BP921802 |
Clone id |
YMU001_000154_C10 |
Library |
YMU01 |
Length |
557 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000154_C10. |
Accession |
BP921802 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL549Contig1 |
Sequence |
CTGGAAGAATTCGCGCCTTTCCTTGTCCATGTTGGGCTCTTGACCAACTGTAGCAGGCGA CCCTTTGCCAGTAACAGGCTTTGCCAAGTGTGTTGTCTTGGCACCATTGTCACATACCTT GAGAGTAGTAGACACGGGCCTGGGACTTTTCACATCTGATTCTTCGTTGCGCACTTTCAC AACTTGCTCGCCAATTTTTGGAAAGCTTTGAGGAGACCATTGCTGCTGAGGTTTGAGCTC AGGAACAGCCTTAATGGGCATGTTGCACAGAGGAAACTCATCTAGGATTGACGTGCGCAA AGGGTAGCTCTTGATAATATTGAGCATTTCCAGACCCTGCTGGAAGAAAACCTCTTGAGT GTCTCTGCTGTTTGTGACAGGTTTGTCTTCATTATTCTGTAGTATAATTCTTCGAAATTG CGAGTTTGGGACATCCTTTATAAAATGCCACTTCAAGGGGAATGAGCCACTCCACTTGTG CTGTTCCCAAAACTCCATGCTCCTCTTATAATCAACAGGCCCGGTCATCTCAGCAACGCC ACAAAACCGNCTGCTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P59326 |
Definition |
sp|P59326|YTHD1_MOUSE YTH domain family protein 1 OS=Mus musculus |
Align length |
94 |
Score (bit) |
117.0 |
E-value |
4.0e-26 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7Q4I8 |
Definition |
tr|A7Q4I8|A7Q4I8_VITVI Chromosome chr9 scaffold_49, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
114 |
Score (bit) |
155.0 |
E-value |
2.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921802|Adiantum capillus-veneris mRNA, clone: YMU001_000154_C10. (542 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7Q4I8|A7Q4I8_VITVI Chromosome chr9 scaffold_49, whole genome... 155 2e-36 tr|A5B5J0|A5B5J0_VITVI Putative uncharacterized protein OS=Vitis... 155 2e-36 tr|Q9LDZ8|Q9LDZ8_ARATH Gb|AAF35955.1 OS=Arabidopsis thaliana PE=... 154 3e-36 tr|Q0WR25|Q0WR25_ARATH Putative uncharacterized protein At3g1306... 154 3e-36 tr|Q9LJE5|Q9LJE5_ARATH Gb|AAD10646.1 (AT3g13460/MRP15_10) OS=Ara... 152 8e-36 tr|Q3MK93|Q3MK93_ARATH Putative uncharacterized protein OS=Arabi... 152 8e-36 tr|Q3EB70|Q3EB70_ARATH Uncharacterized protein At3g13460.2 OS=Ar... 152 8e-36 tr|Q2V3W2|Q2V3W2_ARATH Uncharacterized protein At3g13460.4 OS=Ar... 152 8e-36 tr|Q0WLM0|Q0WLM0_ARATH Putative uncharacterized protein At3g1346... 152 8e-36 tr|A5BZT5|A5BZT5_VITVI Putative uncharacterized protein OS=Vitis... 152 1e-35 tr|A7QP53|A7QP53_VITVI Chromosome chr1 scaffold_136, whole genom... 