q8S7S0|Q8S7S0_ORYSJ Putative gag-pol polyprotein (Retrotransp...    34   5.6  
tr|A4I2M1|A4I2M1_LEIIN MP44, putative OS=Leishmania infantum GN=...    34   5.6  
tr|B6HKY1|B6HKY1_PENCH Pc21g16230 protein OS=Penicillium chrysog...    34   5.6  
tr|A0KZ68|A0KZ68_SHESA Major facilitator superfamily MFS_1 OS=Sh...    34   7.3  
tr|B8AZP6|B8AZP6_ORYSI Putative uncharacterized protein OS=Oryza...    34   7.3  
tr|Q2R459|Q2R459_ORYSJ Retrotransposon protein, putative, Ty1-co...    33   9.5  
tr|Q6T453|Q6T453_LEIMA MP44 OS=Leishmania major PE=4 SV=1              33   9.5  
tr|Q4FYT8|Q4FYT8_LEIMA MP44, putative OS=Leishmania major strain...    33   9.5  
tr|Q2HBN3|Q2HBN3_CHAGB Predicted protein OS=Chaetomium globosum ...    33   9.5  

>tr|Q1M953|Q1M953_RHIL3 Putative inositol-1-monophosphatase
           OS=Rhizobium leguminosarum bv. viciae (strain 3841)
           GN=pRL90217 PE=3 SV=1
          Length = 277

 Score = 35.8 bits (81), Expect = 1.9
 Identities = 25/74 (33%), Positives = 41/74 (55%)
 Frame = -1

Query: 596 GDRSLAPVHSEGAMEPILDGRRGMYTSHVLYVPHLGYHILSVYELYRLGMGVVLASI*EK 417
           G+R+  P      ++PI DG     T++   +PH G  I S+ E  RL MGVV  ++ ++
Sbjct: 84  GNRTAGPETPVIYIDPI-DGT----TNYAWGIPHFGMTI-SIVESGRLVMGVVYDAMQDE 137

Query: 416 VFDVEVRGGTMVSG 375
           +F  E+ GG  ++G
Sbjct: 138 LFSAEIGGGAYLNG 151


>tr|B0J8S2|B0J8S2_RHILT Inositol-phosphate phosphatase OS=Rhizobium
           leguminosarum bv. trifolii WSM1325 GN=RlegDRAFT_4542
           PE=3 SV=1
          Length = 277

 Score = 35.4 bits (80), Expect = 2.5
 Identities = 25/74 (33%), Positives = 41/74 (55%)
 Frame = -1

Query: 596 GDRSLAPVHSEGAMEPILDGRRGMYTSHVLYVPHLGYHILSVYELYRLGMGVVLASI*EK 417
           G+R+  P      ++PI DG     T++   +PH G  I S+ E  RL MGVV  ++ ++
Sbjct: 84  GNRTAGPETPIIYIDPI-DGT----TNYAWGIPHFGMTI-SIVESGRLVMGVVYDAMQDE 137

Query: 416 VFDVEVRGGTMVSG 375
           +F  E+ GG  ++G
Sbjct: 138 LFSAEIGGGAYLNG 151


>tr|A4HFF2|A4HFF2_LEIBR MP44, putative OS=Leishmania braziliensis
           GN=LbrM27_V2.0350 PE=4 SV=1
          Length = 429

 Score = 34.7 bits (78), Expect = 4.3
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = -2

Query: 370 TDLTSSIIFGLTPPTEITLTHVTSDHMLHGVPDESGYIHWEELCVRVDSTWMVE 209
           TDLT +    L PP+++ + HV S H+L  VP E  Y   E +   +   W+ E
Sbjct: 249 TDLTHNN--ALFPPSDVLILHVLSTHLLENVPAELIYNVVEPIVADIKRVWVNE 300


>tr|Q8S7S0|Q8S7S0_ORYSJ Putative gag-pol polyprotein
           (Retrotransposon protein, putative, Ty1-copia subclass,
           expressed) OS=Oryza sativa subsp. japonica
           GN=OSJNBa0049K09.15 PE=4 SV=1
          Length = 1109

 Score = 34.3 bits (77), Expect = 5.6
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
 Frame = -1

Query: 596 GDRSLAPVHSEGAMEPILDGRRGMYTSHVLYVPHLGYHILSVYELYRLGMGVVLAS--I* 423
           G+RSLA VH  G ++      + M   +V +VP +  +++S   L R G  +V  S    
Sbjct: 418 GNRSLAAVHGVGTVDLKFTSGKTMQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCV 477

Query: 422 EKVFDVEVRGGTMVSGLYRFDL-----FHHIWTHPTNRDYSYTCYFR 297
              ++  V  G    GL+RF L      H++  H +  D S   + R
Sbjct: 478 VSKYETFVGKGYDSGGLFRFSLNDMCNNHNVVNHISENDESNVWHSR 524


