BP921774 |
Clone id |
YMU001_000154_A05 |
Library |
YMU01 |
Length |
442 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000154_A05. |
Accession |
BP921774 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GAACAGATTTGTTAAATAGTCAAAATGTTGGATTGTCAAAAGATACGCTGGGACTGGTGG ACTTCAATGACCCTAAAAATCTTAAGCTGTTTGACACGAACACTGGCAAGGAGCTGGAAC AAGTAATTCACCATGATGTACCCATCATGGATGTTGATATGAACCAACAAGGAACAATAG CTGACAGAATGCTGATATTCATCGATAGCAACAATGATCTTTATATTGCTTGCATTGTGA AACCATGCATAATCAAGTTGGCTTCTTTGGCAACAAAGGCTTTGTGGAGCAGTAGTGCAC ATATTGTTGCAGTGATGGTGGATCAAGACCTGGTTATATGGTTATATCCACAGGCAGCAT TCATTGATGAGGATCTTCTGAGTATATTACAAGCGAAGAAGGAATGGTATGCAAGTGCTG AATGGTCTGACTAGTGACATCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q66HB3 |
Definition |
sp|Q66HB3|IFT80_RAT Intraflagellar transport protein 80 homolog OS=Rattus norvegicus |
Align length |
132 |
Score (bit) |
91.7 |
E-value |
1.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q22BU7 |
Definition |
tr|Q22BU7|Q22BU7_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210 |
Align length |
133 |
Score (bit) |
105.0 |
E-value |
9.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921774|Adiantum capillus-veneris mRNA, clone: YMU001_000154_A05. (442 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q22BU7|Q22BU7_TETTH Putative uncharacterized protein OS=Tetra... 105 9e-22 tr|A0DLY4|A0DLY4_PARTE Chromosome undetermined scaffold_56, whol... 101 2e-20 tr|A8IXE2|A8IXE2_CHLRE Intraflagellar transport particle protein... 100 3e-20 tr|A5Z0S9|A5Z0S9_CHLRE Intraflagellar transport protein 80 OS=Ch... 100 3e-20 tr|A9SLK5|A9SLK5_PHYPA Intraflagellar transport protein 80 (Frag... 100 5e-20 tr|A7S6M0|A7S6M0_NEMVE Predicted protein OS=Nematostella vectens... 96 1e-18 tr|Q4SPN7|Q4SPN7_TETNG Chromosome 16 SCAF14537, whole genome sho... 91 2e-17 tr|A5PK09|A5PK09_BOVIN IFT80 protein OS=Bos taurus GN=IFT80 PE=2... 91 3e-17 tr|B3RIZ0|B3RIZ0_TRIAD Putative uncharacterized protein OS=Trich... 90 6e-17 tr|B4E0K1|B4E0K1_HUMAN cDNA FLJ52072, highly similar to Intrafla... 88 2e-16 tr|Q5PRA9|Q5PRA9_DANRE Intraflagellar transport 80 homolog (Chla... 87 4e-16 tr|Q4DYL5|Q4DYL5_TRYCR Putative uncharacterized protein OS=Trypa... 83 8e-15 tr|A4HY55|A4HY55_LEIIN Putative uncharacterized protein OS=Leish... 82 2e-14 tr|A4H9Z1|A4H9Z1_LEIBR Putative uncharacterized protein OS=Leish... 80 5e-14 tr|Q28I56|Q28I56_XENTR WD repeat domain 56 (Intraflagellar trans... 80 7e-14 tr|Q4QDI8|Q4QDI8_LEIMA Putative uncharacterized protein OS=Leish... 80 7e-14 tr|B6L2P4|B6L2P4_BRAFL Putative uncharacterized protein OS=Branc... 79 1e-13 tr|A8PT45|A8PT45_BRUMA RIKEN cDNA 4921524P20, putative OS=Brugia... 73 8e-12 tr|Q388A9|Q388A9_9TRYP Putative uncharacterized protein OS=Trypa... 