151 2e-35 tr|Q8H0S7|Q8H0S7_ARATH Putative uncharacterized protein At3g1346... 150 5e-35 tr|Q5QM96|Q5QM96_ORYSJ cDNA clone:J013046L18, full insert sequen... 149 7e-35 tr|Q5QM95|Q5QM95_ORYSJ Rubisco subunit binding-protein beta subu... 149 7e-35 tr|Q5QM94|Q5QM94_ORYSJ cDNA clone:J013144M15, full insert sequen... 149 7e-35 tr|A7NVV9|A7NVV9_VITVI Chromosome chr5 scaffold_2, whole genome ... 149 7e-35 tr|A5AJP6|A5AJP6_VITVI Putative uncharacterized protein OS=Vitis... 149 7e-35 tr|A2ZWJ5|A2ZWJ5_ORYSJ Putative uncharacterized protein OS=Oryza... 149 7e-35 tr|A2WTS8|A2WTS8_ORYSI Putative uncharacterized protein OS=Oryza... 149 7e-35 tr|A9T818|A9T818_PHYPA Predicted protein (Fragment) OS=Physcomit... 149 1e-34 tr|Q10MA6|Q10MA6_ORYSJ Os03g0317000 protein OS=Oryza sativa subs... 147 5e-34 tr|B8AMZ5|B8AMZ5_ORYSI Putative uncharacterized protein OS=Oryza... 147 5e-34 tr|A3AHC9|A3AHC9_ORYSJ Putative uncharacterized protein OS=Oryza... 147 5e-34 tr|B4FBI4|B4FBI4_MAIZE Putative uncharacterized protein OS=Zea m... 146 6e-34 tr|A7PFE6|A7PFE6_VITVI Chromosome chr11 scaffold_14, whole genom... 145 1e-33 tr|A5BU37|A5BU37_VITVI Putative uncharacterized protein OS=Vitis... 145 1e-33 tr|B4FF31|B4FF31_MAIZE Putative uncharacterized protein OS=Zea m... 145 1e-33 tr|Q9LUT8|Q9LUT8_ARATH Arabidopsis thaliana genomic DNA, chromos... 144 2e-33 tr|Q9FPE7|Q9FPE7_ARATH Putative uncharacterized protein At1g7927... 144 2e-33 tr|Q1JPL5|Q1JPL5_ARATH At3g17330 OS=Arabidopsis thaliana PE=2 SV=1 144 2e-33
>tr|A7Q4I8|A7Q4I8_VITVI Chromosome chr9 scaffold_49, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029708001 PE=4 SV=1 Length = 330
Score = 155 bits (391), Expect = 2e-36 Identities = 71/114 (62%), Positives = 90/114 (78%) Frame = -3
Query: 540 SXRFCGVAEMTGPVDYKRSMEFWEQHKWSGSFPLKWHFIKDVPNSQFRRIILQNNEDKPV 361 S +FCGVAEM GPVD+ +S+++W+Q KWSG FP+KWH IKDVPNSQFR I+L+NN++KPV Sbjct: 142 SAQFCGVAEMVGPVDFDKSVDYWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPV 201
Query: 360 TNSRDTQEVFFQQGLEMLNIIKSYPLRTSILDEFPLCNMPIKAVPELKPQQQWS 199 TNSRDTQEV +QG+E+LNI K+Y TSILD+F KA+ E K +QQ S Sbjct: 202 TNSRDTQEVKLEQGIEILNIFKNYETDTSILDDFDFYEDRQKAMQERKARQQAS 255
>tr|A5B5J0|A5B5J0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032053 PE=4 SV=1 Length = 744
