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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921803
Clone id YMU001_000154_C11
Library
Length 331
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000154_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTGGTTGGTTGTGCACTTAGGTGTAATCCAACTTTACTGCAGTCACTATGAAATACTTCA
ATCTCTCAACTGGTTGTTATGAGCTGTCTTCACTATTGGCGGATGTAGGTTTGAATATTC
GCGAGGCTCATGTATTTTCGACGACTGATGGCTTTTCTTTGGATGTGTTTATAGTTCATG
GGTGGCATGTAGAGGAGCAATGCAGAGCCCAACAATGCTGACTTCATGGCATGATGTGGT
CAGGACACTGAAGATTTGGAACAAGCTTTACGGAATGCTCTCAGTCTCATAGGGAAAGAA
GCATGGAAAAGAGCGTCCCCATCATCTTTAC
■■Homology search results ■■ -
sp_hit_id Q8SRG3
Definition sp|Q8SRG3|AMP12_ENCCU Probable M1 family aminopeptidase 2 OS=Encephalitozoon cuniculi
Align length 56
Score (bit) 33.1
E-value 0.45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921803|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_C11.
         (331 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8SRG3|AMP12_ENCCU Probable M1 family aminopeptidase 2 OS=Enc...    33   0.45 
sp|Q8SQI6|AMP11_ENCCU Probable M1 family aminopeptidase 1 OS=Enc...    33   0.45 
sp|Q8RQD1|GLND_AZOBR [Protein-PII] uridylyltransferase OS=Azospi...    31   2.2  
sp|P32082|GHRHR_MOUSE Growth hormone-releasing hormone receptor ...    30   2.9  
sp|Q6P280|ZN529_HUMAN Zinc finger protein 529 OS=Homo sapiens GN...    30   4.9  
sp|O83195|SYP_TREPA Prolyl-tRNA synthetase OS=Treponema pallidum...    30   4.9  
sp|Q02644|GHRHR_RAT Growth hormone-releasing hormone receptor OS...    30   4.9  
sp|Q8UIF1|GLND_AGRT5 [Protein-PII] uridylyltransferase OS=Agroba...    30   5.0  
sp|Q5QXT0|GLND_IDILO [Protein-PII] uridylyltransferase OS=Idioma...    29   6.5  
sp|Q3Z5J1|GLND_SHISS [Protein-PII] uridylyltransferase OS=Shigel...    29   8.4  
sp|Q83MD4|GLND_SHIFL [Protein-PII] uridylyltransferase OS=Shigel...    29   8.4  
sp|Q0T842|GLND_SHIF8 [Protein-PII] uridylyltransferase OS=Shigel...    29   8.4  
sp|Q32JU2|GLND_SHIDS [Protein-PII] uridylyltransferase OS=Shigel...    29   8.4  
sp|Q325X3|GLND_SHIBS [Protein-PII] uridylyltransferase OS=Shigel...    29   8.4  
sp|P23679|GLND_SALTY [Protein-PII] uridylyltransferase OS=Salmon...    29   8.4  
sp|Q8Z9A7|GLND_SALTI [Protein-PII] uridylyltransferase OS=Salmon...    29   8.4  
sp|Q5PD56|GLND_SALPA [Protein-PII] uridylyltransferase OS=Salmon...    29   8.4  
sp|Q57T41|GLND_SALCH [Protein-PII] uridylyltransferase OS=Salmon...    29   8.4  
sp|A9MPJ5|GLND_SALAR [Protein-PII] uridylyltransferase OS=Salmon...    29   8.4  
sp|P41393|GLND_KLEOX [Protein-PII] uridylyltransferase OS=Klebsi...    29   8.4  
sp|Q1RG23|GLND_ECOUT [Protein-PII] uridylyltransferase OS=Escher...    29   8.4  
sp|P27249|GLND_ECOLI [Protein-PII] uridylyltransferase OS=Escher...    29   8.4  
sp|B1IQH4|GLND_ECOLC [Protein-PII] uridylyltransferase OS=Escher...    29   8.4  
sp|Q8CY19|GLND_ECOL6 [Protein-PII] uridylyltransferase OS=Escher...    29   8.4  
sp|Q0TLG6|GLND_ECOL5 [Protein-PII] uridylyltransferase OS=Escher...    29   8.4  
sp|A1A7L1|GLND_ECOK1 [Protein-PII] uridylyltransferase OS=Escher...    29   8.4  
sp|A7ZWB3|GLND_ECOHS [Protein-PII] uridylyltransferase OS=Escher...    29   8.4  
sp|Q8X8Y6|GLND_ECO57 [Protein-PII] uridylyltransferase OS=Escher...    29   8.4  
sp|A7ZHQ7|GLND_ECO24 [Protein-PII] uridylyltransferase OS=Escher...    29   8.4  
sp|A8ALC3|GLND_CITK8 [Protein-PII] uridylyltransferase OS=Citrob...    29   8.4  

