BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921805|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_D04.
         (272 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8BXJ2|TREF1_MOUSE Transcriptional-regulating factor 1 OS=Mus...    29   8.4  
sp|Q80XQ2|TBCD5_MOUSE TBC1 domain family member 5 OS=Mus musculu...    29   8.4  
sp|Q92609|TBCD5_HUMAN TBC1 domain family member 5 OS=Homo sapien...    29   8.4  

>sp|Q8BXJ2|TREF1_MOUSE Transcriptional-regulating factor 1 OS=Mus
           musculus GN=Trerf1 PE=2 SV=1
          Length = 1205

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = -3

Query: 93  RATMEWKAWKSLVNDAL--KMENVMDL 19
           RAT+ WK W  L N AL  ++EN+++L
Sbjct: 812 RATLVWKPWPELENQALQQQVENLLNL 838


>sp|Q80XQ2|TBCD5_MOUSE TBC1 domain family member 5 OS=Mus musculus
           GN=Tbc1d5 PE=1 SV=1
          Length = 815

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 127 EITESIYRFRMLGTFFKTQIPLFDLLIIW 213
           EI   IY  R +   F  + PL DLL++W
Sbjct: 324 EIAPQIYGLRWVRLLFGREFPLQDLLVVW 352


>sp|Q92609|TBCD5_HUMAN TBC1 domain family member 5 OS=Homo sapiens
           GN=TBC1D5 PE=1 SV=1
          Length = 795

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 127 EITESIYRFRMLGTFFKTQIPLFDLLIIW 213
           EI   IY  R +   F  + PL DLL++W
Sbjct: 324 EIAPQIYGLRWVRLLFGREFPLQDLLVVW 352

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921805|Adiantum capillus-veneris mRNA, clone:
YMU001_000154_D04.
         (272 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q88G13|Q88G13_PSEPK Putative uncharacterized protein OS=Pseud...    33   9.1  

>tr|Q88G13|Q88G13_PSEPK Putative uncharacterized protein
           OS=Pseudomonas putida (strain KT2440) GN=PP3913 PE=4
           SV=1
          Length = 229

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -3

Query: 219 LLPDD*EIEEW-NLSFEESPQHPEPV 145
           L P + E+E W NL+ E +PQHPEP+
Sbjct: 83  LRPAEFEVESWHNLAAEPAPQHPEPI 108