Score = 155 bits (391), Expect = 2e-36 Identities = 71/114 (62%), Positives = 90/114 (78%) Frame = -3
Query: 540 SXRFCGVAEMTGPVDYKRSMEFWEQHKWSGSFPLKWHFIKDVPNSQFRRIILQNNEDKPV 361 S +FCGVAEM GPVD+ +S+++W+Q KWSG FP+KWH IKDVPNSQFR I+L+NN++KPV Sbjct: 556 SAQFCGVAEMVGPVDFDKSVDYWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPV 615
Query: 360 TNSRDTQEVFFQQGLEMLNIIKSYPLRTSILDEFPLCNMPIKAVPELKPQQQWS 199 TNSRDTQEV +QG+E+LNI K+Y TSILD+F KA+ E K +QQ S Sbjct: 616 TNSRDTQEVKLEQGIEILNIFKNYETDTSILDDFDFYEDRQKAMQERKARQQAS 669
>tr|Q9LDZ8|Q9LDZ8_ARATH Gb|AAF35955.1 OS=Arabidopsis thaliana PE=4 SV=1 Length = 503
Score = 154 bits (389), Expect = 3e-36 Identities = 78/157 (49%), Positives = 102/157 (64%) Frame = -3
Query: 540 SXRFCGVAEMTGPVDYKRSMEFWEQHKWSGSFPLKWHFIKDVPNSQFRRIILQNNEDKPV 361 S +FCGVAEM GPVD+++S+++W+Q KWSG FP+KWH IKDVPNSQFR IIL+NN++KPV Sbjct: 324 SSQFCGVAEMVGPVDFEKSVDYWQQDKWSGQFPVKWHIIKDVPNSQFRHIILENNDNKPV 383
Query: 360 TNSRDTQEVFFQQGLEMLNIIKSYPLRTSILDEFPLCNMPIKAVPELKPQQQWSPQSFPK 181 TNSRDTQEV +QG+EML I K+Y TSILD+F K + + K ++Q S P Sbjct: 384 TNSRDTQEVKLEQGIEMLKIFKNYDADTSILDDFGFYEEREKIIQDRKARRQ---PSLPS 440
Query: 180 IGEQVVKVRNEESDVKSPRPVSTTLKVCDNGAKTTHL 70 G VV NE + P + + A+ L Sbjct: 441 AG--VVAGENEHKPASAALPTDFMKNMSKSFAQVVRL 475
>tr|Q0WR25|Q0WR25_ARATH Putative uncharacterized protein At3g13060 OS=Arabidopsis thaliana GN=At3g13060 PE=2 SV=1 Length = 634
Score = 154 bits (389), Expect = 3e-36 Identities = 78/157 (49%), Positives = 102/157 (64%) Frame = -3
Query: 540 SXRFCGVAEMTGPVDYKRSMEFWEQHKWSGSFPLKWHFIKDVPNSQFRRIILQNNEDKPV 361 S +FCGVAEM GPVD+++S+++W+Q KWSG FP+KWH IKDVPNSQFR IIL+NN++KPV Sbjct: 455 SSQFCGVAEMVGPVDFEKSVDYWQQDKWSGQFPVKWHIIKDVPNSQFRHIILENNDNKPV 514
Query: 360 TNSRDTQEVFFQQGLEMLNIIKSYPLRTSILDEFPLCNMPIKAVPELKPQQQWSPQSFPK 181 TNSRDTQEV +QG+EML I K+Y TSILD+F K + + K ++Q S P Sbjct: 515 TNSRDTQEVKLEQGIEMLKIFKNYDADTSILDDFGFYEEREKIIQDRKARRQ---PSLPS 571
Query: 180 IGEQVVKVRNEESDVKSPRPVSTTLKVCDNGAKTTHL 70 G VV NE + P + + A+ L Sbjct: 572 AG--VVAGENEHKPASAALPTDFMKNMSKSFAQVVRL 606
>tr|Q9LJE5|Q9LJE5_ARATH Gb|AAD10646.1 (AT3g13460/MRP15_10) OS=Arabidopsis thaliana GN=At3g13460 PE=2 SV=1 Length = 667
Score = 152 bits (385), Expect = 8e-36 Identities = 80/166 (48%), Positives = 111/166 (66%), Gaps = 3/166 (1%) Frame = -3