72 2e-11 tr|A9V5N6|A9V5N6_MONBE Predicted protein OS=Monosiga brevicollis... 71 2e-11 tr|B7P7E8|B7P7E8_IXOSC G-beta-repeat protein, putative (Fragment... 70 7e-11 tr|A8XIE0|A8XIE0_CAEBR CBR-CHE-2 protein OS=Caenorhabditis brigg... 62 1e-08 tr|Q9XZP7|Q9XZP7_CAEEL CHE-2 protein (Abnormal chemotaxis protei... 60 5e-08 tr|Q16R46|Q16R46_AEDAE Intraflagellar transport 80, putative (Fr... 59 9e-08 tr|Q4DCC3|Q4DCC3_TRYCR Putative uncharacterized protein (Fragmen... 59 2e-07 tr|B0X9L8|B0X9L8_CULQU Oseg5 OS=Culex quinquefasciatus GN=CpipJ_... 58 3e-07 tr|B0W0C2|B0W0C2_CULQU Intraflagellar transport 80 OS=Culex quin... 58 3e-07 tr|Q7Q0S2|Q7Q0S2_ANOGA AGAP010190-PA (Fragment) OS=Anopheles gam... 56 8e-07 tr|B4P725|B4P725_DROYA GE13019 OS=Drosophila yakuba GN=GE13019 P... 48 2e-04 tr|B3NKY1|B3NKY1_DROER GG21545 OS=Drosophila erecta GN=GG21545 P... 48 3e-04
>tr|Q22BU7|Q22BU7_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210 GN=TTHERM_01084200 PE=4 SV=2 Length = 774
Score = 105 bits (263), Expect = 9e-22 Identities = 48/133 (36%), Positives = 80/133 (60%) Frame = +3
Query: 6 DLLNSQNVGLSKDTLGLVDFNDPKNLKLFDTNTGKELEQVIHHDVPIMDVDMNQQGTIAD 185 +LLNSQ + +S+D L +VD PKN+ +D +G +L + H + I+++ +N +D Sbjct: 432 ELLNSQKLSISQDVLAIVDGIKPKNISFYDIASGNKLNFTLDHSLEILEIHLNNSDQASD 491
Query: 186 RMLIFIDSNNDLYIACIVKPCIIKLASLATKALWSSSAHIVAVMVDQDLVIWLYPQAAFI 365 R + FIDSN D Y++ + K +IKL S+A LW+ I++ + D L W YP A ++ Sbjct: 492 RKIAFIDSNRDFYLSPVHKRDLIKLTSMADSFLWNDKHDILSCIADGRLQTWYYPNAIYV 551
Query: 366 DEDLLSILQAKKE 404 D+DL+ + + KE Sbjct: 552 DKDLMDLCKNTKE 564
>tr|A0DLY4|A0DLY4_PARTE Chromosome undetermined scaffold_56, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00018269001 PE=4 SV=1 Length = 751
Score = 101 bits (252), Expect = 2e-20 Identities = 45/131 (34%), Positives = 78/131 (59%) Frame = +3
Query: 12 LNSQNVGLSKDTLGLVDFNDPKNLKLFDTNTGKELEQVIHHDVPIMDVDMNQQGTIADRM 191 L+ + + +S D L LVD + K +K ++ N+GK L + H + I+++++NQ I +R Sbjct: 410 LSHKKIAISNDLLALVDGGNNKVVKFYEMNSGKALNFTVEHSLEILEINLNQTEMIGERK 469
Query: 192 LIFIDSNNDLYIACIVKPCIIKLASLATKALWSSSAHIVAVMVDQDLVIWLYPQAAFIDE 371 L F+D N DL+I + K I+KLA++ LW+ ++ + DQ V+W YP + ++D Sbjct: 470 LAFVDQNRDLHITPVHKKDIVKLAAMTDSFLWNEKFDMLCAISDQRFVVWYYPTSVYVDR 529
Query: 372 DLLSILQAKKE 404 DLL ++ KE Sbjct: 530 DLLEQVKVSKE 540
>tr|A8IXE2|A8IXE2_CHLRE Intraflagellar transport particle protein 80 OS=Chlamydomonas reinhardtii GN=IFT80 PE=4 SV=1 Length = 747
Score = 100 bits (250), Expect = 3e-20 Identities = 48/128 (37%), Positives = 79/128 (61%), Gaps = 1/128 (0%) Frame = +3
Query: 3 TDLLNSQNVGLSKDTLGLVDFN-DPKNLKLFDTNTGKELEQVIHHDVPIMDVDMNQQGTI 179 T+LLN+Q + LS DT+ ++D ++ FDT G+ + + H + + ++ ++Q GTI Sbjct: 396 TELLNAQMITLSNDTIAVLDQQASGTTVRFFDTAQGRPVGEPWQHTLEVKEIALSQAGTI 455
