BP921791
Clone id YMU001_000154_B11
Library
Length 474
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000154_B11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGGATGGTGTAGCATGGCACAGTAATATGAGGACTTGGAGCTATGTCAATGTGGCATGCC
ACTCTAGGGCAAAGTATATTCACCTGATTAAAGAGTAAAGGGTTATCATTGCACAATCCG
TTAAGTGGTCATGCATCATCAAAATTTGAAAGTTATTATCATATAGTGCTGTTTCTTGGC
CAATAGCCTCACAGTGATCTGGCCTGTACATCATGGTTCAAGTGAGTTGGCATTAGTTTG
GCTTTAAAGTCGCACAGCGTAAGGGCGTCTGTAGTTCTGGCTAAGGAACAAAAGGCATGT
ATTTATCAATGTCTGGTGGAGAAGTGTGCCCGCCTTATTGGAATTATTGTGCTGTGAAGC
TAGTTGTGCATTTACTTGTTGCAACGTGCTAATAAATGCCATGTTCTGCTTATCTTACGT
ATGGCTATGCTCCTGTGTTTCATTGGATATGGGGAGCTGTTAATGCCGAACAGG
■■Homology search results ■■ -
sp_hit_id Q71LX6
Definition sp|Q71LX6|XIRP2_RAT Xin actin-binding repeat-containing protein 2 OS=Rattus norvegicus
Align length 56
Score (bit) 33.9
E-value 0.38
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921791|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_B11.
(474 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q71LX6|XIRP2_RAT Xin actin-binding repeat-containing protein ... 34 0.38
sp|Q8NBP5|MFSD9_HUMAN Major facilitator superfamily domain-conta... 32 1.4
sp|A4UGR9|XIRP2_HUMAN Xin actin-binding repeat-containing protei... 31 2.5

>sp|Q71LX6|XIRP2_RAT Xin actin-binding repeat-containing protein 2
OS=Rattus norvegicus GN=Xirp2 PE=2 SV=1
Length = 3302

Score = 33.9 bits (76), Expect = 0.38
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = -1

Query: 384 LQQVNAQLASQHNNSNKAGTLLHQTLINTCLLFLSQNYRRPYAVRL*SQTNANSLE 217
LQQ+ +++ +SNK+G QTL+N ++L +R Y VR+ + N ++
Sbjct: 2707 LQQILSRVKQFEADSNKSGLKTFQTLLNIAPVWLISEEKREYGVRVAMENNLEKVK 2762


>sp|Q8NBP5|MFSD9_HUMAN Major facilitator superfamily
domain-containing protein 9 OS=Homo sapiens GN=MFSD9
PE=2 SV=2
Length = 474

Score = 32.0 bits (71), Expect = 1.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3

Query: 187 AIGQETALYDNNFQILMMHDHLTDCAMITLYSL 89
A+G LY +N Q L++H + C ++ LYSL
Sbjct: 338 ALGPILRLYKHNSQALLLHSSILTCTLLLLYSL 370


>sp|A4UGR9|XIRP2_HUMAN Xin actin-binding repeat-containing protein 2
OS=Homo sapiens GN=XIRP2 PE=2 SV=2
Length = 3374

Score = 31.2 bits (69), Expect = 2.5
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -1

Query: 384 LQQVNAQLASQHNNSNKAGTLLHQTLINTCLLFLSQNYRRPYAVRL*SQTNANSLE 217
LQQ+ +++ NK+G QTL+NT +L +R YAV + + N ++
Sbjct: 2779 LQQILSRVKQFEAEPNKSGLKTFQTLLNTIPGWLISEDKREYAVHIAMENNLEKVK 2834


tr_hit_id A8ZU63
Definition tr|A8ZU63|A8ZU63_DESOH Ammonium transporter OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3)
Align length 18
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921791|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_B11.
(474 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8ZU63|A8ZU63_DESOH Ammonium transporter OS=Desulfococcus ole... 33 9.3

>tr|A8ZU63|A8ZU63_DESOH Ammonium transporter OS=Desulfococcus
oleovorans (strain DSM 6200 / Hxd3) GN=Dole_0565 PE=4
SV=1
Length = 428

Score = 32.7 bits (73), Expect = 9.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3

Query: 402 CSAYLTYGYAPVFHWIWG 455
C +LT+ Y+PV HW+WG
Sbjct: 153 CLLWLTFVYSPVAHWVWG 170