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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921787
Clone id YMU001_000154_B07
Library
Length 339
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000154_B07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTTTTTTTTTTTTTTAGCAGAGAACAACGACAATCTTCTAGTAGTGACGCTTTGTT
GATGTATTACAACAAGTCCGGGCCACCAAGCTAAGGTATGCAGATGATGGGCTGTCCCAA
CAATCATGGCAACGTTGAGGTTAATAAAGGTGCGATCAAGATATGCATATGGAGCCCTTC
CTCTCTCCACACTAGTGGTATTATTACACCCCTTTCCCATTCTCGCACTTCCTTCTGAGC
TTATTAGATTTCCACACCGTCCTTCCCCTGTTTATTTCAGTCTGGCAGCTTGCCAGCCTT
AATAAATGGCAAAATTCTCGCTCACCTGAAATGGCATCT
■■Homology search results ■■ -
sp_hit_id Q8SR75
Definition sp|Q8SR75|RPB2_ENCCU DNA-directed RNA polymerase II subunit RPB2 OS=Encephalitozoon cuniculi
Align length 45
Score (bit) 33.1
E-value 0.44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921787|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_B07.
         (320 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8SR75|RPB2_ENCCU DNA-directed RNA polymerase II subunit RPB2...    33   0.44 
sp|Q9M1V5|HFA7B_ARATH Heat stress transcription factor A-7b OS=A...    32   1.3  
sp|Q42712|FATA_CORSA Oleoyl-acyl carrier protein thioesterase, c...    32   1.3  
sp|Q6JHU7|P3H2_CHICK Prolyl 3-hydroxylase 2 OS=Gallus gallus GN=...    29   6.3  
sp|P15636|API_ACHLY Protease 1 OS=Achromobacter lyticus PE=1 SV=1      29   6.3  
sp|P14908|MTF1_YEAST Mitochondrial replication protein MTF1 OS=S...    29   8.2  
sp|Q9Y829|MTF1_SACDO Mitochondrial replication protein MTF1 OS=S...    29   8.2  

>sp|Q8SR75|RPB2_ENCCU DNA-directed RNA polymerase II subunit RPB2
            OS=Encephalitozoon cuniculi GN=RPB2 PE=3 SV=1
          Length = 1141

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -3

Query: 237  CGNLISSEGSARMGKGCNNTTSVERGRAPYAY--LDRTFINLNVA 109
            CG L          KGCNNTT+V     PYA+  L +  + +N+A
Sbjct: 1090 CGLLAMGGSKVNECKGCNNTTNVSMVEIPYAFKLLIQELMGMNIA 1134


>sp|Q9M1V5|HFA7B_ARATH Heat stress transcription factor A-7b
           OS=Arabidopsis thaliana GN=HSFA7B PE=2 SV=1
          Length = 282

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 82  QMMGCPNNHGNVEVNKGAIKICIWSPSSLHTSGIITPLSHSRTSF 216
           +M+G PN +  V  N+G I   +W P S   S  I PL     +F
Sbjct: 35  EMVGDPNTNHIVSWNRGGISFVVWDPHSF--SATILPLYFKHNNF 77


>sp|Q42712|FATA_CORSA Oleoyl-acyl carrier protein thioesterase,
           chloroplastic (Fragment) OS=Coriandrum sativum GN=FATA
           PE=2 SV=1
          Length = 369

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 298 EFCHLLRLASCQTEINRGRTVWKSNKLRR 212
           +F H LR++    EINRGRT W+    +R
Sbjct: 341 KFLHFLRVSGQGLEINRGRTEWRKKSEKR 369


>sp|Q6JHU7|P3H2_CHICK Prolyl 3-hydroxylase 2 OS=Gallus gallus
           GN=LEPREL1 PE=2 SV=1
          Length = 694

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
 Frame = -3

Query: 240 RCGNLISSE----GSARMGKGCNNTTSVERGRAPYAYLDRTFINLNVAMIVGTAHHLHTL 73
           R G L S E    G+A   +      S  + R PY+YL R +I LN       A H   +
Sbjct: 105 RAGCLRSCEEPRLGAASRHRAAEEVRSDFQRRVPYSYLQRAYIQLNKLEEAANAAHTFFM 164

Query: 72  A 70
           A
Sbjct: 165 A 165


>sp|P15636|API_ACHLY Protease 1 OS=Achromobacter lyticus PE=1 SV=1
          Length = 653

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
 Frame = -3

Query: 186 NNTTSVERGRAPYAYLDRTFINLNVAMIVGTAHHLHTLAW------WPGLVVIHQQSVTT 25
           + T S    +A YA  D T + LN A     A +L    W      +PG + IH  +V  
Sbjct: 302 SQTQSGSTVKATYATSDFTLLELNNA--ANPAFNLFWAGWDRRDQNYPGAIAIHHPNVAE 359

