| BP921809 |
| Clone id |
YMU001_000154_D08 |
| Library |
YMU01 |
| Length |
447 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000154_D08. |
| Accession |
BP921809 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL1503Contig1 |
| Sequence |
TGCGAATGCTGGCCCAAATGTCTCCGAATCTGGTAAGAATACATTGACCCTCTGGACTTC AATGTTTCCTAAGCTGTTCCAAATTTTGTGGGCAGTGAAATGAGACCTGTCGACTGATTC CCAATCACTGCATTCCACATATTGTTCTCCAAAAGATAATAGGAACCTTCCTCCAGAAAA ATTGAAACCAAAGACATAAATCTGTGTGTGGCAGCCTGCCTCTAAACTACGAGGGTAAAG ATCCACTACAAATGGGGCCAACAGATCTTTACAAAACGCACTCGTAGCCTTACCATCTTT CAAAACTAAGCTCTTCTCAACCAACGGCATAGAAAGTTGCCCAGTTCCAACCAACTTGAC TCCTTACTTGAGGATAAAAGTCTGCACTTGTCCCTTCCATTCAGCCAATACCTTGTCCCA CATGACTTGTGGCATTGTAACAAAAAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q8S9G8 |
| Definition |
sp|Q8S9G8|SPL7_ARATH Squamosa promoter-binding-like protein 7 OS=Arabidopsis thaliana |
| Align length |
150 |
| Score (bit) |
52.8 |
| E-value |
7.0e-07 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
B8LQP1 |
| Definition |
tr|B8LQP1|B8LQP1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
| Align length |
157 |
| Score (bit) |
57.4 |
| E-value |
4.0e-07 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921809|Adiantum capillus-veneris mRNA, clone: YMU001_000154_D08. (447 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LQP1|B8LQP1_PICSI Putative uncharacterized protein OS=Picea... 57 4e-07 tr|A7NWA8|A7NWA8_VITVI Chromosome chr5 scaffold_2, whole genome ... 52 1e-05 tr|B8AY86|B8AY86_ORYSI Putative uncharacterized protein OS=Oryza... 47 5e-04 tr|A3B3Y6|A3B3Y6_ORYSJ Putative uncharacterized protein OS=Oryza... 47 5e-04 tr|B1LSG6|B1LSG6_METRJ Bacteriochlorophyll/chlorophyll synthetas... 37 0.48 tr|Q1KUV0|Q1KUV0_9ROSI Putative uncharacterized protein OS=Cleom... 35 1.4 tr|A6L189|A6L189_BACV8 Putative uncharacterized protein OS=Bacte... 35 2.5 tr|B6W1B7|B6W1B7_9BACE Putative uncharacterized protein OS=Bacte... 35 2.5 tr|Q8QRN2|Q8QRN2_9VIRU Nucleocapsid OS=Hantavirus sp. PE=4 SV=1 34 4.1 tr|Q8QRM8|Q8QRM8_9VIRU Nucleocapsid OS=Maciel virus PE=4 SV=1 34 4.1 tr|Q8QRM7|Q8QRM7_9VIRU Nucleocapsid OS=Pergamino virus PE=4 SV=1 34 4.1 tr|Q80DP9|Q80DP9_9VIRU Nucleoprotein OS=Andes virus PE=4 SV=1 34 4.1 tr|O36435|O36435_9VIRU Nucleocapsid protein (Fragment) OS=Andes ... 34 4.1 tr|O36434|O36434_9VIRU Nucleocapsid protein (Fragment) OS=Andes ... 