>sp|Q8SRG3|AMP12_ENCCU Probable M1 family aminopeptidase 2
           OS=Encephalitozoon cuniculi GN=ECU08_0070 PE=3 SV=1
          Length = 864

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 20/56 (35%), Positives = 32/56 (57%)
 Frame = +2

Query: 137 FDD*WLFFGCVYSSWVACRGAMQSPTMLTSWHDVVRTLKIWNKLYGMLSVS*GKKH 304
           +DD WL  G  +++WV+ +G M++   + SW DV     +WN + GM+    GK H
Sbjct: 341 WDDLWLNEG--FATWVSFKG-MENIGSVVSW-DVWGEFVLWNVVRGMVDDGLGKSH 392


>sp|Q8SQI6|AMP11_ENCCU Probable M1 family aminopeptidase 1
           OS=Encephalitozoon cuniculi GN=ECU01_0140 PE=3 SV=1
          Length = 864

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 20/56 (35%), Positives = 32/56 (57%)
 Frame = +2

Query: 137 FDD*WLFFGCVYSSWVACRGAMQSPTMLTSWHDVVRTLKIWNKLYGMLSVS*GKKH 304
           +DD WL  G  +++WV+ +G M++   + SW DV     +WN + GM+    GK H
Sbjct: 341 WDDLWLNEG--FATWVSFKG-MENIGSVVSW-DVWGEFVLWNVVRGMVDDGLGKSH 392


>sp|Q8RQD1|GLND_AZOBR [Protein-PII] uridylyltransferase
           OS=Azospirillum brasilense GN=glnD PE=3 SV=1
          Length = 933

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +3

Query: 84  LSSLLADVGLNIREAHVFSTTDGFSLDVFIV 176
           L+  LA  G +I +A +F+ T+G +LDVF V
Sbjct: 761 LAGALAAAGADIVDARIFTMTNGMALDVFTV 791


>sp|P32082|GHRHR_MOUSE Growth hormone-releasing hormone receptor
           OS=Mus musculus GN=Ghrhr PE=1 SV=1
          Length = 423

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = -2

Query: 321 WGRSFP-----CFFPYETESIP*SLFQIFSVLTTSCHEVSIVGLCIA 196
           W   FP     C  P E  +   S F    ++ T+ H +SIV LC+A
Sbjct: 101 WSNPFPPYPVACPVPLELLTKEKSYFSTVKIIYTTGHSISIVALCVA 147


>sp|Q6P280|ZN529_HUMAN Zinc finger protein 529 OS=Homo sapiens
           GN=ZNF529 PE=2 SV=1
          Length = 530

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -2

Query: 195 PLHATHEL*THPKKSHQSSKIHEPREYSNL 106
           P + THE  T P+++H S K +E +EY  +
Sbjct: 117 PSYKTHESLTLPRRTHDSEKPYEYKEYEKV 146


>sp|O83195|SYP_TREPA Prolyl-tRNA synthetase OS=Treponema pallidum
           GN=proS PE=1 SV=1
          Length = 617

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 195 PLHATHEL*THPKKSHQSSKIHEPREYSNLHPPIVKT 85
           PL  TH+  TH K  H+ S +  P     +H P VKT
Sbjct: 239 PLPDTHD--THLKDEHEGSDLKTPAAMREVHTPHVKT 273