Query: 24  RRLS 13
           +R+S
Sbjct: 360 KRIS 363


>sp|P14908|MTF1_YEAST Mitochondrial replication protein MTF1
           OS=Saccharomyces cerevisiae GN=MTF1 PE=1 SV=4
          Length = 341

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
 Frame = +1

Query: 10  QRQSSSSDALLMYYNKSGPPS*G--MQMMGCPNNHGNVEVNKGAIKICIWSPSSLHTSGI 183
           Q     +D  L   N +G  S G  MQ + C  N  N     G +K+ +W PS+     +
Sbjct: 123 QSSDHINDKFLTVANVTGEGSEGLIMQWLSCIGNK-NWLYRFGKVKMLLWMPSTTARKLL 181

Query: 184 ITPLSHSRT 210
             P  HSR+
Sbjct: 182 ARPGMHSRS 190


>sp|Q9Y829|MTF1_SACDO Mitochondrial replication protein MTF1
           OS=Saccharomyces douglasii GN=MTF1 PE=3 SV=3
          Length = 341

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = +1

Query: 28  SDALLMYYNKSGPPS*G--MQMMGCPNNHGNVEVNKGAIKICIWSPSSLHTSGIITPLSH 201
           +D  L   N +G  S G  MQ + C  N  N     G +K+ +W PS+     +  P +H
Sbjct: 129 NDKFLTVANVTGEGSEGLIMQWLSCIGNK-NWLYRFGKVKMLLWMPSTTAKKLLARPSTH 187

Query: 202 SRT 210
           +R+
Sbjct: 188 ARS 190
tr_hit_id Q9ZTF7
Definition tr|Q9ZTF7|Q9ZTF7_CUPHO Thioesterase FatA1 OS=Cuphea hookeriana
Align length 31
Score (bit) 37.4
E-value 0.38
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921787|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_B07.
         (320 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9ZTF7|Q9ZTF7_CUPHO Thioesterase FatA1 OS=Cuphea hookeriana P...    37   0.38 
tr|A9UFC5|A9UFC5_9ROSI Acyl-ACP thioesterase OS=Jatropha curcas ...    37   0.38 
tr|Q8L6B1|Q8L6B1_WHEAT Acyl-[acyl-carrier protein] thioesterase ...    37   0.49 
tr|O04793|O04793_9ROSI Acyl-ACP thioesterase OS=Garcinia mangost...    37   0.49 
tr|Q0J0M2|Q0J0M2_ORYSJ Os09g0505300 protein (Fragment) OS=Oryza ...    36   0.84 
tr|O04792|O04792_9ROSI Acyl-ACP thioesterase OS=Garcinia mangost...    36   0.84 
tr|B8BDB0|B8BDB0_ORYSI Putative uncharacterized protein OS=Oryza...    36   0.84 
tr|A3C0E8|A3C0E8_ORYSJ Putative uncharacterized protein OS=Oryza...    36   0.84 
tr|B8LS31|B8LS31_PICSI Putative uncharacterized protein OS=Picea...    36   1.1  
tr|A9XK92|A9XK92_RICCO Acyl-ACP thioesterase FatA OS=Ricinus com...    36   1.1  
tr|Q8SMI2|Q8SMI2_PERFR Acyl-ACP thioesterase OS=Perilla frutesce...    35   1.4  
tr|B6TSK6|B6TSK6_MAIZE Oleoyl-acyl carrier protein thioesterase ...    35   1.4  
tr|Q43745|Q43745_BRANA Oleoyl-[acyl-carrier protein] hydrolase (...    35   1.9  
tr|Q43718|Q43718_BRANA Acyl-ACP thioesterase (Oleoyl-[acyl-carri...    35   1.9  
tr|Q94IN9|Q94IN9_BRAJU Oleoyl hydrolase OS=Brassica juncea GN=fa...    35   2.4  
tr|A9U2A8|A9U2A8_PHYPA Predicted protein (Fragment) OS=Physcomit...    35   2.4  
tr|A9SUP0|A9SUP0_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.4  
tr|Q9SV64|Q9SV64_ARATH At4g13050 OS=Arabidopsis thaliana GN=AT4g...    34   3.2  
tr|Q9FT16|Q9FT16_BRAJU Acyl-ACP thioesterase (Fragment) OS=Brass...    34   4.1  
tr|A7R1M7|A7R1M7_VITVI Chromosome undetermined scaffold_365, who...    34   4.1  
tr|A7QZF9|A7QZF9_VITVI Chromosome undetermined scaffold_274, who...    34   4.1  
tr|Q8S9G4|Q8S9G4_9ASPA Acyl-ACP thioesterase OS=Iris tectorum PE...    33   5.4  
tr|B6TZM6|B6TZM6_MAIZE Oleoyl-acyl carrier protein thioesterase ...    33   5.4  
tr|B4F7Y3|B4F7Y3_MAIZE Putative uncharacterized protein OS=Zea m...    33   5.4  
tr|B3LCU3|B3LCU3_PLAKH SPX d0main containing protein OS=Plasmodi...    33   5.4  
tr|Q9FQX9|Q9FQX9_IRIGE Acyl-ACP thioesterase OS=Iris germanica G...    33   7.1  
tr|O49947|O49947_SOLTU Acyl carrier protein thioesterase (Fragme...    33   7.1  
tr|B8ADP0|B8ADP0_ORYSI Putative uncharacterized protein OS=Oryza...    33   9.2  
tr|A2ZQ58|A2ZQ58_ORYSJ Putative uncharacterized protein OS=Oryza...    33   9.2  
tr|A2QU20|A2QU20_ASPNC Contig An09c0100, complete genome OS=Aspe...    33   9.2  