34 4.1 tr|O36307|O36307_9VIRU Nucleoprotein (Nucleocapsid protein) OS=A... 34 4.1 tr|Q99BK5|Q99BK5_9VIRU Nucleocapsid protein OS=Andes virus PE=4 ... 33 5.3 tr|Q8QRN3|Q8QRN3_9VIRU Nucleocapsid OS=Hantavirus sp. PE=4 SV=1 33 5.3 tr|Q8QRN1|Q8QRN1_9VIRU Nucleocapsid OS=Bermejo virus PE=4 SV=1 33 5.3 tr|Q8QRN0|Q8QRN0_9VIRU Nucleocapsid OS=Lechiguanas virus PE=4 SV=1 33 5.3 tr|Q8QRM9|Q8QRM9_9VIRU Nucleocapsid OS=Oran virus PE=4 SV=1 33 5.3 tr|Q4G3H0|Q4G3H0_9VIRU Nucleocapsid protein (Fragment) OS=Arauca... 33 5.3 tr|Q4G3G8|Q4G3G8_9VIRU Nucleocapsid protein OS=Araucaria virus P... 33 5.3 tr|Q4G3G5|Q4G3G5_9VIRU Nucleocapsid protein OS=Araucaria virus P... 33 5.3 tr|Q4G3G1|Q4G3G1_9VIRU Nucleocapsid protein (Fragment) OS=Arauca... 33 5.3 tr|Q4G3G0|Q4G3G0_9VIRU Nucleocapsid protein (Fragment) OS=Arauca... 33 5.3 tr|Q2L976|Q2L976_9VIRU Nucleocapsid protein OS=Neembucu hantavir... 33 5.3 tr|Q2L974|Q2L974_9VIRU Nucleocapsid protein OS=Hantavirus strain... 33 5.3 tr|Q2L973|Q2L973_9VIRU Nucleocapsid protein OS=Hantavirus strain... 33 5.3 tr|A8X5C6|A8X5C6_CAEBR CBR-CPT-1 protein OS=Caenorhabditis brigg... 33 5.5 tr|B2JAL6|B2JAL6_NOSP7 TPR repeat-containing protein OS=Nostoc p... 33 7.2
>tr|B8LQP1|B8LQP1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 997
Score = 57.4 bits (137), Expect = 4e-07 Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 10/157 (6%) Frame = -1
Query: 444 FVTMPQVMWDKVLAEWKGQVQTFILK*GVKLVGTGQLSMPLVEKSLVLKDGKATSAFCK- 268 F+ +PQ MW+K+ A G + + + L G G + + L + + +K+G+A K Sbjct: 510 FIALPQFMWEKLFANSPGYIHSLLNGSESILSGKGNMLVYLNDTIMQIKNGEACLVDTKM 569
Query: 267 DLLAPFVVDLYPRSLEAGCHTQIYVFGFNF--SGGRFLLSFGEQYVECSDWESV-----D 109 D+ P ++ ++P S EAG +I G N S RFL+SF Y+ E++ Sbjct: 570 DMRIPKLLSVHPISFEAGYPIEIVACGRNLLQSKYRFLISFHGNYLHYGTCEAIPLGNPG 629
Query: 108 RSHFTAHKIWNSLGNIEVQRVNVFLP--DSETFGPAF 4 S + I++S + + +F+P D FGPAF Sbjct: 630 SSFRSKENIFHSSNH---ESFKIFIPSTDPRLFGPAF 663
>tr|A7NWA8|A7NWA8_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019851001 PE=4 SV=1 Length = 803
Score = 52.4 bits (124), Expect = 1e-05 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 6/153 (3%) Frame = -1
Query: 444 FVTMPQVMWDKVLAEWKGQVQTFILK*GVKLVGTGQLSMPLVEKSL-VLKDGKATSAFCK 268 F+ MP+ MWDK+L + V F+ G L G G + + L V +DG + Sbjct: 364 FIAMPKFMWDKLLEDPASYVHDFVAAPGKMLSGRGNVLVYLNNMIFRVTEDGTSVMKVEV 423