Query: 180 ADRMLIFIDSNNDLYIACIVKPCIIKLASLATKALWSSSAHIVAVMVDQDLVIWLYPQAA 359 DR LI ID N DLY+ ++K + KLA++ A W S +++ MVDQ L +W YP Sbjct: 456 NDRQLIVIDRNRDLYLLPVMKRHVAKLAAMCDSARWHDSTAMLSAMVDQRLCVWYYPSEV 515
Query: 360 FIDEDLLS 383 ++D+DLL+ Sbjct: 516 YVDKDLLA 523
>tr|A5Z0S9|A5Z0S9_CHLRE Intraflagellar transport protein 80 OS=Chlamydomonas reinhardtii PE=2 SV=1 Length = 765
Score = 100 bits (250), Expect = 3e-20 Identities = 48/128 (37%), Positives = 79/128 (61%), Gaps = 1/128 (0%) Frame = +3
Query: 3 TDLLNSQNVGLSKDTLGLVDFN-DPKNLKLFDTNTGKELEQVIHHDVPIMDVDMNQQGTI 179 T+LLN+Q + LS DT+ ++D ++ FDT G+ + + H + + ++ ++Q GTI Sbjct: 414 TELLNAQMITLSNDTIAVLDQQASGTTVRFFDTAQGRPVGEPWQHTLEVKEIALSQAGTI 473
Query: 180 ADRMLIFIDSNNDLYIACIVKPCIIKLASLATKALWSSSAHIVAVMVDQDLVIWLYPQAA 359 DR LI ID N DLY+ ++K + KLA++ A W S +++ MVDQ L +W YP Sbjct: 474 NDRQLIVIDRNRDLYLLPVMKRHVAKLAAMCDSARWHDSTAMLSAMVDQRLCVWYYPSEV 533
Query: 360 FIDEDLLS 383 ++D+DLL+ Sbjct: 534 YVDKDLLA 541
>tr|A9SLK5|A9SLK5_PHYPA Intraflagellar transport protein 80 (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_131844 PE=4 SV=1 Length = 658
Score = 100 bits (248), Expect = 5e-20 Identities = 46/139 (33%), Positives = 81/139 (58%), Gaps = 5/139 (3%) Frame = +3
Query: 3 TDLLNSQNVGLSKDTLGLVDFNDPKNLKLFDTNTGKELEQVIHHDVPIMDVDMNQQGTIA 182 T+ N +NV LS + +++ ND K ++ D NTGK + +V+ H + ++++ +NQ G +A Sbjct: 327 TESFNQRNVSLSNNVFAVIEHNDKKVVRFLDVNTGKLVGEVMRHSLDVVEIALNQLGILA 386
Query: 183 DRMLIFIDSNNDLY-----IACIVKPCIIKLASLATKALWSSSAHIVAVMVDQDLVIWLY 347 D+ L+ IDSN Y + + + KLAS+ +W+ A I+ + D+ LV+W Y Sbjct: 387 DQKLVLIDSNRLTYTFRTRCVSVQRLALFKLASMVESIMWNEVADILVAVADRRLVVWYY 446
Query: 348 PQAAFIDEDLLSILQAKKE 404 P A +D+DLL ++ K+ Sbjct: 447 PHAPTVDKDLLQYVKLTKD 465
>tr|A7S6M0|A7S6M0_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g167102 PE=4 SV=1 Length = 771
Score = 95.5 bits (236), Expect = 1e-18 Identities = 47/132 (35%), Positives = 78/132 (59%), Gaps = 6/132 (4%) Frame = +3
Query: 3 TDLLNSQNVGLSKDTLGLVDFNDPKNLKLFDTNTGKELE--QVIHHDVPIMDVDMNQQGT 176 TD+LN Q V LS DTL + D D K + LF+ ++G+ + + + H + +M++ +NQ G Sbjct: 414 TDVLNEQTVSLSNDTLAIKDRKDEKVIYLFEASSGRAVGSGEPLTHTMEVMELALNQCGP 473
Query: 177 IADRMLIFIDSNNDLYIACI--VKPC--IIKLASLATKALWSSSAHIVAVMVDQDLVIWL 344 DR L ID N DLY+ + + P ++KL ++ T W+ S +++A + D +W Sbjct: 474 TGDRQLAIIDKNRDLYLTPVKHIGPAAKLVKLGTMVTSMAWNDSTNMLAALQDGRFTVWY 533
Query: 345 YPQAAFIDEDLL 380 YP A F+D+D+L Sbjct: 534 YPTAVFVDQDIL 545
>tr|Q4SPN7|Q4SPN7_TETNG Chromosome 16 SCAF14537, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00014743001 PE=4 SV=1 Length = 566
Score = 91.3 bits (225), Expect = 2e-17 Identities = 45/131 (34%), Positives = 78/131 (59%), Gaps = 6/131 (4%) Frame = +3