>tr|Q9ZTF7|Q9ZTF7_CUPHO Thioesterase FatA1 OS=Cuphea hookeriana PE=2
           SV=1
          Length = 376

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = -2

Query: 307 GEREFCHLLRLASCQTEINRGRTVWKSNKLR 215
           G R+F HLLRL+    EINRGRT W+    +
Sbjct: 346 GSRQFLHLLRLSPDGLEINRGRTEWRKKSTK 376


>tr|A9UFC5|A9UFC5_9ROSI Acyl-ACP thioesterase OS=Jatropha curcas
           GN=FATA PE=2 SV=1
          Length = 368

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
 Frame = -2

Query: 316 AISGE---REFCHLLRLASCQTEINRGRTVWKSNKLR 215
           AI+GE   R F HLLR +S   EINRGRT W+    R
Sbjct: 332 AIAGEQDSRNFLHLLRFSSDGLEINRGRTEWRKKPSR 368


>tr|Q8L6B1|Q8L6B1_WHEAT Acyl-[acyl-carrier protein] thioesterase
           OS=Triticum aestivum GN=fatA PE=2 SV=1
          Length = 289

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = -2

Query: 304 EREFCHLLRLASCQTEINRGRTVWK 230
           +R+F H LR A    EINRGRTVW+
Sbjct: 261 QRQFLHCLRFAGAGDEINRGRTVWR 285


>tr|O04793|O04793_9ROSI Acyl-ACP thioesterase OS=Garcinia mangostana
           GN=FatA2 PE=2 SV=1
          Length = 355

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = -2

Query: 295 FCHLLRLASCQTEINRGRTVWK 230
           F HLLRL+S  +EINRGRTVW+
Sbjct: 329 FLHLLRLSSDGSEINRGRTVWR 350


>tr|Q0J0M2|Q0J0M2_ORYSJ Os09g0505300 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os09g0505300 PE=4 SV=1
          Length = 276

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = -2

Query: 304 EREFCHLLRLASCQTEINRGRTVWK 230
           +R+F H LR A    EINRGRTVW+
Sbjct: 248 QRQFLHCLRFAGNGNEINRGRTVWR 272


>tr|O04792|O04792_9ROSI Acyl-ACP thioesterase OS=Garcinia mangostana
           GN=FatA1 PE=2 SV=1
          Length = 352

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 17/31 (54%), Positives = 19/31 (61%)
 Frame = -2

Query: 307 GEREFCHLLRLASCQTEINRGRTVWKSNKLR 215
           G R F HLLRL+    EINRGRT W+    R
Sbjct: 322 GCRNFLHLLRLSGNGLEINRGRTEWRKKPTR 352


>tr|B8BDB0|B8BDB0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_31951 PE=4 SV=1
          Length = 353

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = -2

Query: 304 EREFCHLLRLASCQTEINRGRTVWK 230
           +R+F H LR A    EINRGRTVW+
Sbjct: 325 QRQFLHCLRFAGNGNEINRGRTVWR 349


>tr|A3C0E8|A3C0E8_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_028770 PE=4 SV=1
          Length = 289

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = -2

Query: 304 EREFCHLLRLASCQTEINRGRTVWK 230
           +R+F H LR A    EINRGRTVW+
Sbjct: 261 QRQFLHCLRFAGNGNEINRGRTVWR 285


>tr|B8LS31|B8LS31_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 386

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 16/28 (57%), Positives = 18/28 (64%)
 Frame = -2

Query: 298 EFCHLLRLASCQTEINRGRTVWKSNKLR 215
           EF H+LRLA    EINRGRT W+    R
Sbjct: 359 EFLHMLRLAESGFEINRGRTEWRRKPAR 386


>tr|A9XK92|A9XK92_RICCO Acyl-ACP thioesterase FatA OS=Ricinus
           communis GN=FATA1 PE=2 SV=1
          Length = 371

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = -2

Query: 301 REFCHLLRLASCQTEINRGRTVWKSNKLR 215
           R F HLLRL+    EINRGRT W+    R
Sbjct: 343 RNFLHLLRLSGDGLEINRGRTEWRKKSAR 371