>sp|Q02644|GHRHR_RAT Growth hormone-releasing hormone receptor
           OS=Rattus norvegicus GN=Ghrhr PE=2 SV=2
          Length = 464

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = -2

Query: 321 WGRSFP-----CFFPYETESIP*SLFQIFSVLTTSCHEVSIVGLCIA 196
           W   FP     C  P E  +   S F    ++ T+ H +SIV LC+A
Sbjct: 101 WSDPFPPYPVACPVPLELLTEEKSYFSTVKIIYTTGHSISIVALCVA 147


>sp|Q8UIF1|GLND_AGRT5 [Protein-PII] uridylyltransferase
           OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
           GN=glnD PE=3 SV=1
          Length = 942

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 84  LSSLLADVGLNIREAHVFSTTDGFSLDVFIVH 179
           ++   A  G NI +A +F+T+DG +LD  +++
Sbjct: 745 ITGACAAAGANIADAQIFTTSDGRALDTILIN 776


>sp|Q5QXT0|GLND_IDILO [Protein-PII] uridylyltransferase
           OS=Idiomarina loihiensis GN=glnD PE=3 SV=1
          Length = 879

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 84  LSSLLADVGLNIREAHVFSTTDGFSLDVFIV 176
           ++ +L    LNI +A + +T DGF +D F+V
Sbjct: 716 VAGVLDSQQLNILDAQILATRDGFVMDTFVV 746


>sp|Q3Z5J1|GLND_SHISS [Protein-PII] uridylyltransferase OS=Shigella
           sonnei (strain Ss046) GN=glnD PE=3 SV=1
          Length = 890

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +3

Query: 111 LNIREAHVFSTTDGFSLDVFIV 176
           L++ +A +F+T DG ++D FIV
Sbjct: 733 LSVHDAQIFTTRDGMAMDTFIV 754
tr_hit_id A9SWW2
Definition tr|A9SWW2|A9SWW2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 39
Score (bit) 67.0
E-value 8.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921803|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_C11.
         (331 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SWW2|A9SWW2_PHYPA Predicted protein OS=Physcomitrella paten...    67   8e-14
tr|A9RVT3|A9RVT3_PHYPA Predicted protein OS=Physcomitrella paten...    67   2e-11
tr|A9TLA1|A9TLA1_PHYPA Predicted protein OS=Physcomitrella paten...    67   6e-11
tr|B6UD76|B6UD76_MAIZE ATP binding protein OS=Zea mays PE=2 SV=1       69   2e-10
tr|A9SVV0|A9SVV0_PHYPA Predicted protein OS=Physcomitrella paten...    69   2e-10
tr|A9S2K7|A9S2K7_PHYPA Predicted protein OS=Physcomitrella paten...    68   2e-10
tr|A9RMB5|A9RMB5_PHYPA Predicted protein OS=Physcomitrella paten...    63   2e-10
tr|A7QMZ1|A7QMZ1_VITVI Chromosome undetermined scaffold_129, who...    66   7e-10
tr|B6SZ72|B6SZ72_MAIZE ATP binding protein OS=Zea mays PE=2 SV=1       65   2e-09
tr|B6U1Z4|B6U1Z4_MAIZE ATP binding protein OS=Zea mays PE=2 SV=1       64   4e-09
tr|Q9SZM7|Q9SZM7_ARATH Protein kinase like protein OS=Arabidopsi...    64   5e-09
tr|Q7XXN2|Q7XXN2_ORYSJ Os09g0544300 protein OS=Oryza sativa subs...    64   5e-09
tr|B6U0Y9|B6U0Y9_MAIZE ATP binding protein OS=Zea mays PE=2 SV=1       64   5e-09
tr|A3C153|A3C153_ORYSJ Putative uncharacterized protein OS=Oryza...    64   5e-09
tr|A2Z3N4|A2Z3N4_ORYSI Putative uncharacterized protein OS=Oryza...    64   5e-09
tr|Q2QXA8|Q2QXA8_ORYSJ cDNA, clone: J100060A02, full insert sequ...    63   6e-09
tr|Q0IPW2|Q0IPW2_ORYSJ Os12g0163800 protein OS=Oryza sativa subs...    63   6e-09
tr|B8BNB9|B8BNB9_ORYSI Putative uncharacterized protein OS=Oryza...    63   6e-09
tr|A7R581|A7R581_VITVI Chromosome undetermined scaffold_902, who...    63   6e-09
tr|A5AID9|A5AID9_VITVI Putative uncharacterized protein OS=Vitis...    63   6e-09
tr|A3CF86|A3CF86_ORYSJ Putative uncharacterized protein OS=Oryza...    63   6e-09
tr|Q69U56|Q69U56_ORYSJ Serine/threonine protein kinase-like OS=O...    62   1e-08
tr|Q0J8N2|Q0J8N2_ORYSJ Os08g0103000 protein (Fragment) OS=Oryza ...    62   1e-08
tr|B8B9Y1|B8B9Y1_ORYSI Putative uncharacterized protein OS=Oryza...    62   1e-08
tr|A3BNT9|A3BNT9_ORYSJ Putative uncharacterized protein OS=Oryza...    62   1e-08
tr|O81808|O81808_ARATH Putative uncharacterized protein F8D20.29...    62   2e-08
tr|Q56XF0|Q56XF0_ARATH Putative uncharacterized protein At2g1770...    61   2e-08
tr|O22558|O22558_ARATH Putative uncharacterized protein At2g1770...    61   2e-08
tr|B7FLQ2|B7FLQ2_MEDTR Putative uncharacterized protein OS=Medic...    61   2e-08
tr|Q8RWL6|Q8RWL6_ARATH Putative uncharacterized protein At4g3578...    60   4e-08