Query: 267 DLLAPFVVDLYPRSLEAGCHTQIYVFGFNF--SGGRFLLSFGEQYVECSDWESVDRSHFT 94 + AP + ++P EAG + G N RFL+SF +Y+ D+ V F Sbjct: 424 KMQAPKLHYVHPNCFEAGKPMEFVACGSNLLRPKFRFLVSFAGKYLS-YDYHVV----FP 478
Query: 93 AHKI-WNSLGNIEVQRVNVFLPDSE--TFGPAF 4 KI ++ G+++ + +++P +E FGPAF Sbjct: 479 RGKIEGDTAGSLDHEFCKIYIPHTEPNAFGPAF 511
>tr|B8AY86|B8AY86_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19936 PE=4 SV=1 Length = 934
Score = 47.0 bits (110), Expect = 5e-04 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 11/158 (6%) Frame = -1
Query: 444 FVTMPQVMWDKVLAEWKGQVQTFILK*GVKLVGTGQLSMPLVEKSL-VLKDGKATSAFCK 268 FV MPQ MWDK+ + V++ + L+G G + + VLKDG ++ Sbjct: 475 FVAMPQHMWDKLSEDTGNLVKSLVNAPNSLLLGKGAFFIHVNNMIFQVLKDGATLTSTRL 534
Query: 267 DLLAPFVVDLYPRSLEAGCHTQIYVFGFNFSGGRF--LLSFGEQYVECSDWESVDRSHFT 94 ++ +P + ++P EAG + + G + +F L+SF Y++ D Sbjct: 535 EVQSPRIHYVHPSWFEAGKPIDLILCGSSLDQPKFRSLVSFDGLYLK------HDCRRIL 588
Query: 93 AHKIWNSLGN--------IEVQRVNVFLPDSETFGPAF 4 +H+ ++ +G+ E+ R+N+ +T GPAF Sbjct: 589 SHETFDCIGSGEHILDSQHEIFRINITTSKLDTHGPAF 626
>tr|A3B3Y6|A3B3Y6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017758 PE=4 SV=1 Length = 898
Score = 47.0 bits (110), Expect = 5e-04 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 11/158 (6%) Frame = -1
Query: 444 FVTMPQVMWDKVLAEWKGQVQTFILK*GVKLVGTGQLSMPLVEKSL-VLKDGKATSAFCK 268 FV MPQ MWDK+ + V++ + L+G G + + VLKDG ++ Sbjct: 485 FVAMPQHMWDKLSEDTGNLVKSLVNAPNSLLLGKGAFFIHVNNMIFQVLKDGATLTSTRL 544
Query: 267 DLLAPFVVDLYPRSLEAGCHTQIYVFGFNFSGGRF--LLSFGEQYVECSDWESVDRSHFT 94 ++ +P + ++P EAG + + G + +F L+SF Y++ D Sbjct: 545 EVQSPRIHYVHPSWFEAGKPIDLILCGSSLDQPKFRSLVSFDGLYLK------HDCRRIL 598
Query: 93 AHKIWNSLGN--------IEVQRVNVFLPDSETFGPAF 4 +H+ ++ +G+ E+ R+N+ +T GPAF Sbjct: 599 SHETFDCIGSGEHILDSQHEIFRINITTSKLDTHGPAF 636
>tr|B1LSG6|B1LSG6_METRJ Bacteriochlorophyll/chlorophyll synthetase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=Mrad2831_1852 PE=4 SV=1 Length = 294
Score = 37.0 bits (84), Expect = 0.48 Identities = 20/67 (29%), Positives = 36/67 (53%) Frame = -2
Query: 272 VKICWPHL*WIFTLVV*RQAATHRFMSLVSIFLEEGSYYLLENNMWNAVIGNQSTGLISL 93 V +C+ L W V A R + LV++ G++ ++ N + +V G++ GL+SL Sbjct: 144 VALCYEGLPWFTGAAVMAAALPDRRVLLVALLYAAGAHGIMTLNDFKSVEGDRRMGLLSL 203
Query: 92 PTKFGTA 72 P + G+A Sbjct: 204 PVQMGSA 210
>tr|Q1KUV0|Q1KUV0_9ROSI Putative uncharacterized protein OS=Cleome spinosa PE=4 SV=1 Length = 753