Query: 540 SXRFCGVAEMTGPVDYKRSMEFWEQHKWSGSFPLKWHFIKDVPNSQFRRIILQNNEDKPV 361 S +F G+AEMTGPVD+ ++E+W+Q KW+GSFPLKWH +KDVPNS + I L+NNE+KPV Sbjct: 499 SGQFVGLAEMTGPVDFNTNVEYWQQDKWTGSFPLKWHIVKDVPNSLLKHITLENNENKPV 558
Query: 360 TNSRDTQEVFFQQGLEMLNIIKSYPLRTSILDEFPLCNMPIKAVPELKPQQQWSPQSFPK 181 TNSRDTQEV +QGL+++ I K + +T ILD+F + K + E K +Q S K Sbjct: 559 TNSRDTQEVKLEQGLKIVKIFKEHSSKTCILDDFSFYEVRQKTILEKKAKQTQKQVSEEK 618
Query: 180 IGEQVVKVRNEESDVK-SPRPVSTT--LKVCDNGAKTTHLAKPVTG 52 + ++ + ES K SP V T+ +KV +NG+ +AKPVTG Sbjct: 619 VTDEKKESATAESASKESPAAVQTSSDVKVAENGS----VAKPVTG 660
>tr|Q3MK93|Q3MK93_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 652
Score = 152 bits (385), Expect = 8e-36 Identities = 80/166 (48%), Positives = 111/166 (66%), Gaps = 3/166 (1%) Frame = -3
Query: 540 SXRFCGVAEMTGPVDYKRSMEFWEQHKWSGSFPLKWHFIKDVPNSQFRRIILQNNEDKPV 361 S +F G+AEMTGPVD+ ++E+W+Q KW+GSFPLKWH +KDVPNS + I L+NNE+KPV Sbjct: 484 SGQFVGLAEMTGPVDFNTNVEYWQQDKWTGSFPLKWHIVKDVPNSLLKHITLENNENKPV 543
Query: 360 TNSRDTQEVFFQQGLEMLNIIKSYPLRTSILDEFPLCNMPIKAVPELKPQQQWSPQSFPK 181 TNSRDTQEV +QGL+++ I K + +T ILD+F + K + E K +Q S K Sbjct: 544 TNSRDTQEVKLEQGLKIVKIFKEHSSKTCILDDFSFYEVRQKTILEKKAKQTQKQVSEEK 603
Query: 180 IGEQVVKVRNEESDVK-SPRPVSTT--LKVCDNGAKTTHLAKPVTG 52 + ++ + ES K SP V T+ +KV +NG+ +AKPVTG Sbjct: 604 VTDEKKESATAESASKESPAAVQTSSDVKVAENGS----VAKPVTG 645
>tr|Q3EB70|Q3EB70_ARATH Uncharacterized protein At3g13460.2 OS=Arabidopsis thaliana GN=At3g13460 PE=4 SV=1 Length = 664
Score = 152 bits (385), Expect = 8e-36 Identities = 80/166 (48%), Positives = 111/166 (66%), Gaps = 3/166 (1%) Frame = -3
Query: 540 SXRFCGVAEMTGPVDYKRSMEFWEQHKWSGSFPLKWHFIKDVPNSQFRRIILQNNEDKPV 361 S +F G+AEMTGPVD+ ++E+W+Q KW+GSFPLKWH +KDVPNS + I L+NNE+KPV Sbjct: 496 SGQFVGLAEMTGPVDFNTNVEYWQQDKWTGSFPLKWHIVKDVPNSLLKHITLENNENKPV 555
Query: 360 TNSRDTQEVFFQQGLEMLNIIKSYPLRTSILDEFPLCNMPIKAVPELKPQQQWSPQSFPK 181 TNSRDTQEV +QGL+++ I K + +T ILD+F + K + E K +Q S K Sbjct: 556 TNSRDTQEVKLEQGLKIVKIFKEHSSKTCILDDFSFYEVRQKTILEKKAKQTQKQVSEEK 615
Query: 180 IGEQVVKVRNEESDVK-SPRPVSTT--LKVCDNGAKTTHLAKPVTG 52 + ++ + ES K SP V T+ +KV +NG+ +AKPVTG Sbjct: 616 VTDEKKESATAESASKESPAAVQTSSDVKVAENGS----VAKPVTG 657
>tr|Q2V3W2|Q2V3W2_ARATH Uncharacterized protein At3g13460.4 OS=Arabidopsis thaliana GN=At3g13460 PE=4 SV=1 Length = 666