>tr|A9SWW2|A9SWW2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_136578 PE=4 SV=1
          Length = 560

 Score = 67.0 bits (162), Expect(2) = 8e-14
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = +3

Query: 81  ELSSLLADVGLNIREAHVFSTTDGFSLDVFIVHGWHVEE 197
           ++S+LLADVGLNIREAHVFSTTDG+SLDVF+V GW  E+
Sbjct: 176 QMSALLADVGLNIREAHVFSTTDGYSLDVFVVDGWPSED 214



 Score = 32.7 bits (73), Expect(2) = 8e-14
 Identities = 14/30 (46%), Positives = 24/30 (80%)
 Frame = +1

Query: 241 QDTEDLEQALRNALSLIGKEAWKRASPSSL 330
           +DT++L +AL +ALS +GK AW +AS +++
Sbjct: 213 EDTQNLRRALFSALSAMGKGAWVKASSATV 242


>tr|A9RVT3|A9RVT3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_178475 PE=4 SV=1
          Length = 572

 Score = 67.0 bits (162), Expect(2) = 2e-11
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = +3

Query: 81  ELSSLLADVGLNIREAHVFSTTDGFSLDVFIVHGWHVEE 197
           ++S+LLADVGLNIREAHVFSTTDG+SLDVF+V GW  E+
Sbjct: 187 QMSALLADVGLNIREAHVFSTTDGYSLDVFVVDGWPSED 225



 Score = 25.0 bits (53), Expect(2) = 2e-11
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
 Frame = +1

Query: 241 QDTEDLEQALRNALSLIGKEAWKRA-----SPSS 327
           +DT DL +AL +ALS + +  W +      SPSS
Sbjct: 224 EDTHDLRRALFSALSAMEEGVWLKTPAATESPSS 257


>tr|A9TLA1|A9TLA1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_147244 PE=4 SV=1
          Length = 520

 Score = 67.0 bits (162), Expect(2) = 6e-11
 Identities = 31/38 (81%), Positives = 35/38 (92%)
 Frame = +3

Query: 81  ELSSLLADVGLNIREAHVFSTTDGFSLDVFIVHGWHVE 194
           +LS+LLADVGLNIREAHVFSTTDG+SLDVF+V GW  E
Sbjct: 162 QLSALLADVGLNIREAHVFSTTDGYSLDVFVVDGWPSE 199



 Score = 23.1 bits (48), Expect(2) = 6e-11
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 250 EDLEQALRNALSLIGKEAWKRASP 321
           EDL++ALR ALS++   A     P
Sbjct: 202 EDLKRALRQALSILEPAALTSPKP 225