Score = 35.4 bits (80), Expect = 1.4 Identities = 19/57 (33%), Positives = 29/57 (50%) Frame = -1
Query: 444 FVTMPQVMWDKVLAEWKGQVQTFILK*GVKLVGTGQLSMPLVEKSLVLKDGKATSAF 274 F+ MP++MW K+ + + FILK G L G G +++ L L GK +F Sbjct: 364 FIAMPEIMWAKLSKDPVAYLDEFILKPGKMLFGRGSMTVYLNNMIFRLMRGKFLVSF 420
>tr|A6L189|A6L189_BACV8 Putative uncharacterized protein OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=BVU_1777 PE=4 SV=1 Length = 465
Score = 34.7 bits (78), Expect = 2.5 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 5/84 (5%) Frame = -1
Query: 423 MWDKVLAEWKGQVQTFILK*GVKLVGTGQLSMPLVEKSLVLKD-GKATSAFCKDL----L 259 MW K W +L + +G Q V LV ++ GK S+FCK L L Sbjct: 192 MWVKGFHRW-------MLGVAAQWLGQAQDCANAVAPMLVSREQGKRKSSFCKILMPKEL 244
Query: 258 APFVVDLYPRSLEAGCHTQIYVFG 187 P+ +D + + E+GC ++ +FG Sbjct: 245 TPYYIDKFDLTSESGCEQKLSLFG 268
>tr|B6W1B7|B6W1B7_9BACE Putative uncharacterized protein OS=Bacteroides dorei DSM 17855 GN=BACDOR_03306 PE=4 SV=1 Length = 453
Score = 34.7 bits (78), Expect = 2.5 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 5/84 (5%) Frame = -1
Query: 423 MWDKVLAEWKGQVQTFILK*GVKLVGTGQLSMPLVEKSLVLKD-GKATSAFCKDL----L 259 MW K W +L + +G Q V LV ++ GK S+FCK L L Sbjct: 180 MWVKGFHRW-------MLGVAAQWLGQAQDCANAVAPMLVSREQGKRKSSFCKILMPKEL 232
Query: 258 APFVVDLYPRSLEAGCHTQIYVFG 187 P+ +D + + E+GC ++ +FG Sbjct: 233 TPYYIDKFDLTSESGCEQKLSLFG 256
>tr|Q8QRN2|Q8QRN2_9VIRU Nucleocapsid OS=Hantavirus sp. PE=4 SV=1 Length = 428
Score = 33.9 bits (76), Expect = 4.1 Identities = 23/85 (27%), Positives = 40/85 (47%) Frame = -2
Query: 275 FVKICWPHL*WIFTLVV*RQAATHRFMSLVSIFLEEGSYYLLENNMWNAVIGNQSTGLIS 96 F +I PH W+F R T +++ V E G+++ + +M N ++ ++S G Sbjct: 295 FTEIATPHSVWVFACAPDRCPPTALYVAGVP---ELGAFFSILQDMRNTIMASKSVG--- 348
Query: 95 LPTKFGTA*ETLKSRGSMYSYQIRR 21 TA E LK + + Y +RR Sbjct: 349 ------TAEEKLKKKSAFYQSYLRR 367
>tr|Q8QRM8|Q8QRM8_9VIRU Nucleocapsid OS=Maciel virus PE=4 SV=1 Length = 428
Score = 33.9 bits (76), Expect = 4.1 Identities = 23/85 (27%), Positives = 40/85 (47%) Frame = -2
Query: 275 FVKICWPHL*WIFTLVV*RQAATHRFMSLVSIFLEEGSYYLLENNMWNAVIGNQSTGLIS 96 F +I PH W+F R T +++ V E G+++ + +M N ++ ++S G Sbjct: 295 FTEIASPHSVWVFACAPDRCPPTALYVAGVP---ELGAFFAILQDMRNTIMASKSVG--- 348
Query: 95 LPTKFGTA*ETLKSRGSMYSYQIRR 21 TA E LK + + Y +RR Sbjct: 349 ------TAEEKLKKKSAFYQSYLRR 367
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