>tr|A4I2M1|A4I2M1_LEIIN MP44, putative OS=Leishmania infantum
           GN=LinJ27.0250 PE=4 SV=1
          Length = 373

 Score = 34.3 bits (77), Expect = 5.6
 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = -2

Query: 370 TDLTSSIIFGLTPPTEITLTHVTSDHMLHGVPDESGYIHWEELCVRVDSTWMVE---IPV 200
           TDLT +    L PP+++ + HV S H+L  +P E  Y   E +   +   W+ E   +P 
Sbjct: 193 TDLTHNN--ALFPPSDVLILHVLSTHLLENLPAELIYNVVEPIVADIKRVWVNEPMSLPS 250

Query: 199 LIWVTLRRYRCVGFATRNNQAQYTSR 122
            + +T R    +       + +YT++
Sbjct: 251 QLRLTPRTVGALSLNAVPVEPRYTAK 276


>tr|B6HKY1|B6HKY1_PENCH Pc21g16230 protein OS=Penicillium
           chrysogenum Wisconsin 54-1255 GN=Pc21g16230 PE=4 SV=1
          Length = 1236

 Score = 34.3 bits (77), Expect = 5.6
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 370 YNPLTIVPPLTSTSKTFSQMLASTTPMPSL*SSYTDKMWYP 492
           +NP T+VP  T  ++T S   A  TP+P++  SY D    P
Sbjct: 49  HNPFTLVPEETDLTETTSPQNAGITPLPTVAHSYVDTFSSP 89


>tr|A0KZ68|A0KZ68_SHESA Major facilitator superfamily MFS_1
           OS=Shewanella sp. (strain ANA-3) GN=Shewana3_2860 PE=4
           SV=1
          Length = 398

 Score = 33.9 bits (76), Expect = 7.3
 Identities = 22/64 (34%), Positives = 33/64 (51%)
 Frame = -2

Query: 268 SGYIHWEELCVRVDSTWMVEIPVLIWVTLRRYRCVGFATRNNQAQYTSRWRY*FRYLLTL 89
           +G  HW         TW+  I +L+W+  R++  +   T + QA+Y S WRY   +LL L
Sbjct: 167 AGLGHW---------TWLALIAILLWIVSRKHLALPSHT-DKQAEY-SFWRYRRSWLLAL 215

Query: 88  HKAL 77
             AL
Sbjct: 216 FFAL 219


>tr|B8AZP6|B8AZP6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_19003 PE=4 SV=1
          Length = 422

 Score = 33.9 bits (76), Expect = 7.3
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 12/110 (10%)
 Frame = -1

Query: 596 GDRSLAPVHSEGAMEPILDGRRGMYTSHVLYVPHLGYHILSVYELYRLGMGVVLAS--I* 423
           G+RSLA VH  G ++      + +   +V +VP +  +++S   L R G  +V  S    
Sbjct: 198 GNRSLAAVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCV 257

Query: 422 EKVFDVEVRGGTMVSGLYRFDL-----FHHIWTHPTNRD-----YSYTCY 303
              +   VR G    GL+RF L      H+   H ++ D     +S  CY
Sbjct: 258 VSKYGTFVRKGCDSGGLFRFSLDDMCNNHNFVNHISDNDESNVWHSRLCY 307


>tr|Q2R459|Q2R459_ORYSJ Retrotransposon protein, putative, Ty1-copia
           subclass OS=Oryza sativa subsp. japonica
           GN=LOC_Os11g29610 PE=4 SV=1
          Length = 1370

 Score = 33.5 bits (75), Expect = 9.5
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
 Frame = -1

Query: 596 GDRSLAPVHSEGAMEPILDGRRGMYTSHVLYVPHLGYHILSVYELYRLGMGVVLAS---I 426
           G+RSLA VH  G ++     R+ +   +V +VP +  +++S   L R G  +V  S   I
Sbjct: 399 GNRSLAAVHGVGTVDLKFTSRKIVQLKNVQHVPSIKKNLVSGSLLCRDGFRLVFESNKCI 458

Query: 425 *EKVFDVEVRGGTMVSGLYRF---DLFHHIWTHPTNRD 321
             K +   +  G    GL+RF   D+ + +  H +N D
Sbjct: 459 VSK-YGTFIAKGYDSGGLFRFSLDDMCNKVVNHVSNDD 495


>tr|Q6T453|Q6T453_LEIMA MP44 OS=Leishmania major PE=4 SV=1
          Length = 429

 Score = 33.5 bits (75), Expect = 9.5
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -2

Query: 370 TDLTSSIIFGLTPPTEITLTHVTSDHMLHGVPDESGYIHWEELCVRVDSTWMVE 209
           TDLT +    L PP+++ + HV S H+L  +P E  Y   E +   +   W+ E
Sbjct: 249 TDLTHNN--ALFPPSDVLILHVLSTHLLENLPAELIYNVVEPIVADIKRVWVNE 300