Query: 6 DLLNSQNVGLSKDTLGLVDFNDPKNLKLFDTNTGKELE--QVIHHDVPIMDVDMNQQGTI 179 D++N+Q V LS DT+ + D ++ K + +FD TGK L + + H + ++++ ++Q G Sbjct: 211 DIINAQGVSLSNDTIAIRDKSEEKVILVFDALTGKPLGDGRSLTHKLEVLEIALDQCGPS 270
Query: 180 ADRMLIFIDSNNDLYIACI----VKPCIIKLASLATKALWSSSAHIVAVMVDQDLVIWLY 347 A+R + FID N DLY+A + +P I K+ S+ W+ +A+I+ + D L +W Y Sbjct: 271 AERKIAFIDKNRDLYLAFVRHLSQEPKICKIGSMVHGVAWNDAANILCGIQDNQLTVWYY 330
Query: 348 PQAAFIDEDLL 380 P F D+DL+ Sbjct: 331 PSVVFTDKDLI 341
>tr|A5PK09|A5PK09_BOVIN IFT80 protein OS=Bos taurus GN=IFT80 PE=2 SV=1 Length = 777
Score = 90.9 bits (224), Expect = 3e-17 Identities = 45/132 (34%), Positives = 75/132 (56%), Gaps = 6/132 (4%) Frame = +3
Query: 3 TDLLNSQNVGLSKDTLGLVDFNDPKNLKLFDTNTGKEL--EQVIHHDVPIMDVDMNQQGT 176 TD+LN+Q V LS DT+ + D D K + LF+ +TGK + + + H ++++ ++Q+G Sbjct: 414 TDILNAQTVSLSNDTIAIKDKADEKIIFLFEASTGKPMGDGKFLSHKNEVLEIALDQKGL 473
Query: 177 IADRMLIFIDSNNDLYIACIVK----PCIIKLASLATKALWSSSAHIVAVMVDQDLVIWL 344 DR + FID N DLYI + + IIKL ++ WS + +I+ + D +W Sbjct: 474 TNDRKIAFIDKNRDLYITSVKRFGKEEQIIKLGTMVHTLAWSDTCNILCGLQDTRFTVWY 533
Query: 345 YPQAAFIDEDLL 380 YP ++D D+L Sbjct: 534 YPNTVYVDRDIL 545
>tr|B3RIZ0|B3RIZ0_TRIAD Putative uncharacterized protein OS=Trichoplax adhaerens GN=TRIADDRAFT_49567 PE=4 SV=1 Length = 773
Score = 89.7 bits (221), Expect = 6e-17 Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 4/137 (2%) Frame = +3
Query: 3 TDLLNSQNVGLSKDTLGLVDFNDPKNLKLFDTNTGKELE--QVIHHDVPIMDVDMNQQGT 176 TDLLN V LS DTL + D D + + LF+T +GK + + I H + I++ ++Q G Sbjct: 419 TDLLNKHTVSLSNDTLAVRDVKDERLIYLFETASGKAVGSGKPIQHQLEIIETCLDQCGP 478
Query: 177 IADRMLIFIDSNNDLYIACIVKP--CIIKLASLATKALWSSSAHIVAVMVDQDLVIWLYP 350 +R L ID N D+Y+A + + IKL ++ + W+ + +++A + D IW YP Sbjct: 479 AMERQLAIIDKNRDVYLAKVRRSEAAFIKLGTMVSSLAWNDACNMLAAIQDNHFTIWYYP 538
Query: 351 QAAFIDEDLLSILQAKK 401 + D D+L + Q +K Sbjct: 539 SVVYADRDILHLTQYEK 555
>tr|B4E0K1|B4E0K1_HUMAN cDNA FLJ52072, highly similar to Intraflagellar transport 80 homolog OS=Homo sapiens PE=2 SV=1 Length = 777
Score = 88.2 bits (217), Expect = 2e-16 Identities = 45/132 (34%), Positives = 75/132 (56%), Gaps = 6/132 (4%) Frame = +3
Query: 3 TDLLNSQNVGLSKDTLGLVDFNDPKNLKLFDTNTGKEL--EQVIHHDVPIMDVDMNQQGT 176 TD+LN+Q V LS DT+ + D D K + LF+ +TGK L + + H I+++ ++Q+G Sbjct: 414 TDILNAQTVSLSNDTIAIRDKADEKIIFLFEASTGKPLGDGKFLSHKNEILEIALDQKGL 473
Query: 177 IADRMLIFIDSNNDLYIACIVK----PCIIKLASLATKALWSSSAHIVAVMVDQDLVIWL 344 DR + FID N DL I + + IIKL ++ W+ + +I+ + D ++W Sbjct: 474 TNDRKIAFIDKNRDLCITSVKRFGKEEQIIKLGTMVHTLAWNDTCNILCGLQDTRFIVWY 533
Query: 345 YPQAAFIDEDLL 380 YP ++D D+L Sbjct: 534 YPNTVYVDRDIL 545
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