>tr|B6UD76|B6UD76_MAIZE ATP binding protein OS=Zea mays PE=2 SV=1
          Length = 534

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 30/39 (76%), Positives = 37/39 (94%)
 Frame = +3

Query: 81  ELSSLLADVGLNIREAHVFSTTDGFSLDVFIVHGWHVEE 197
           +LS+LL+D+GLNI+EAHVFSTTDG+SLDVF+V GW VEE
Sbjct: 175 QLSALLSDIGLNIKEAHVFSTTDGYSLDVFVVDGWPVEE 213


>tr|A9SVV0|A9SVV0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_188912 PE=4 SV=1
          Length = 546

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 32/39 (82%), Positives = 35/39 (89%)
 Frame = +3

Query: 81  ELSSLLADVGLNIREAHVFSTTDGFSLDVFIVHGWHVEE 197
           +LS+LLADVGLNIREAHVFSTTDGFSLDVFIV GW   +
Sbjct: 170 QLSALLADVGLNIREAHVFSTTDGFSLDVFIVDGWSTRD 208


>tr|A9S2K7|A9S2K7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_123192 PE=4 SV=1
          Length = 552

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = +3

Query: 81  ELSSLLADVGLNIREAHVFSTTDGFSLDVFIVHGWHVEEQCRAQ 212
           +LS+LLADVGLNIREAHVFSTT G+SLDVF+V GW  EE  R Q
Sbjct: 200 QLSALLADVGLNIREAHVFSTTSGYSLDVFVVDGWPSEETERLQ 243


>tr|A9RMB5|A9RMB5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_203860 PE=4 SV=1
          Length = 582

 Score = 63.2 bits (152), Expect(2) = 2e-10
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = +3

Query: 81  ELSSLLADVGLNIREAHVFSTTDGFSLDVFIVHGWHVEE 197
           ++S+LLADVGLNI EAHVFSTTDG+SL VF+V GW  EE
Sbjct: 193 QMSALLADVGLNILEAHVFSTTDGYSLAVFVVDGWQSEE 231



 Score = 25.0 bits (53), Expect(2) = 2e-10
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 241 QDTEDLEQALRNALSLIGKEAWKRASPSS 327
           ++ ++L +AL  ALS + K AW + S  S
Sbjct: 230 EEIQELTRALSRALSAMEKGAWAKPSSKS 258


>tr|A7QMZ1|A7QMZ1_VITVI Chromosome undetermined scaffold_129, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00002272001 PE=4 SV=1
          Length = 553

 Score = 66.2 bits (160), Expect = 7e-10
 Identities = 29/39 (74%), Positives = 36/39 (92%)
 Frame = +3

Query: 81  ELSSLLADVGLNIREAHVFSTTDGFSLDVFIVHGWHVEE 197
           +LS+LL+D+GLNIREAHVFST DG+SLDVF+V GW VE+
Sbjct: 179 QLSALLSDIGLNIREAHVFSTIDGYSLDVFVVDGWPVED 217


>tr|B6SZ72|B6SZ72_MAIZE ATP binding protein OS=Zea mays PE=2 SV=1
          Length = 562

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 29/39 (74%), Positives = 35/39 (89%)
 Frame = +3

Query: 81  ELSSLLADVGLNIREAHVFSTTDGFSLDVFIVHGWHVEE 197
           +LS+LL++VGLNIREAHVFSTTDGF LDVF+V GW  +E
Sbjct: 198 QLSALLSEVGLNIREAHVFSTTDGFCLDVFVVDGWDTKE 236


>tr|B6U1Z4|B6U1Z4_MAIZE ATP binding protein OS=Zea mays PE=2 SV=1
          Length = 525

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 27/39 (69%), Positives = 36/39 (92%)
 Frame = +3

Query: 81  ELSSLLADVGLNIREAHVFSTTDGFSLDVFIVHGWHVEE 197
           +LS+LL+D+GLNIREAHVFST DG+SLDVF+V GW +++
Sbjct: 166 QLSALLSDIGLNIREAHVFSTHDGYSLDVFVVDGWPIKD 204