Score = 152 bits (385), Expect = 8e-36 Identities = 80/166 (48%), Positives = 111/166 (66%), Gaps = 3/166 (1%) Frame = -3
Query: 540 SXRFCGVAEMTGPVDYKRSMEFWEQHKWSGSFPLKWHFIKDVPNSQFRRIILQNNEDKPV 361 S +F G+AEMTGPVD+ ++E+W+Q KW+GSFPLKWH +KDVPNS + I L+NNE+KPV Sbjct: 498 SGQFVGLAEMTGPVDFNTNVEYWQQDKWTGSFPLKWHIVKDVPNSLLKHITLENNENKPV 557
Query: 360 TNSRDTQEVFFQQGLEMLNIIKSYPLRTSILDEFPLCNMPIKAVPELKPQQQWSPQSFPK 181 TNSRDTQEV +QGL+++ I K + +T ILD+F + K + E K +Q S K Sbjct: 558 TNSRDTQEVKLEQGLKIVKIFKEHSSKTCILDDFSFYEVRQKTILEKKAKQTQKQVSEEK 617
Query: 180 IGEQVVKVRNEESDVK-SPRPVSTT--LKVCDNGAKTTHLAKPVTG 52 + ++ + ES K SP V T+ +KV +NG+ +AKPVTG Sbjct: 618 VTDEKKESATAESASKESPAAVQTSSDVKVAENGS----VAKPVTG 659
>tr|Q0WLM0|Q0WLM0_ARATH Putative uncharacterized protein At3g13460 (Fragment) OS=Arabidopsis thaliana GN=At3g13460 PE=2 SV=1 Length = 235
Score = 152 bits (385), Expect = 8e-36 Identities = 80/166 (48%), Positives = 111/166 (66%), Gaps = 3/166 (1%) Frame = -3
Query: 540 SXRFCGVAEMTGPVDYKRSMEFWEQHKWSGSFPLKWHFIKDVPNSQFRRIILQNNEDKPV 361 S +F G+AEMTGPVD+ ++E+W+Q KW+GSFPLKWH +KDVPNS + I L+NNE+KPV Sbjct: 67 SGQFVGLAEMTGPVDFNTNVEYWQQDKWTGSFPLKWHIVKDVPNSLLKHITLENNENKPV 126
Query: 360 TNSRDTQEVFFQQGLEMLNIIKSYPLRTSILDEFPLCNMPIKAVPELKPQQQWSPQSFPK 181 TNSRDTQEV +QGL+++ I K + +T ILD+F + K + E K +Q S K Sbjct: 127 TNSRDTQEVKLEQGLKIVKIFKEHSSKTCILDDFSFYEVRQKTILEKKAKQTQKQVSEEK 186
Query: 180 IGEQVVKVRNEESDVK-SPRPVSTT--LKVCDNGAKTTHLAKPVTG 52 + ++ + ES K SP V T+ +KV +NG+ +AKPVTG Sbjct: 187 VTDEKKESATAESASKESPAAVQTSSDVKVAENGS----VAKPVTG 228
>tr|A5BZT5|A5BZT5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001734 PE=4 SV=1 Length = 541
Score = 152 bits (383), Expect = 1e-35 Identities = 71/121 (58%), Positives = 91/121 (75%) Frame = -3
Query: 540 SXRFCGVAEMTGPVDYKRSMEFWEQHKWSGSFPLKWHFIKDVPNSQFRRIILQNNEDKPV 361 S +FCGVAEM GPVDY +S+++W+Q KW+G FP+KWH IKDVPNSQFR IIL+NN++KPV Sbjct: 357 SAQFCGVAEMVGPVDYDKSVDYWKQDKWTGQFPVKWHIIKDVPNSQFRHIILENNDNKPV 416
Query: 360 TNSRDTQEVFFQQGLEMLNIIKSYPLRTSILDEFPLCNMPIKAVPELKPQQQWSPQSFPK 181 TNSRDTQEV +QG EMLNI ++Y +SILD+F KA+ E K Q + S + P Sbjct: 417 TNSRDTQEVELEQGNEMLNIFRNYESDSSILDDFDFYEDRQKAIEEKKTQHKASLLAAPM 476
Query: 180 I 178 + Sbjct: 477 V 477
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